M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_24545

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_24545 167 3.49 Mlig455_039371

Neo: -

Age: Down-Up-Down

Region-enriched R1: 9.285/0.03543
Region-enriched R4: 5.408/0.00654

 ALPL Mlig455_039371 {REF} {Length: 2314} {Pfam: Alkaline phosphatase [PF00245.22, score=418.8]; Metalloenzyme superfamily [PF01676.20, score=27.6]} {Human: ENSG00000162551, ALPL, alkaline phosphatase, liver/bone/kidney, [RH, Score=412, Expect=8e-139]} {Mouse: ENSMUSG00000028766, Alpl, alkaline phosphatase, liver/bone/kidney, [Score=399, Expect=1e-133]} {Dmel: FBgn0043791, phu, phurba tashi, [RH, Score=340, Expect=2e-110]} {Smed: dd_Smed_v6_8942_0_1, dd_Smed_v6_8942_0_1, [Score=305, Expect=2e-97]} {RNA1509_1767, RNA1509_33825, RNA1509_53310} {RNA1310_13965, RNA1509_1767, RNA1509_33825, RNA1509_53310} {RNA1509_1767, RNA1509_33825, RNA1509_53310, RNA815_5144}

Cumulative graph for MligTC455_24545

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 9.285 2.486 0.00013 0.03543
RegionR2 -2.457 2.486 0.98723 1.00000
RegionR3 -0.146 2.486 0.75164 1.00000
RegionR4 5.408 2.486 0.00056 0.00654
RegionR5 1.103 2.486 0.24365 0.55665
RegionR6 0.909 2.486 0.40860 0.97817
RegionR7 -7.061 2.486 1.00000 1.00000
RegionR8 -7.04 2.486 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -11.166 2.486 0.00632 0.38165
RegenerationR2 -3.927 2.486 0.00646 0.12821
RegenerationR3 -3.671 2.486 0.00181 0.07182
RegenerationR4 -3.692 2.486 0.00147 0.04617
RegenerationR5 -2.645 2.486 0.00778 0.16072
RegenerationR6 -3.545 2.486 0.00116 0.03764
RegenerationBL 4.041 2.486 0.04443 0.24095
RegenerationTP -1.414 2.486 0.99987 1.00000


Genes with expression patterns similar to MligTC455_24545

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_24545 167 3.49 Mlig455_039371

Neo: -

Age: Down-Up-Down

Region-enriched R1: 9.285/0.03543
Region-enriched R4: 5.408/0.00654

 ALPL 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_039371 {REF} {Length: 2314} {Pfam: Alkaline phosphatase [PF00245.22, score=418.8]; Metalloenzyme superfamily [PF01676.20, score=27.6]} {Human: ENSG00000162551, ALPL, alkaline phosphatase, liver/bone/kidney, [RH, Score=412, Expect=8e-139]} {Mouse: ENSMUSG00000028766, Alpl, alkaline phosphatase, liver/bone/kidney, [Score=399, Expect=1e-133]} {Dmel: FBgn0043791, phu, phurba tashi, [RH, Score=340, Expect=2e-110]} {Smed: dd_Smed_v6_8942_0_1, dd_Smed_v6_8942_0_1, [Score=305, Expect=2e-97]} {RNA1509_1767, RNA1509_33825, RNA1509_53310} {RNA1310_13965, RNA1509_1767, RNA1509_33825, RNA1509_53310} {RNA1509_1767, RNA1509_33825, RNA1509_53310, RNA815_5144}
2. MligTC455_44504 282 5.88 Mlig455_048122

Neo: Irradiation

Age: -

Region-specific R4: 5.645

Region-enriched R4: 4.095/0.00000

 1.852 - - - 0.900 0.952 - Mlig455_048122 {REF} {Length: 770} {RNA1509_23014, RNA1509_31538} {RNA1310_48549, RNA1509_23014, RNA1509_31538} {RNA1509_23014, RNA1509_31538, RNA815_33778}
3. MligTC455_18118 25 0.51 Mlig455_034558

