Data search
Results for MligTC455_24779
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24779 | 10019 | 208.73 | Mlig455_048155 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.285 Region-enriched R7: 1.787/0.00003 |
COL12A1 | Mlig455_048155 {REF} {Length: 5329} {Pfam: von Willebrand factor type A domain [PF00092.30, score=327.8]; von Willebrand factor type A domain [PF13519.8, score=124.2]; von Willebrand factor type A domain [PF13768.8, score=65.2]; Trypsin Inhibitor like cysteine rich domain [PF01826.19, score=24.5]} {Human: ENSG00000111799, COL12A1, collagen type XII alpha 1 chain, [Score=87.8, Expect=2e-16]; ENSG00000162510, MATN1, matrilin 1, [Score=85.1, Expect=3e-16]} {Mouse: ENSMUSG00000040533, Matn1, matrilin 1, cartilage matrix protein, [Score=85.1, Expect=3e-16]; ENSMUSG00000032332, Col12a1, collagen, type XII, alpha 1, [Score=81.3, Expect=1e-14]; ENSMUSG00000032572, Col6a4, collagen, type VI, alpha 4, [Score=80.9, Expect=1e-14]} {Smed: dd_Smed_v6_1071_0_1, dd_Smed_v6_1071_0_1, [Score=75.5, Expect=2e-13]} {RNA1509_724} {RNA1310_1588.1} {RNA815_464} |
Cumulative graph for MligTC455_24779
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.301 | 7.665 | 0.57577 | 1.00000 | |
| RegionR2 | -0.35 | 7.665 | 0.43926 | 0.82841 | |
| RegionR3 | -0.131 | 7.665 | 0.73899 | 1.00000 | |
| RegionR4 | -0.872 | 7.665 | 0.05958 | 0.21700 | |
| RegionR5 | -1.027 | 7.665 | 0.01184 | 0.06525 | |
| RegionR6 | -0.091 | 7.665 | 0.81446 | 1.00000 | |
| RegionR7 | 1.787 | 7.665 | 0.00000 | 0.00003 | |
| RegionR8 | 0.383 | 7.665 | 0.38088 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.66 | 7.665 | 0.01026 | 0.44831 | |
| RegenerationR2 | 0.474 | 7.665 | 0.34696 | 0.77985 | |
| RegenerationR3 | 0.757 | 7.665 | 0.13331 | 0.55689 | |
| RegenerationR4 | 0.764 | 7.665 | 0.14519 | 0.57093 | |
| RegenerationR5 | 0.925 | 7.665 | 0.06635 | 0.40588 | |
| RegenerationR6 | 1.044 | 7.665 | 0.03673 | 0.23924 | |
| RegenerationBL | -0.167 | 7.665 | 0.69860 | 1.00000 | |
| RegenerationTP | 0.626 | 7.665 | 0.17072 | 0.60383 |
Genes with expression patterns similar to MligTC455_24779
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24779 | 10019 | 208.73 | Mlig455_048155 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.285 Region-enriched R7: 1.787/0.00003 |
COL12A1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_048155 {REF} {Length: 5329} {Pfam: von Willebrand factor type A domain [PF00092.30, score=327.8]; von Willebrand factor type A domain [PF13519.8, score=124.2]; von Willebrand factor type A domain [PF13768.8, score=65.2]; Trypsin Inhibitor like cysteine rich domain [PF01826.19, score=24.5]} {Human: ENSG00000111799, COL12A1, collagen type XII alpha 1 chain, [Score=87.8, Expect=2e-16]; ENSG00000162510, MATN1, matrilin 1, [Score=85.1, Expect=3e-16]} {Mouse: ENSMUSG00000040533, Matn1, matrilin 1, cartilage matrix protein, [Score=85.1, Expect=3e-16]; ENSMUSG00000032332, Col12a1, collagen, type XII, alpha 1, [Score=81.3, Expect=1e-14]; ENSMUSG00000032572, Col6a4, collagen, type VI, alpha 4, [Score=80.9, Expect=1e-14]} {Smed: dd_Smed_v6_1071_0_1, dd_Smed_v6_1071_0_1, [Score=75.5, Expect=2e-13]} {RNA1509_724} {RNA1310_1588.1} {RNA815_464} |
| 2. | MligTC455_46742 | 12563 | 261.73 | Mlig455_039904 | Neo: - Age: Up-Down-Up Region-enriched R7: 1.615/0.01717 |
WSCD2 | 3.323 | 0.728 | - | 0.778 | 0.982 | - | 0.835 | Mlig455_039904 {REF} {Length: 4962} {Pfam: WSC domain [PF01822.21, score=625.6]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [RH, Score=91.7, Expect=4e-18]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [RH, Score=92.4, Expect=2e-18]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=67.0, Expect=1e-10]} {Celegans: WBGene00009362, F33E2.6, [Score=63.2, Expect=1e-09]} {RNA1509_171, RNA1509_2420} {RNA1310_1445, RNA1509_171, RNA1509_2420} {RNA1509_171, RNA1509_2420, RNA815_405.1} |
| 3. | MligTC455_24744 | 2111 | 43.98 | Mlig455_017071 | Neo: - Age: - |
FIS1 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_017071 {REF} {Length: 1231} {TRANSSPLICED} {Pfam: Fis1 C-terminal tetratricopeptide repeat [PF14853.8, score=64.8]} {Human: ENSG00000214253, FIS1, fission, mitochondrial 1, [RH, Score=107, Expect=1e-29]} {Mouse: ENSMUSG00000019054, Fis1, fission, mitochondrial 1, [RH, Score=106, Expect=1e-29]} {Dmel: FBgn0039969, Fis1, Fission, mitochondrial 1, [Score=71.6, Expect=3e-16]} {Celegans: WBGene00001425, fis-2, Mitochondrial fission 1 protein, [Score=68.9, Expect=2e-15]} {RNA1509_14418, RNA1509_45322} {RNA1310_27852.2, RNA1509_45322} {RNA1509_45322, RNA815_13809} |
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