Data search
Results for MligTC455_24620
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24620 | 2313 | 48.19 | Mlig455_025234, Mlig455_025630 | Neo: Int S/G2/M Age: Down-Up-Down |
ATXN3 | Mlig455_025234 {REF} {Length: 2158} {Pfam: Josephin [PF02099.19, score=179.2]; Ubiquitin interaction motif [PF02809.22, score=32.1]} {Human: ENSG00000066427, ATXN3, ataxin 3, [RH, Score=275, Expect=1e-90]} {Mouse: ENSMUSG00000021189, Atxn3, ataxin 3, [RH, Score=280, Expect=8e-93]} {Celegans: WBGene00006446, atx-3, Ataxin-3 homolog, [RH, Score=181, Expect=3e-54]} {Smed: dd_Smed_v6_12319_0_1, dd_Smed_v6_12319_0_1, [RH, Score=247, Expect=1e-80]} {RNA1509_13391, RNA1509_47508} {RNA1310_12017.1, RNA1509_13391, RNA1509_47508} {RNA1509_13391, RNA1509_47508, RNA815_4741.1} Mlig455_025630 {REF} {Length: 2198} {Pfam: Josephin [PF02099.19, score=179.3]; Ubiquitin interaction motif [PF02809.22, score=32.0]} {Human: ENSG00000066427, ATXN3, ataxin 3, [RH, Score=276, Expect=4e-91]} {Mouse: ENSMUSG00000021189, Atxn3, ataxin 3, [RH, Score=278, Expect=5e-92]} {Celegans: WBGene00006446, atx-3, Ataxin-3 homolog, [RH, Score=182, Expect=7e-55]} {Smed: dd_Smed_v6_12319_0_1, dd_Smed_v6_12319_0_1, [RH, Score=248, Expect=9e-81]} {RNA1509_25832} {RNA1310_12017.2, RNA1509_25832} {RNA1509_25832, RNA815_4741.1} |
Cumulative graph for MligTC455_24620
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.663 | 5.773 | 0.33565 | 0.98225 | |
| RegionR2 | -0.289 | 5.773 | 0.41818 | 0.81013 | |
| RegionR3 | -0.332 | 5.773 | 0.27951 | 0.82326 | |
| RegionR4 | 0.389 | 5.773 | 0.26381 | 0.56758 | |
| RegionR5 | 0.38 | 5.773 | 0.17028 | 0.43927 | |
| RegionR6 | 0.399 | 5.773 | 0.17292 | 0.73099 | |
| RegionR7 | -0.035 | 5.773 | 0.92140 | 1.00000 | |
| RegionR8 | 0.151 | 5.773 | 0.71220 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.178 | 5.773 | 0.84693 | 1.00000 | |
| RegenerationR2 | -0.123 | 5.773 | 0.72225 | 0.96308 | |
| RegenerationR3 | 0.018 | 5.773 | 0.96114 | 1.00000 | |
| RegenerationR4 | -0.283 | 5.773 | 0.44391 | 0.83899 | |
| RegenerationR5 | -0.461 | 5.773 | 0.18312 | 0.61334 | |
| RegenerationR6 | -0.225 | 5.773 | 0.53239 | 0.82835 | |
| RegenerationBL | -0.571 | 5.773 | 0.13510 | 0.43793 | |
| RegenerationTP | 0.449 | 5.773 | 0.23451 | 0.68038 |
Genes with expression patterns similar to MligTC455_24620
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24620 | 2313 | 48.19 | Mlig455_025234, Mlig455_025630 | Neo: Int S/G2/M Age: Down-Up-Down |
ATXN3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_025234 {REF} {Length: 2158} {Pfam: Josephin [PF02099.19, score=179.2]; Ubiquitin interaction motif [PF02809.22, score=32.1]} {Human: ENSG00000066427, ATXN3, ataxin 3, [RH, Score=275, Expect=1e-90]} {Mouse: ENSMUSG00000021189, Atxn3, ataxin 3, [RH, Score=280, Expect=8e-93]} {Celegans: WBGene00006446, atx-3, Ataxin-3 homolog, [RH, Score=181, Expect=3e-54]} {Smed: dd_Smed_v6_12319_0_1, dd_Smed_v6_12319_0_1, [RH, Score=247, Expect=1e-80]} {RNA1509_13391, RNA1509_47508} {RNA1310_12017.1, RNA1509_13391, RNA1509_47508} {RNA1509_13391, RNA1509_47508, RNA815_4741.1} Mlig455_025630 {REF} {Length: 2198} {Pfam: Josephin [PF02099.19, score=179.3]; Ubiquitin interaction motif [PF02809.22, score=32.0]} {Human: ENSG00000066427, ATXN3, ataxin 3, [RH, Score=276, Expect=4e-91]} {Mouse: ENSMUSG00000021189, Atxn3, ataxin 3, [RH, Score=278, Expect=5e-92]} {Celegans: WBGene00006446, atx-3, Ataxin-3 homolog, [RH, Score=182, Expect=7e-55]} {Smed: dd_Smed_v6_12319_0_1, dd_Smed_v6_12319_0_1, [RH, Score=248, Expect=9e-81]} {RNA1509_25832} {RNA1310_12017.2, RNA1509_25832} {RNA1509_25832, RNA815_4741.1} |
| 2. | MligTC455_20777 | 2906 | 60.55 | Mlig455_004405, Mlig455_037226 | Neo: - Age: logFC(26M/2M)=0.246 Region-enriched R5: 1.972/0.00000 |
0.964 | - | - | - | 0.964 | - | - | Mlig455_004405 {REF} {Length: 1384} {TRANSSPLICED} {RNA1509_28107, RNA1509_30033} {RNA1310_25755.2, RNA1509_28107} {RNA1509_28107, RNA815_25490} Mlig455_037226 {REF} {Length: 1384} {TRANSSPLICED} {RNA1509_30033} {RNA1310_25755.2, RNA1509_30033} {RNA1509_30033, RNA815_25490} |
|
| 3. | MligTC455_23669 | 891 | 18.56 | Mlig455_022955 | Neo: - Age: - |
TNRC6C | 0.959 | - | - | 0.959 | - | - | - | Mlig455_022955 {REF} {Length: 8332} {Pfam: UBA/TS-N domain [PF00627.33, score=32.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.4]} {Human: ENSG00000078687, TNRC6C, trinucleotide repeat containing 6C, [Score=53.1, Expect=3e-06]} {Mouse: ENSMUSG00000025571, Tnrc6c, trinucleotide repeat containing 6C, [Score=52.8, Expect=3e-06]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=59.7, Expect=9e-09]} {RNA1509_42994, RNA1509_53029} {RNA1310_4153.2, RNA1509_53029} {RNA1509_53029, RNA815_2902} |
| 4. | MligTC455_41232 | 366 | 7.62 | Mlig455_033714, Mlig455_033775 | Neo: - Age: - Region-enriched R2: 2.947/0.03505 |
EMC6 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_033714 {REF} {Length: 189} {NoTransDecoderORF} {RNA1509_9650} {RNA1310_23690} {RNA815_43588} Mlig455_033775 {REF} {Length: 1136} {TRANSSPLICED} {Pfam: EMC6 [PF07019.14, score=65.8]} {Human: ENSG00000127774, EMC6, ER membrane protein complex subunit 6, [RH, Score=95.9, Expect=3e-26]} {Mouse: ENSMUSG00000047260, Emc6, ER membrane protein complex subunit 6, [RH, Score=95.9, Expect=2e-26]} {Dmel: FBgn0039259, CG11781, [RH, Score=95.5, Expect=3e-26]} {Celegans: WBGene00017999, emc-6, EMC Endoplasmic Membrane protein Complex (Yeast EMC) homolog, [RH, Score=62.4, Expect=1e-13]} {Smed: dd_Smed_v6_3488_0_1, dd_Smed_v6_3488_0_1, [RH, Score=99.0, Expect=9e-28]} {RNA1509_9650} {RNA1310_23690, RNA1509_9650} {RNA1509_9650, RNA815_24889} |