Neo: -

Age: -

 AP2S1 1.814 - - - 0.858 0.956 - Mlig455_034558 {REF} {Length: 3398} {TRANSSPLICED} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=204.0]} {Human: ENSG00000042753, AP2S1, adaptor related protein complex 2 subunit sigma 1, [RH, Score=269, Expect=3e-94]} {Mouse: ENSMUSG00000008036, Ap2s1, adaptor-related protein complex 2, sigma 1 subunit, [RH, Score=269, Expect=2e-94]} {Dmel: FBgn0043012, AP-2sigma, Adaptor Protein complex 2, sigma subunit, [RH, Score=265, Expect=7e-93]} {Celegans: WBGene00000157, aps-2, AdaPtin, Small chain (Clathrin associated complex), [RH, Score=268, Expect=2e-94]} {Smed: dd_Smed_v6_3529_0_1, dd_Smed_v6_3529_0_1, [RH, Score=257, Expect=6e-90]} {RNA1509_37240} {RNA1310_34747} {RNA815_7668.1}
4. MligTC455_24685 312 6.49 Mlig455_002532

Neo: Irradiation

Age: Up-Down-Up

Region-specific R4: 4.544

Region-enriched R4: 2.156/0.03459

 PIGW 1.704 - - - 0.952 - 0.752 Mlig455_002532 {REF} {Length: 3093} {Pfam: GWT1 [PF06423.14, score=73.1]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=83.6, Expect=2e-16]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=83.6, Expect=2e-16]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=94.7, Expect=3e-20]} {Dmel: FBgn0035265, PIG-Wb, Phosphatidylinositol glycan anchor biosynthesis class W b, [RH, Score=105, Expect=8e-24]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=102, Expect=7e-23]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=102, Expect=3e-23]} {RNA1509_11371, RNA1509_28644, RNA1509_52821} {RNA1310_8006.1, RNA1509_11371, RNA1509_28644, RNA1509_52821} {RNA1509_11371, RNA1509_28644, RNA1509_52821, RNA815_6043.1}
5. MligTC455_35665 550 11.46 Mlig455_000411

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=0.492

 AC099489.1 1.69 - - - 0.952 - 0.738 Mlig455_000411 {REF} {Length: 12958} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=89.4]; Domain of unknown function (DUF1943) [PF09172.13, score=66.3]; von Willebrand factor type D domain [PF00094.27, score=25.5]} {Human: ENSG00000188897, AC099489.1, vitellogenin, [Score=122, Expect=1e-26]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=74.3, Expect=3e-12]} {Smed: dd_Smed_v6_636_0_1, dd_Smed_v6_636_0_1, [Score=93.6, Expect=3e-18]} {RNA1509_862} {RNA1310_65.2} {RNA815_55}
6. MligTC455_31825 3098 64.55 Mlig455_047151

Neo: -

Age: -

Region-enriched R3: 1.610/0.00965
Region-enriched R4: 1.361/0.04740
Region-enriched R5: 1.152/0.04924

 1.686 - - - 0.967 - 0.719 Mlig455_047151 {REF} {Length: 1650} {Pfam: VDE lipocalin domain [PF07137.13, score=61.0]} {RNA1509_31696, RNA1509_3758, RNA1509_5185} {RNA1310_14334.2, RNA1509_31696, RNA1509_3758, RNA1509_5185} {RNA1509_31696, RNA1509_3758, RNA1509_5185, RNA815_7820}
7. MligTC455_16063 772 16.08 Mlig455_026358, Mlig455_052707

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.372

Region-enriched R3: 2.027/0.00000
Region-enriched R4: 1.354/0.01177

 SLC39A14 1.673 - - - 0.972 - 0.701

Mlig455_026358 {REF} {Length: 2562} {Pfam: ZIP Zinc transporter [PF02535.24, score=177.7]} {Human: ENSG00000104635, SLC39A14, solute carrier family 39 member 14, [Score=187, Expect=4e-53]; ENSG00000196950, SLC39A10, solute carrier family 39 member 10, [Score=179, Expect=3e-48]} {Mouse: ENSMUSG00000022094, Slc39a14, solute carrier family 39 (zinc transporter), member 14, [Score=185, Expect=3e-52]} {Dmel: FBgn0036461, Zip71B, Zinc/iron regulated transporter-related protein 71B, [Score=144, Expect=5e-37]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=161, Expect=3e-44]} {Smed: dd_Smed_v6_8605_0_1, dd_Smed_v6_8605_0_1, [Score=213, Expect=2e-63]} {RNA1509_35963, RNA1509_39667} {RNA1310_11294, RNA1509_39667} {RNA1509_39667, RNA815_5274}

Mlig455_052707 {REF} {Length: 2641} {Pfam: ZIP Zinc transporter [PF02535.24, score=177.7]} {Human: ENSG00000104635, SLC39A14, solute carrier family 39 member 14, [Score=187, Expect=4e-53]; ENSG00000196950, SLC39A10, solute carrier family 39 member 10, [Score=179, Expect=3e-48]} {Mouse: ENSMUSG00000022094, Slc39a14, solute carrier family 39 (zinc transporter), member 14, [Score=185, Expect=3e-52]} {Dmel: FBgn0036461, Zip71B, Zinc/iron regulated transporter-related protein 71B, [Score=144, Expect=5e-37]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=161, Expect=3e-44]} {Smed: dd_Smed_v6_8605_0_1, dd_Smed_v6_8605_0_1, [Score=213, Expect=2e-63]} {RNA1509_35963, RNA1509_50293} {RNA1310_11294, RNA1509_35963, RNA1509_50293} {RNA1509_35963, RNA1509_50293, RNA815_5274}
8. MligTC455_23305 524 10.91 Mlig455_054093

Neo: -

Age: -

Region-enriched R3: 1.848/0.00073
Region-enriched R4: 1.814/0.00794

 CH25H 1.672 - - - 0.953 - 0.719 Mlig455_054093 {REF} {Length: 2052} {Pfam: Fatty acid hydroxylase superfamily [PF04116.15, score=77.6]} {Human: ENSG00000138135, CH25H, cholesterol 25-hydroxylase, [RH, Score=168, Expect=7e-50]} {Mouse: ENSMUSG00000050370, Ch25h, cholesterol 25-hydroxylase, [RH, Score=182, Expect=3e-55]} {Celegans: WBGene00018036, F35C8.5, Cholesterol 25-hydroxylase-like protein, [RH, Score=199, Expect=6e-62]} {RNA1509_13990, RNA1509_16293, RNA1509_2104} {RNA1310_8947, RNA1509_13990, RNA1509_16293, RNA1509_2104} {RNA1509_13990, RNA1509_16293, RNA1509_2104, RNA815_835.1}
9. MligTC455_31857 860 17.93 Mlig455_043857

Neo: -

Age: logFC(26M/2M)=0.436

 TGFBI 1.667 - - - 0.950 - 0.717 Mlig455_043857 {REF} {Length: 3990} {Pfam: Fasciclin domain [PF02469.24, score=44.8]} {Human: ENSG00000120708, TGFBI, transforming growth factor beta induced, [RH, Score=90.9, Expect=3e-18]; ENSG00000133110, POSTN, periostin, [RH, Score=89.0, Expect=1e-17]} {Mouse: ENSMUSG00000035493, Tgfbi, transforming growth factor, beta induced, [RH, Score=94.4, Expect=2e-19]} {Smed: dd_Smed_v6_1088_0_1, dd_Smed_v6_1088_0_1, [RH, Score=164, Expect=7e-42]} {RNA1509_3886} {RNA1310_6423.1, RNA1509_3886} {RNA1509_3886, RNA815_1867}
10. MligTC455_54187 165 3.44 Mlig455_049975

Neo: -

Age: -

 1.66 - - - 0.952 - 0.708 Mlig455_049975 {REF} {Length: 315} {NoTransDecoderORF} {RNA1509_46373} {RNA1310_6806} {RNA815_28523}
11. MligTC455_17677 160 3.33 Mlig455_041523, Mlig455_069400

Neo: Int S/G2/M

Age: -

 0.992 - - - - 0.992 -

Mlig455_041523 {REF} {Length: 473} {RNA1509_40602} {RNA1310_17891} {RNA815_61785}

