Data search


search
Exact
Search

Results for MligTC455_24704

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_24704 36939 769.56 Mlig455_016970

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.366

RPS25 Mlig455_016970 {REF} {Length: 511} {TRANSSPLICED} {Pfam: S25 ribosomal protein [PF03297.17, score=152.5]} {Human: ENSG00000280831, RPS25, ribosomal protein S25, [RH, Score=114, Expect=2e-33]; ENSG00000118181, RPS25, ribosomal protein S25, [RH, Score=114, Expect=2e-33]} {Mouse: ENSMUSG00000009927, Rps25, ribosomal protein S25, [RH, Score=129, Expect=4e-40]} {Dmel: FBgn0086472, RpS25, Ribosomal protein S25, [RH, Score=116, Expect=6e-35]} {Celegans: WBGene00004494, rps-25, 40S ribosomal protein S25, [RH, Score=118, Expect=1e-35]} {Smed: dd_Smed_v6_134_0_1, dd_Smed_v6_134_0_1, [RH, Score=107, Expect=2e-31]} {RNA1509_187, RNA1509_2751, RNA1509_294, RNA1509_3257, RNA1509_338} {RNA1310_68879, RNA1509_187, RNA1509_2751, RNA1509_294, RNA1509_3257, RNA1509_338} {RNA1509_187, RNA1509_2751, RNA1509_294, RNA1509_3257, RNA1509_338, RNA815_35134}

Cumulative graph for MligTC455_24704

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.002 9.648 0.99568 1.00000
RegionR2 -0.341 9.648 0.31596 0.70685
RegionR3 0.273 9.648 0.35446 0.88984
RegionR4 -0.141 9.648 0.66342 0.96220
RegionR5 0.056 9.648 0.84768 1.00000
RegionR6 0.146 9.648 0.61858 1.00000
RegionR7 0.202 9.648 0.47708 1.00000
RegionR8 -0.192 9.648 0.53409 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.147 9.648 0.01365 0.49433
RegenerationR2 -0.428 9.648 0.26711 0.71296
RegenerationR3 -0.526 9.648 0.17464 0.61064
RegenerationR4 -0.192 9.648 0.62560 0.92200
RegenerationR5 -0.102 9.648 0.79238 0.98653
RegenerationR6 -0.455 9.648 0.24155 0.58946
RegenerationBL -0.49 9.648 0.14143 0.44842
RegenerationTP -0.23 9.648 0.51590 0.91149


Genes with expression patterns similar to MligTC455_24704

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_24704 36939 769.56 Mlig455_016970

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.366

RPS25 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_016970 {REF} {Length: 511} {TRANSSPLICED} {Pfam: S25 ribosomal protein [PF03297.17, score=152.5]} {Human: ENSG00000280831, RPS25, ribosomal protein S25, [RH, Score=114, Expect=2e-33]; ENSG00000118181, RPS25, ribosomal protein S25, [RH, Score=114, Expect=2e-33]} {Mouse: ENSMUSG00000009927, Rps25, ribosomal protein S25, [RH, Score=129, Expect=4e-40]} {Dmel: FBgn0086472, RpS25, Ribosomal protein S25, [RH, Score=116, Expect=6e-35]} {Celegans: WBGene00004494, rps-25, 40S ribosomal protein S25, [RH, Score=118, Expect=1e-35]} {Smed: dd_Smed_v6_134_0_1, dd_Smed_v6_134_0_1, [RH, Score=107, Expect=2e-31]} {RNA1509_187, RNA1509_2751, RNA1509_294, RNA1509_3257, RNA1509_338} {RNA1310_68879, RNA1509_187, RNA1509_2751, RNA1509_294, RNA1509_3257, RNA1509_338} {RNA1509_187, RNA1509_2751, RNA1509_294, RNA1509_3257, RNA1509_338, RNA815_35134}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA