TomoSeq data search

Data search

Results for MligTC455_24728

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24728

427

8.89

Mlig455_064504

Neo: -

Age: -

Mlig455_064504 {REF} {Length: 4421} {TRANSSPLICED} {Pfam: Aminotransferase class-V [PF00266.21, score=130.8]} {Celegans: WBGene00022195, Y71H2B.5, [RH, Score=563, Expect=0.0]} {Smed: dd_Smed_v6_16438_0_1, dd_Smed_v6_16438_0_1, [RH, Score=533, Expect=1e-174]} {RNA1509_32309, RNA1509_7760} {RNA1310_1776, RNA1509_32309} {RNA1509_32309, RNA815_14346}

Cumulative graph for MligTC455_24728

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.055	3.548	0.36854	1.00000
RegionR2	0.118	3.548	0.82252	1.00000
RegionR3	-0.619	3.548	0.14917	0.65510
RegionR4	0.102	3.548	0.84003	1.00000
RegionR5	0.814	3.548	0.01762	0.08827
RegionR6	-0.107	3.548	0.79875	1.00000
RegionR7	-0.293	3.548	0.61359	1.00000
RegionR8	-1.07	3.548	0.18979	0.78067

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.085	3.548	0.08616	0.78986
RegenerationR2	-0.058	3.548	0.88472	1.00000
RegenerationR3	0.241	3.548	0.62405	0.91787
RegenerationR4	-0.47	3.548	0.34951	0.78020
RegenerationR5	-0.446	3.548	0.26590	0.69730
RegenerationR6	-0.26	3.548	0.59494	0.86607
RegenerationBL	0.752	3.548	0.21697	0.56311
RegenerationTP	0.166	3.548	0.81940	1.00000