Mlig455_069400 {REF} {Length: 429} {RNA1509_40602} {RNA1310_17891} {RNA815_61785}
12. MligTC455_03005 58 1.21 Mlig455_004257, Mlig455_004306

Neo: Germline

Age: -

 0.991 - - - 0.991 - -

Mlig455_004257 {REF} {Length: 330} {NoTransDecoderORF} {RNA1509_32444} {RNA1310_45150} {RNA815_10124.1}

Mlig455_004306 {REF} {Length: 257} {NoTransDecoderORF} {RNA1509_32444} {RNA1310_45150} {RNA815_10124.1}
13. MligTC455_24686 285 5.93 Mlig455_002636

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.023

Region-enriched R4: 5.776/0.00000

 PIGW 0.988 - - - 0.988 - - Mlig455_002636 {REF} {Length: 2450} {Pfam: GWT1 [PF06423.14, score=73.2]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=82.8, Expect=4e-16]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=82.8, Expect=4e-16]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=94.4, Expect=5e-20]} {Dmel: FBgn0035265, PIG-Wb, Phosphatidylinositol glycan anchor biosynthesis class W b, [RH, Score=105, Expect=6e-24]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=101, Expect=9e-23]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=101, Expect=5e-23]} {RNA1509_28644} {RNA1310_8006.1} {RNA815_6043.1}
14. MligTC455_40140 389 8.1 Mlig455_051792

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.763

Region-enriched R3: 2.986/0.00398

 0.987 - - - 0.987 - - Mlig455_051792 {REF} {Length: 1593} {Pfam: Glycosyl hydrolases family 16 [PF00722.23, score=63.3]; PAN domain [PF14295.8, score=41.7]; PAN domain [PF00024.28, score=26.2]} {Dmel: FBgn0040322, GNBP2, Gram-negative bacteria binding protein 2, [RH, Score=116, Expect=5e-28]} {RNA1509_3048} {RNA1310_9523} {RNA815_8966}
15. MligTC455_16139 81 1.68 Mlig455_039682, Mlig455_039738

Neo: Irradiation

Age: logFC(26M/2M)=0.361

 PRR9 0.985 - - - 0.985 - -

Mlig455_039682 {REF} {Length: 1246} {RNA1509_48733} {RNA1310_40004} {RNA815_39929}

Mlig455_039738 {REF} {Length: 1922} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.8, Expect=6e-06]} {RNA1509_48733} {RNA1310_40004} {RNA815_39929}
16. MligTC455_11711 12 0.26 Mlig455_056966

Neo: Int S/G2/M

Age: Up-Down-Down

 KCTD1 0.974 - - - - 0.974 - Mlig455_056966 {REF} {Length: 3083} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=65.1, Expect=1e-10]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=65.1, Expect=1e-10]} {RNA1509_2526} {RNA1310_23350.1} {RNA815_19699.2}
17. MligTC455_03079 157 3.27 Mlig455_038516, Mlig455_052234

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.732

Region-enriched R4: 5.623/0.00001
Region-enriched R3: 4.446/0.00001

 0.973 - - - 0.973 - -

Mlig455_038516 {REF} {Length: 1502} {Pfam: Glycolipid 2-alpha-mannosyltransferase [PF01793.18, score=115.3]} {RNA1509_55347} {RNA1310_24586} {RNA815_10520}

Mlig455_052234 {REF} {Length: 1512} {Pfam: Glycolipid 2-alpha-mannosyltransferase [PF01793.18, score=115.3]} {RNA1509_55347} {RNA1310_24586, RNA1509_55347} {RNA1509_55347, RNA815_10520}
18. MligTC455_53968 153 3.19 Mlig455_051460, Mlig455_066690

Neo: -

Age: Down-Up-Down

 0.972 - - - - 0.972 -

Mlig455_051460 {REF} {Length: 1441} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22299, RNA1509_25615} {RNA1310_42484.1, RNA1509_25615} {RNA1509_25615, RNA815_28303.1}

Mlig455_066690 {REF} {Length: 1436} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22299} {RNA1310_42484.1, RNA1509_22299} {RNA1509_22299, RNA815_28303.1}
19. MligTC455_29131 123 2.57 Mlig455_037013

Neo: -

Age: -

Region-enriched R3: 4.542/0.00028
Region-enriched R5: 3.258/0.00981

 0.971 - - - 0.971 - - Mlig455_037013 {REF} {Length: 2178} {RNA1509_47002} {RNA1310_12462.2} {RNA815_6311.1}
20. MligTC455_11214 227 4.72 Mlig455_041296, Mlig455_056196

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.610

Region-enriched R4: 4.997/0.00000

 0.969 - - - 0.969 - -

Mlig455_041296 {REF} {Length: 2230} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=67.8, Expect=1e-11]; ENSMUSG00000071335, Mfsd4b3, major facilitator superfamily domain containing 4B3, [Score=64.7, Expect=8e-11]} {RNA1509_25958} {RNA1310_9369} {RNA815_37361}

Mlig455_056196 {REF} {Length: 2701} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=67.8, Expect=1e-11]; ENSMUSG00000071335, Mfsd4b3, major facilitator superfamily domain containing 4B3, [Score=64.7, Expect=8e-11]} {RNA1509_25958} {RNA1310_9369, RNA1509_25958} {RNA1509_25958, RNA815_37361}
21. MligTC455_20876 19 0.4 Mlig455_023056, Mlig455_026941

Neo: -

Age: Down-Down-Up

 0.969 - - - - 0.969 -

Mlig455_023056 {REF} {Length: 3171} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4218) [PF13960.8, score=28.0]; Transposase family tnp2 [PF02992.16, score=23.7]; Protein of unknown function (DUF1258) [PF06869.14, score=21.9]} {RNA1310_125074} {RNA815_59403}

Mlig455_026941 {REF} {Length: 3181} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4218) [PF13960.8, score=28.0]; Transposase family tnp2 [PF02992.16, score=23.4]; Protein of unknown function (DUF1258) [PF06869.14, score=21.8]} {RNA1310_125074} {RNA815_59403}
22. MligTC455_26907 242 5.05 Mlig455_019220

Neo: -

Age: -

Region-enriched R3: 4.556/0.00000

 F5 0.967 - - - 0.967 - - Mlig455_019220 {REF} {Length: 5657} {Human: ENSG00000198734, F5, coagulation factor V, [Score=75.1, Expect=1e-12]} {RNA1509_28476, RNA1509_31695, RNA1509_39871} {RNA1310_25950, RNA1509_28476, RNA1509_31695, RNA1509_39871} {RNA1509_28476, RNA1509_31695, RNA1509_39871, RNA815_16964}
23. MligTC455_15437 17 0.36 Mlig455_035074

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_035074 {REF} {Length: 1138} {Pfam: PAN domain [PF00024.28, score=31.1]} {RNA1310_131470} {RNA815_24291.1}
24. MligTC455_12517 587 12.23 Mlig455_023517

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-1.412

 0.965 - - - 0.965 - - Mlig455_023517 {REF} {Length: 661} {RNA1509_22223} {RNA1310_60769} {RNA815_31256}
25. MligTC455_31952 223 4.64 Mlig455_023381

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.827

Region-enriched R3: 3.025/0.02384

 0.965 - - - 0.965 - - Mlig455_023381 {REF} {Length: 3446} {Pfam: Protein of unknown function (DUF229) [PF02995.19, score=268.1]; Sulfatase [PF00884.25, score=18.1]} {Dmel: FBgn0038318, CG6236, [Score=280, Expect=2e-84]} {Celegans: WBGene00012762, Y41E3.1, [Score=270, Expect=9e-81]} {Smed: dd_Smed_v6_4842_0_1, dd_Smed_v6_4842_0_1, [Score=206, Expect=4e-58]} {RNA1509_31552} {RNA1310_4186} {RNA815_5600}
26. MligTC455_50078 103 2.15 Mlig455_003163

