TomoSeq data search

Data search

Results for MligTC455_24822

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_24822	274	5.70	Mlig455_020143	Neo: - Age: -		Mlig455_020143 {REF} {Length: 1521} {RNA1509_951} {RNA1310_38074, RNA1509_951} {RNA1509_951, RNA815_25730}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_24822

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.395	2.839	0.43765	1.00000
RegionR2	-1.133	2.839	0.18186	0.53286
RegionR3	0.754	2.839	0.20672	0.74682
RegionR4	0.028	2.839	0.96406	1.00000
RegionR5	-2.091	2.839	0.00596	0.03960
RegionR6	-0.562	2.839	0.44601	1.00000
RegionR7	0.613	2.839	0.46110	1.00000
RegionR8	0.995	2.839	0.32766	0.96088

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.901	2.839	0.63732	1.00000
RegenerationR2	0.506	2.839	0.51241	0.87667
RegenerationR3	0.782	2.839	0.31744	0.74610
RegenerationR4	0.727	2.839	0.35715	0.78621
RegenerationR5	1.617	2.839	0.06073	0.39189
RegenerationR6	1.028	2.839	0.22197	0.56640
RegenerationBL	0.44	2.839	0.61015	0.95539
RegenerationTP	0.794	2.839	0.36568	0.80427

Genes with expression patterns similar to MligTC455_24822

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24822	274	5.7	Mlig455_020143	Neo: - Age: -		5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_020143 {REF} {Length: 1521} {RNA1509_951} {RNA1310_38074, RNA1509_951} {RNA1509_951, RNA815_25730}
2.	MligTC455_32608	378	7.88	Mlig455_047029	Neo: - Age: -	CSTF3	0.963	-	-	0.963	-	-	-	Mlig455_047029 {REF} {Length: 3606} {TRANSSPLICED} {Pfam: Suppressor of forked protein (Suf) [PF05843.16, score=264.1]} {Human: ENSG00000176102, CSTF3, cleavage stimulation factor subunit 3, [RH, Score=817, Expect=0.0]} {Mouse: ENSMUSG00000027176, Cstf3, cleavage stimulation factor, 3' pre-RNA, subunit 3, [RH, Score=817, Expect=0.0]} {Dmel: FBgn0003559, su(f), suppressor of forked, [RH, Score=741, Expect=0.0]} {Celegans: WBGene00006307, suf-1, SUppressor-of-Forked (Drosophila) homolog, [RH, Score=634, Expect=0.0]} {Smed: dd_Smed_v6_2751_0_1, dd_Smed_v6_2751_0_1, [RH, Score=852, Expect=0.0]} {RNA1509_46620, RNA1509_51439, RNA1509_6273} {RNA1310_9060, RNA1509_46620, RNA1509_51439} {RNA1509_46620, RNA1509_51439, RNA815_6112}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_24822

274

5.7

Mlig455_020143

Neo: -

Age: -

1.000

Mlig455_020143 {REF} {Length: 1521} {RNA1509_951} {RNA1310_38074, RNA1509_951} {RNA1509_951, RNA815_25730}

MligTC455_32608

378

7.88

Mlig455_047029

Neo: -

Age: -

CSTF3

0.963

Mlig455_047029 {REF} {Length: 3606} {TRANSSPLICED} {Pfam: Suppressor of forked protein (Suf) [PF05843.16, score=264.1]} {Human: ENSG00000176102, CSTF3, cleavage stimulation factor subunit 3, [RH, Score=817, Expect=0.0]} {Mouse: ENSMUSG00000027176, Cstf3, cleavage stimulation factor, 3' pre-RNA, subunit 3, [RH, Score=817, Expect=0.0]} {Dmel: FBgn0003559, su(f), suppressor of forked, [RH, Score=741, Expect=0.0]} {Celegans: WBGene00006307, suf-1, SUppressor-of-Forked (Drosophila) homolog, [RH, Score=634, Expect=0.0]} {Smed: dd_Smed_v6_2751_0_1, dd_Smed_v6_2751_0_1, [RH, Score=852, Expect=0.0]} {RNA1509_46620, RNA1509_51439, RNA1509_6273} {RNA1310_9060, RNA1509_46620, RNA1509_51439} {RNA1509_46620, RNA1509_51439, RNA815_6112}