Genes with expression patterns similar to MligTC455_24728

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24728	427	8.89	Mlig455_064504	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_064504 {REF} {Length: 4421} {TRANSSPLICED} {Pfam: Aminotransferase class-V [PF00266.21, score=130.8]} {Celegans: WBGene00022195, Y71H2B.5, [RH, Score=563, Expect=0.0]} {Smed: dd_Smed_v6_16438_0_1, dd_Smed_v6_16438_0_1, [RH, Score=533, Expect=1e-174]} {RNA1509_32309, RNA1509_7760} {RNA1310_1776, RNA1509_32309} {RNA1509_32309, RNA815_14346}
2.	MligTC455_24729	428	8.92	Mlig455_066060	Neo: - Age: -		5.94	0.999	0.957	1.000	0.999	0.987	0.998	Mlig455_066060 {REF} {Length: 4449} {TRANSSPLICED} {Pfam: Aminotransferase class-V [PF00266.21, score=135.4]; PP-loop family [PF01171.22, score=48.1]} {Celegans: WBGene00022195, Y71H2B.5, [Score=692, Expect=0.0]} {Smed: dd_Smed_v6_16438_0_2, dd_Smed_v6_16438_0_2, [RH, Score=536, Expect=2e-175]} {RNA1509_51025, RNA1509_7760} {RNA1310_1776, RNA1509_51025, RNA1509_7760} {RNA1509_51025, RNA1509_7760, RNA815_13193}
3.	MligTC455_48362	1815	37.8	Mlig455_053251, Mlig455_065042	Neo: - Age: -	CARS	1.862	-	-	0.960	0.902	-	-	Mlig455_053251 {REF} {Length: 3222} {TRANSSPLICED} {Pfam: tRNA synthetases class I (C) catalytic domain [PF01406.21, score=402.4]; tRNA synthetases class I (M) [PF09334.13, score=23.9]} {Human: ENSG00000278191, CARS, cysteinyl-tRNA synthetase, [RH, Score=608, Expect=0.0]; ENSG00000110619, CARS, cysteinyl-tRNA synthetase, [RH, Score=608, Expect=0.0]} {Mouse: ENSMUSG00000010755, Cars, cysteinyl-tRNA synthetase, [RH, Score=608, Expect=0.0]} {Dmel: FBgn0027091, CysRS, Cysteinyl-tRNA synthetase, [RH, Score=618, Expect=0.0]} {Celegans: WBGene00000800, cars-1, Cysteinyl Amino-acyl tRNA Synthetase, [RH, Score=536, Expect=1e-180]} {Smed: dd_Smed_v6_3750_0_1, dd_Smed_v6_3750_0_1, [RH, Score=660, Expect=0.0]} {RNA1509_20614, RNA1509_8147} {RNA1310_4882, RNA1509_20614} {RNA1509_20614, RNA815_1598} Mlig455_065042 {REF} {Length: 3135} {TRANSSPLICED} {Pfam: tRNA synthetases class I (C) catalytic domain [PF01406.21, score=400.2]; tRNA synthetases class I (M) [PF09334.13, score=23.5]} {Human: ENSG00000278191, CARS, cysteinyl-tRNA synthetase, [RH, Score=602, Expect=0.0]; ENSG00000110619, CARS, cysteinyl-tRNA synthetase, [RH, Score=602, Expect=0.0]} {Mouse: ENSMUSG00000010755, Cars, cysteinyl-tRNA synthetase, [RH, Score=604, Expect=0.0]} {Dmel: FBgn0027091, CysRS, Cysteinyl-tRNA synthetase, [RH, Score=609, Expect=0.0]} {Celegans: WBGene00000800, cars-1, Cysteinyl Amino-acyl tRNA Synthetase, [RH, Score=539, Expect=0.0]} {Smed: dd_Smed_v6_3750_0_1, dd_Smed_v6_3750_0_1, [RH, Score=663, Expect=0.0]} {RNA1509_13798, RNA1509_45508, RNA1509_8147} {RNA1310_4882, RNA1509_13798, RNA1509_45508, RNA1509_8147} {RNA1509_13798, RNA1509_45508, RNA1509_8147, RNA815_1598}
4.	MligTC455_06035	315	6.55	Mlig455_033343	Neo: - Age: -		1.769	0.798	-	0.971	-	-	-	Mlig455_033343 {REF} {Length: 515} {NoTransDecoderORF} {RNA1509_40958} {RNA1310_25752.1} {RNA815_37868}
5.	MligTC455_40061	438	9.12	Mlig455_013986	Neo: - Age: -		1.747	-	-	-	0.962	-	0.785	Mlig455_013986 {REF} {Length: 1256} {TRANSSPLICED} {RNA1509_16175} {RNA1310_25879, RNA1509_16175} {RNA1509_16175, RNA815_4948}