Neo: -

Age: -

 SLC26A2 0.962 - - - 0.962 - - Mlig455_003163 {REF} {Length: 3142} {Pfam: Sulfate permease family [PF00916.22, score=285.7]; STAS domain [PF01740.23, score=66.5]; STAS domain [PF13466.8, score=26.9]} {Human: ENSG00000155850, SLC26A2, solute carrier family 26 member 2, [Score=313, Expect=1e-95]; ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [Score=306, Expect=8e-93]} {Mouse: ENSMUSG00000034320, Slc26a2, solute carrier family 26 (sulfate transporter), member 2, [Score=313, Expect=1e-95]; ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=311, Expect=1e-94]} {Dmel: FBgn0036770, Prestin, [Score=274, Expect=4e-81]} {Celegans: WBGene00013963, sulp-8, Anion transporter SULP-8a; Anion transporter SULP-8b; SULfate Permease family, [Score=319, Expect=1e-99]} {Smed: dd_Smed_v6_16869_0_1, dd_Smed_v6_16869_0_1, [Score=395, Expect=6e-130]} {RNA1509_41170} {RNA1310_1621.2} {RNA815_14105}
27. MligTC455_37974 443 9.23 Mlig455_055280

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.262

Region-enriched R4: 3.613/0.00002
Region-enriched R5: 2.322/0.00164

 ASAH1 0.961 - - - 0.961 - - Mlig455_055280 {REF} {Length: 1484} {TRANSSPLICED} {Pfam: Linear amide C-N hydrolases, choloylglycine hydrolase family [PF02275.20, score=83.9]; beta subunit of N-acylethanolamine-hydrolyzing acid amidase [PF15508.8, score=40.2]} {Human: ENSG00000104763, ASAH1, N-acylsphingosine amidohydrolase 1, [Score=358, Expect=4e-121]} {Mouse: ENSMUSG00000031591, Asah1, N-acylsphingosine amidohydrolase 1, [Score=350, Expect=1e-118]} {Celegans: WBGene00010769, asah-1, Acid ceramidase, [Score=281, Expect=2e-91]} {RNA1509_14520, RNA1509_40978} {RNA1310_24069.2, RNA1509_14520, RNA1509_40978} {RNA1509_14520, RNA1509_40978, RNA815_9637.1}
28. MligTC455_43082 281 5.85 Mlig455_043748, Mlig455_047477

Neo: -

Age: -

 0.96 - - - - 0.960 -

Mlig455_043748 {REF} {Length: 674} {RNA1509_7484} {RNA1310_67034} {RNA815_1925}

Mlig455_047477 {REF} {Length: 677} {RNA1509_7484} {RNA1310_67034} {RNA815_1925}
29. MligTC455_31969 34 0.72 Mlig455_014054, Mlig455_015584, Mlig455_068454

Neo: -

Age: -

 0.959 - - - - 0.959 -

Mlig455_014054 {REF} {Length: 818} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=42.9]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_14744.1}

Mlig455_015584 {REF} {Length: 437} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=60.2]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_15609}

Mlig455_068454 {REF} {Length: 2985} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=115.8]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=55.8, Expect=1e-09]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_14744.1}
30. MligTC455_21878 777 16.19 Mlig455_005870

Neo: -

Age: logFC(26M/2M)=-1.101

 TRPM1 0.958 - - - - 0.958 - Mlig455_005870 {REF} {Length: 5568} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=44.1]; Ankyrin repeats (many copies) [PF13637.8, score=38.2]; Ion transport protein [PF00520.33, score=36.8]; Ankyrin repeats (many copies) [PF13857.8, score=36.7]; Ankyrin repeat [PF13606.8, score=26.0]; Ankyrin repeat [PF00023.32, score=25.0]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=74.7, Expect=8e-13]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=59.7, Expect=2e-08]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=70.1, Expect=1e-11]} {Smed: dd_Smed_v6_17981_0_1, dd_Smed_v6_17981_0_1, [Score=93.6, Expect=7e-19]} {RNA1509_43082, RNA1509_7199} {RNA1310_2221.1, RNA1509_43082, RNA1509_7199} {RNA1509_43082, RNA1509_7199, RNA815_581}
31. MligTC455_42437 135 2.82 Mlig455_046015

