TomoSeq data search

Data search

Results for MligTC455_24772

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_24772	464	9.67	Mlig455_031712	Neo: - Age: -	SOS1	Mlig455_031712 {REF} {Length: 6780} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=111.6]; RasGEF N-terminal motif [PF00618.22, score=75.7]; RhoGEF domain [PF00621.22, score=26.3]} {Human: ENSG00000115904, SOS1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=246, Expect=1e-65]; ENSG00000100485, SOS2, SOS Ras/Rho guanine nucleotide exchange factor 2, [RH, Score=234, Expect=1e-61]} {Mouse: ENSMUSG00000024241, Sos1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=251, Expect=2e-67]} {Dmel: FBgn0001965, Sos, Son of sevenless, [RH, Score=221, Expect=8e-58]} {Celegans: WBGene00004947, sos-1, Son of sevenless homolog, [RH, Score=210, Expect=1e-54]} {Smed: dd_Smed_v6_5212_0_1, dd_Smed_v6_5212_0_1, [RH, Score=187, Expect=7e-48]} {RNA1509_40033, RNA1509_41569, RNA1509_46890, RNA1509_9358} {RNA1310_1170.1, RNA1509_40033, RNA1509_41569, RNA1509_46890} {RNA1509_40033, RNA1509_41569, RNA1509_46890, RNA815_4025}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24772

464

9.67

Mlig455_031712

Neo: -

Age: -

SOS1

Mlig455_031712 {REF} {Length: 6780} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=111.6]; RasGEF N-terminal motif [PF00618.22, score=75.7]; RhoGEF domain [PF00621.22, score=26.3]} {Human: ENSG00000115904, SOS1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=246, Expect=1e-65]; ENSG00000100485, SOS2, SOS Ras/Rho guanine nucleotide exchange factor 2, [RH, Score=234, Expect=1e-61]} {Mouse: ENSMUSG00000024241, Sos1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=251, Expect=2e-67]} {Dmel: FBgn0001965, Sos, Son of sevenless, [RH, Score=221, Expect=8e-58]} {Celegans: WBGene00004947, sos-1, Son of sevenless homolog, [RH, Score=210, Expect=1e-54]} {Smed: dd_Smed_v6_5212_0_1, dd_Smed_v6_5212_0_1, [RH, Score=187, Expect=7e-48]} {RNA1509_40033, RNA1509_41569, RNA1509_46890, RNA1509_9358} {RNA1310_1170.1, RNA1509_40033, RNA1509_41569, RNA1509_46890} {RNA1509_40033, RNA1509_41569, RNA1509_46890, RNA815_4025}

Cumulative graph for MligTC455_24772

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.5	3.607	0.73810	1.00000
RegionR2	0.456	3.607	0.41798	0.80983
RegionR3	0.336	3.607	0.44943	0.96133
RegionR4	-0.212	3.607	0.70336	0.99149
RegionR5	-0.524	3.607	0.24436	0.55737
RegionR6	0.045	3.607	0.92260	1.00000
RegionR7	0.076	3.607	0.90621	1.00000
RegionR8	0.323	3.607	0.69882	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.072	3.607	0.55914	1.00000
RegenerationR2	0.367	3.607	0.40632	0.81787
RegenerationR3	0.383	3.607	0.43445	0.82371
RegenerationR4	0.149	3.607	0.77035	0.97676
RegenerationR5	0.653	3.607	0.15730	0.57841
RegenerationR6	0.652	3.607	0.20041	0.54102
RegenerationBL	0.813	3.607	0.15497	0.47093
RegenerationTP	0.367	3.607	0.58659	0.95385