6.	MligTC455_46079	953	19.86	Mlig455_067020	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.283	UFC1	1.729	0.754	-	0.975	-	-	-	Mlig455_067020 {REF} {Length: 2002} {TRANSSPLICED} {Pfam: Ubiquitin-fold modifier-conjugating enzyme 1 [PF08694.13, score=281.3]} {Human: ENSG00000143222, UFC1, ubiquitin-fold modifier conjugating enzyme 1, [RH, Score=286, Expect=4e-100]} {Mouse: ENSMUSG00000062963, Ufc1, ubiquitin-fold modifier conjugating enzyme 1, [RH, Score=282, Expect=8e-99]} {Dmel: FBgn0034061, Ufc1, Ubiquitin-fold modifier conjugating enzyme 1, [RH, Score=284, Expect=1e-99]} {Celegans: WBGene00008041, ufc-1, Ubiquitin-fold modifier-conjugating enzyme 1, [RH, Score=263, Expect=2e-91]} {Smed: dd_Smed_v6_4590_0_1, dd_Smed_v6_4590_0_1, [RH, Score=294, Expect=8e-104]} {RNA1509_20063, RNA1509_49289} {RNA1310_33140, RNA1509_20063, RNA1509_49289} {RNA1509_20063, RNA1509_49289, RNA815_11898}
7.	MligTC455_40391	362	7.54	Mlig455_014644	Neo: Irradiation Age: logFC(26M/2M)=0.393 Region-enriched R5: 2.057/0.00001	FBXL2	1.726	-	-	0.950	-	-	0.776	Mlig455_014644 {REF} {Length: 2850} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=41.5]; F-box domain [PF00646.35, score=30.4]; Leucine Rich repeat [PF13516.8, score=22.2]} {Human: ENSG00000153558, FBXL2, F-box and leucine rich repeat protein 2, [Score=50.4, Expect=5e-06]} {Mouse: ENSMUSG00000032507, Fbxl2, F-box and leucine-rich repeat protein 2, [Score=50.1, Expect=5e-06]} {Dmel: FBgn0052085, CG32085, [Score=48.5, Expect=1e-05]} {RNA1509_21351} {RNA1310_12833} {RNA815_4802.1}
8.	MligTC455_29829	695	14.47	Mlig455_017371	Neo: - Age: -	RPS6KB1	1.683	0.730	-	0.953	-	-	-	Mlig455_017371 {REF} {Length: 5768} {Pfam: Protein kinase domain [PF00069.27, score=226.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=112.9]; Protein kinase C terminal domain [PF00433.26, score=32.7]; Kinase-like [PF14531.8, score=21.9]; Kinetochore Sim4 complex subunit FTA2 [PF13095.8, score=19.2]} {Human: ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [RH, Score=494, Expect=2e-171]; ENSG00000175634, RPS6KB2, ribosomal protein S6 kinase B2, [RH, Score=478, Expect=8e-165]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [RH, Score=494, Expect=9e-171]} {Dmel: FBgn0283472, S6k, Ribosomal protein S6 kinase, [RH, Score=466, Expect=2e-160]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [RH, Score=469, Expect=1e-160]} {Smed: dd_Smed_v6_5658_0_1, dd_Smed_v6_5658_0_1, [RH, Score=469, Expect=1e-161]} {RNA1509_43095, RNA1509_7605} {RNA1310_19244, RNA1509_43095} {RNA1509_43095, RNA815_2217.1}
9.	MligTC455_06036	344	7.17	Mlig455_033356	Neo: - Age: -	PRKAG2	0.974	-	-	0.974	-	-	-	Mlig455_033356 {REF} {Length: 3376} {Pfam: CBS domain [PF00571.30, score=98.5]} {Human: ENSG00000106617, PRKAG2, protein kinase AMP-activated non-catalytic subunit gamma 2, [Score=340, Expect=1e-114]; ENSG00000181929, PRKAG1, protein kinase AMP-activated non-catalytic subunit gamma 1, [Score=340, Expect=2e-114]} {Mouse: ENSMUSG00000028944, Prkag2, protein kinase, AMP-activated, gamma 2 non-catalytic subunit, [Score=346, Expect=7e-114]; ENSMUSG00000067713, Prkag1, protein kinase, AMP-activated, gamma 1 non-catalytic subunit, [Score=339, Expect=1e-114]} {Dmel: FBgn0264357, SNF4Agamma, SNF4/AMP-activated protein kinase gamma subunit, [Score=353, Expect=3e-117]} {Celegans: WBGene00013732, aakg-1, AMP-Activated protein Kinase Gamma subunit, [Score=289, Expect=4e-93]} {Smed: dd_Smed_v6_4877_0_1, dd_Smed_v6_4877_0_1, [Score=298, Expect=2e-98]} {RNA1509_48129} {RNA1310_7406.2} {RNA815_1861}
10.	MligTC455_19128	717	14.94	Mlig455_056112	Neo: Int S/G2/M Age: Up-Down-Down		0.957	-	-	0.957	-	-	-	Mlig455_056112 {REF} {Length: 2270} {TRANSSPLICED} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=50.1, Expect=1e-06]} {RNA1509_35158, RNA1509_40742} {RNA1310_19455.1, RNA1509_35158} {RNA1509_35158, RNA815_22493}