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.377

Region-enriched R4: 4.645/0.00175

 0.958 - - - 0.958 - - Mlig455_046015 {REF} {Length: 5259} {Pfam: Pyruvate phosphate dikinase, AMP/ATP-binding domain [PF01326.21, score=155.0]; PEP-utilising enzyme, mobile domain [PF00391.25, score=76.2]} {Celegans: WBGene00011893, T21C9.6, [Score=245, Expect=5e-67]} {Smed: dd_Smed_v6_2604_0_1, dd_Smed_v6_2604_0_1, [Score=591, Expect=0.0]} {RNA1509_11691} {RNA1310_1331} {RNA815_563}
32. MligTC455_20508 826 17.21 Mlig455_004115, Mlig455_060438

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.969

Region-enriched R4: 3.271/0.00000

Regeneration-downregulated R4: -2.295

Regeneration-depleted R4: -2.295

 TTLL10 0.956 - - - 0.956 - -

Mlig455_004115 {REF} {Length: 2879} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=141.9]; YheC/D like ATP-grasp [PF14398.8, score=35.2]; RimK-like ATP-grasp domain [PF08443.13, score=20.3]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=166, Expect=6e-43]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=176, Expect=1e-46]} {Dmel: FBgn0031853, TTLL3B, Tubulin tyrosine ligase-like 3B, [Score=108, Expect=3e-24]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [Score=84.3, Expect=4e-17]} {Smed: dd_Smed_v6_14858_0_1, dd_Smed_v6_14858_0_1, [Score=185, Expect=2e-51]} {RNA1509_2026, RNA1509_39022} {RNA1310_7186, RNA1509_2026, RNA1509_39022} {RNA1509_2026, RNA1509_39022, RNA815_863}

Mlig455_060438 {REF} {Length: 2810} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=138.8]; YheC/D like ATP-grasp [PF14398.8, score=35.0]; RimK-like ATP-grasp domain [PF08443.13, score=20.0]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=164, Expect=2e-42]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=174, Expect=5e-46]} {Dmel: FBgn0030823, CG8918, [Score=105, Expect=8e-24]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [Score=84.3, Expect=4e-17]} {Smed: dd_Smed_v6_14858_0_1, dd_Smed_v6_14858_0_1, [Score=184, Expect=4e-51]} {RNA1509_2026} {RNA1310_7186} {RNA815_863}
33. MligTC455_22145 125 2.6 Mlig455_016022

Neo: -

Age: Down-Up-Down

 XDH 0.955 - - - 0.955 - - Mlig455_016022 {REF} {Length: 5213} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=235.6]; [2Fe-2S] binding domain [PF01799.22, score=95.9]; FAD binding domain in molybdopterin dehydrogenase [PF00941.23, score=92.7]; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain [PF01315.24, score=77.2]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.19, score=69.0]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=25.1]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=347, Expect=2e-100]; ENSG00000138356, AOX1, aldehyde oxidase 1, [Score=346, Expect=3e-100]} {Mouse: ENSMUSG00000038242, Aox4, aldehyde oxidase 4, [Score=363, Expect=1e-106]; ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=357, Expect=3e-104]} {Dmel: FBgn0267408, AOX1, Aldehyde oxidase 1, [Score=532, Expect=3e-169]} {Celegans: WBGene00010083, xhd-1, [Score=357, Expect=2e-104]} {RNA1509_325} {RNA1310_1603.1} {RNA815_224.1}
34. MligTC455_15444 111 2.31 Mlig455_038492

Neo: -

Age: logFC(26M/2M)=-0.705

 0.952 - - - - 0.952 - Mlig455_038492 {REF} {Length: 2384} {TRANSSPLICED} {Pfam: RNA repair pathway DNA polymerase beta family [PF10127.11, score=23.4]} {RNA1509_39460} {RNA1310_16073.2} {RNA815_42346}
35. MligTC455_20336 21 0.44 Mlig455_015470

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_015470 {REF} {Length: 3041} {RNA1509_50783} {RNA1310_50785} {RNA815_44116}
36. MligTC455_49771 61 1.26 Mlig455_018423

Neo: -

Age: -

 0.952 - - - 0.952 - - Mlig455_018423 {REF} {Length: 2813} {RNA1509_25822} {RNA1310_57791} {RNA815_29848}
37. MligTC455_11931 892 18.58 Mlig455_023269