Genes with expression patterns similar to MligTC455_24772

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24772	464	9.67	Mlig455_031712	Neo: - Age: -	SOS1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_031712 {REF} {Length: 6780} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=111.6]; RasGEF N-terminal motif [PF00618.22, score=75.7]; RhoGEF domain [PF00621.22, score=26.3]} {Human: ENSG00000115904, SOS1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=246, Expect=1e-65]; ENSG00000100485, SOS2, SOS Ras/Rho guanine nucleotide exchange factor 2, [RH, Score=234, Expect=1e-61]} {Mouse: ENSMUSG00000024241, Sos1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=251, Expect=2e-67]} {Dmel: FBgn0001965, Sos, Son of sevenless, [RH, Score=221, Expect=8e-58]} {Celegans: WBGene00004947, sos-1, Son of sevenless homolog, [RH, Score=210, Expect=1e-54]} {Smed: dd_Smed_v6_5212_0_1, dd_Smed_v6_5212_0_1, [RH, Score=187, Expect=7e-48]} {RNA1509_40033, RNA1509_41569, RNA1509_46890, RNA1509_9358} {RNA1310_1170.1, RNA1509_40033, RNA1509_41569, RNA1509_46890} {RNA1509_40033, RNA1509_41569, RNA1509_46890, RNA815_4025}
2.	MligTC455_35440	1122	23.37	Mlig455_052909	Neo: - Age: -	QDPR	0.961	-	-	0.961	-	-	-	Mlig455_052909 {REF} {Length: 2094} {TRANSSPLICED} {Pfam: Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=38.6]; short chain dehydrogenase [PF00106.27, score=36.0]; NAD dependent epimerase/dehydratase family [PF01370.23, score=24.1]} {Human: ENSG00000151552, QDPR, quinoid dihydropteridine reductase, [RH, Score=251, Expect=1e-83]} {Mouse: ENSMUSG00000015806, Qdpr, quinoid dihydropteridine reductase, [RH, Score=252, Expect=2e-84]} {Dmel: FBgn0035964, Dhpr, Dihydropteridine reductase, [RH, Score=228, Expect=2e-75]} {Celegans: WBGene00011398, qdpr-1, Quinoid DihydroPteridine Reductase, [RH, Score=229, Expect=8e-76]} {Smed: dd_Smed_v6_2408_0_1, dd_Smed_v6_2408_0_1, [RH, Score=206, Expect=6e-67]} {RNA1509_34523, RNA1509_45435, RNA1509_45615} {RNA1310_38321, RNA1509_34523, RNA1509_45435, RNA1509_45615} {RNA1509_34523, RNA1509_45435, RNA1509_45615, RNA815_16298}
3.	MligTC455_51527	779	16.22	Mlig455_020582	Neo: - Age: logFC(26M/2M)=0.260 Region-enriched R5: 1.635/0.00251	PPP1R3C	0.959	-	-	-	0.959	-	-	Mlig455_020582 {REF} {Length: 2357} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=91.5]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=57.8]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [RH, Score=116, Expect=2e-29]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [RH, Score=110, Expect=1e-27]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=110, Expect=2e-27]} {Smed: dd_Smed_v6_1526_0_1, dd_Smed_v6_1526_0_1, [RH, Score=93.2, Expect=2e-21]} {RNA1509_25707, RNA1509_35381} {RNA1310_14103, RNA1509_25707, RNA1509_35381} {RNA1509_25707, RNA1509_35381, RNA815_5179}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_24772

464

9.67

Mlig455_031712

Neo: -

Age: -

SOS1

1.000

MligTC455_35440

1122

23.37

Mlig455_052909

Neo: -

Age: -

QDPR

0.961

Mlig455_052909 {REF} {Length: 2094} {TRANSSPLICED} {Pfam: Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=38.6]; short chain dehydrogenase [PF00106.27, score=36.0]; NAD dependent epimerase/dehydratase family [PF01370.23, score=24.1]} {Human: ENSG00000151552, QDPR, quinoid dihydropteridine reductase, [RH, Score=251, Expect=1e-83]} {Mouse: ENSMUSG00000015806, Qdpr, quinoid dihydropteridine reductase, [RH, Score=252, Expect=2e-84]} {Dmel: FBgn0035964, Dhpr, Dihydropteridine reductase, [RH, Score=228, Expect=2e-75]} {Celegans: WBGene00011398, qdpr-1, Quinoid DihydroPteridine Reductase, [RH, Score=229, Expect=8e-76]} {Smed: dd_Smed_v6_2408_0_1, dd_Smed_v6_2408_0_1, [RH, Score=206, Expect=6e-67]} {RNA1509_34523, RNA1509_45435, RNA1509_45615} {RNA1310_38321, RNA1509_34523, RNA1509_45435, RNA1509_45615} {RNA1509_34523, RNA1509_45435, RNA1509_45615, RNA815_16298}

MligTC455_51527

779

16.22

Mlig455_020582

Neo: -

Age: logFC(26M/2M)=0.260

Region-enriched R5: 1.635/0.00251

PPP1R3C

0.959

Mlig455_020582 {REF} {Length: 2357} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=91.5]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=57.8]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [RH, Score=116, Expect=2e-29]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [RH, Score=110, Expect=1e-27]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=110, Expect=2e-27]} {Smed: dd_Smed_v6_1526_0_1, dd_Smed_v6_1526_0_1, [RH, Score=93.2, Expect=2e-21]} {RNA1509_25707, RNA1509_35381} {RNA1310_14103, RNA1509_25707, RNA1509_35381} {RNA1509_25707, RNA1509_35381, RNA815_5179}