11.	MligTC455_20477	38	0.79	Mlig455_010992	Neo: - Age: Up-Up-Down		0.957	-	-	-	0.957	-	-	Mlig455_010992 {REF} {Length: 886} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_7002} {RNA1310_1775.1} {RNA815_2421}
12.	MligTC455_22440	155	3.23	Mlig455_002697	Neo: - Age: Down-Up-Down Region-enriched R2: 2.861/0.02591		0.957	-	-	-	0.957	-	-	Mlig455_002697 {REF} {Length: 7661} {Pfam: TIR domain [PF13676.8, score=78.8]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=135, Expect=1e-33]} {RNA1509_15248} {RNA1310_4628} {RNA815_1374}
13.	MligTC455_50364	406	8.46	Mlig455_034152	Neo: - Age: -	DUSP22	0.957	-	-	0.957	-	-	-	Mlig455_034152 {REF} {Length: 2987} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=89.5]} {Human: ENSG00000112679, DUSP22, dual specificity phosphatase 22, [RH, Score=119, Expect=1e-32]} {Mouse: ENSMUSG00000069255, Dusp22, dual specificity phosphatase 22, [RH, Score=120, Expect=3e-33]} {Dmel: FBgn0036369, CG10089, [RH, Score=103, Expect=6e-25]} {Celegans: WBGene00006923, vhp-1, Tyrosine-protein phosphatase vhp-1, [Score=85.9, Expect=6e-19]} {Smed: dd_Smed_v6_4044_0_1, dd_Smed_v6_4044_0_1, [RH, Score=110, Expect=1e-28]} {RNA1509_21493} {RNA1310_34562} {RNA815_16504}
14.	MligTC455_38964	433	9.02	Mlig455_049691	Neo: Int S/G2/M Age: Down-Up-Down	SRSF11	0.955	-	-	0.955	-	-	-	Mlig455_049691 {REF} {Length: 4541} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=31.1]} {Human: ENSG00000116754, SRSF11, serine and arginine rich splicing factor 11, [RH, Score=99.4, Expect=2e-21]} {Mouse: ENSMUSG00000032621, Srek1, splicing regulatory glutamine/lysine-rich protein 1, [Score=165, Expect=1e-43]} {Dmel: FBgn0024285, Srp54, [RH, Score=156, Expect=5e-41]} {Celegans: WBGene00004704, rsp-7, Probable splicing factor, arginine/serine-rich 7, [Score=105, Expect=4e-24]} {Smed: dd_Smed_v6_5957_0_1, dd_Smed_v6_5957_0_1, [RH, Score=145, Expect=4e-40]} {RNA1509_27257, RNA1509_48641} {RNA1310_15393, RNA1509_27257, RNA1509_48641} {RNA1509_27257, RNA1509_48641, RNA815_14196}
15.	MligTC455_49551	857	17.85	Mlig455_011653	Neo: - Age: -	MAP3K19	0.95	-	-	0.950	-	-	-	Mlig455_011653 {REF} {Length: 5210} {Pfam: Protein kinase domain [PF00069.27, score=148.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=130.0]; Caspase domain [PF00656.24, score=120.8]; Ankyrin repeats (3 copies) [PF12796.9, score=73.2]; Ankyrin repeats (many copies) [PF13857.8, score=57.3]; Ankyrin repeat [PF00023.32, score=47.2]; Ankyrin repeats (many copies) [PF13637.8, score=44.1]; Ankyrin repeat [PF13606.8, score=42.1]; Fungal protein kinase [PF17667.3, score=18.8]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=126, Expect=7e-30]; ENSG00000060237, WNK1, WNK lysine deficient protein kinase 1, [Score=121, Expect=5e-27]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=121, Expect=2e-28]; ENSMUSG00000045962, Wnk1, WNK lysine deficient protein kinase 1, [Score=121, Expect=3e-27]; ENSMUSG00000041245, Wnk3, WNK lysine deficient protein kinase 3, [Score=117, Expect=1e-26]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=109, Expect=3e-24]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=106, Expect=5e-23]} {Smed: dd_Smed_v6_417_0_1, dd_Smed_v6_417_0_1, [Score=101, Expect=2e-23]} {RNA1509_2733, RNA1509_28241} {RNA1310_1474, RNA1509_28241} {RNA1509_28241, RNA815_848}

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