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_023269 {REF} {Length: 1891} {RNA1509_48039} {RNA1310_25334} {RNA815_22354}
38. MligTC455_13367 35 0.74 Mlig455_013408, Mlig455_013449

Neo: -

Age: Up-Up-Down

Region-enriched R5: 5.012/0.00022

 PLSCR1 0.951 - - - - - 0.951

Mlig455_013408 {REF} {Length: 1203} {Pfam: Scramblase [PF03803.17, score=113.6]} {Human: ENSG00000188313, PLSCR1, phospholipid scramblase 1, [Score=90.5, Expect=2e-20]} {Mouse: ENSMUSG00000074139, 1700057G04Rik, RIKEN cDNA 1700057G04 gene, [Score=80.9, Expect=2e-17]} {Celegans: WBGene00014200, scrm-2, Phospholipid scramblase, [Score=112, Expect=4e-29]} {Smed: dd_Smed_v6_4899_0_1, dd_Smed_v6_4899_0_1, [Score=101, Expect=4e-25]} {RNA1509_53352} {RNA1310_33985, RNA1509_53352} {RNA1509_53352, RNA815_19305}

Mlig455_013449 {REF} {Length: 994} {Pfam: Scramblase [PF03803.17, score=66.8]} {Human: ENSG00000188313, PLSCR1, phospholipid scramblase 1, [Score=53.9, Expect=9e-08]} {Mouse: ENSMUSG00000074139, 1700057G04Rik, RIKEN cDNA 1700057G04 gene, [Score=47.4, Expect=6e-06]} {Celegans: WBGene00014200, scrm-2, Phospholipid scramblase, [Score=85.1, Expect=4e-19]} {Smed: dd_Smed_v6_4899_0_1, dd_Smed_v6_4899_0_1, [Score=68.2, Expect=5e-13]} {RNA1509_53352} {RNA1310_33985} {RNA815_19305}
39. MligTC455_53925 630 13.13 Mlig455_067693

Neo: -

Age: Up-Down-Down

 MGAM 0.951 - - - 0.951 - - Mlig455_067693 {REF} {Length: 6484} {Pfam: Glycosyl hydrolases family 31 [PF01055.28, score=793.6]; N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase [PF16863.7, score=126.7]; Trefoil (P-type) domain [PF00088.20, score=47.6]; Galactose mutarotase-like [PF13802.8, score=47.5]} {Human: ENSG00000282607, MGAM, maltase-glucoamylase, [RH, Score=985, Expect=0.0]; ENSG00000257335, MGAM, maltase-glucoamylase, [RH, Score=985, Expect=0.0]; ENSG00000090402, SI, sucrase-isomaltase, [RH, Score=952, Expect=0.0]} {Mouse: ENSMUSG00000068587, Mgam, maltase-glucoamylase, [RH, Score=990, Expect=0.0]; ENSMUSG00000027790, Sis, sucrase isomaltase (alpha-glucosidase), [RH, Score=965, Expect=0.0]} {Dmel: FBgn0027588, GCS2alpha, Glucosidase 2 alpha subunit, [Score=201, Expect=2e-52]} {Celegans: WBGene00019895, aagr-2, Acid Alpha Glucosidase Relate, [RH, Score=483, Expect=9e-148]} {Smed: dd_Smed_v6_4668_0_1, dd_Smed_v6_4668_0_1, [Score=475, Expect=2e-145]} {RNA1509_3169, RNA1509_35233, RNA1509_43074} {RNA1310_1135, RNA1509_3169, RNA1509_35233, RNA1509_43074} {RNA1509_3169, RNA1509_35233, RNA1509_43074, RNA815_4014}
40. MligTC455_28727 264 5.5 Mlig455_041032

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.393

Region-enriched R3: 3.411/0.00032

 0.95 - - - 0.950 - - Mlig455_041032 {REF} {Length: 2729} {Pfam: Keratin, high sulfur B2 protein [PF13885.8, score=53.7]} {Dmel: FBgn0052602, Muc12Ea, Mucin 12Ea, [RH, Score=235, Expect=6e-64]} {RNA1509_37634} {RNA1310_40637} {RNA815_35031}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA