TomoSeq data search

Data search

Results for MligTC455_24848

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_24848	4	0.09	Mlig455_038623	Neo: - Age: Down-Down-Down	TRPM3	Mlig455_038623 {REF} {Length: 5285} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=43.0]; COMC family [PF03047.16, score=37.2]; Ankyrin repeat [PF13606.8, score=35.1]; Ankyrin repeats (many copies) [PF13637.8, score=33.0]; Domain of unknown function (DUF5099) [PF17025.7, score=29.9]; Ankyrin repeats (many copies) [PF13857.8, score=24.5]; Ion transport protein [PF00520.33, score=23.9]; LysE type translocator [PF01810.20, score=23.8]; FliW protein [PF02623.17, score=21.6]; Ankyrin repeat [PF00023.32, score=21.4]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=99.0, Expect=3e-20]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=95.1, Expect=6e-19]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=94.7, Expect=6e-19]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=100, Expect=1e-20]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=96.3, Expect=1e-19]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=69.7, Expect=1e-11]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=63.5, Expect=9e-10]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=119, Expect=3e-27]} {RNA1509_6015} {RNA1310_1512.1} {RNA815_17753}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24848

0.09

Mlig455_038623

Neo: -

Age: Down-Down-Down

TRPM3

Mlig455_038623 {REF} {Length: 5285} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=43.0]; COMC family [PF03047.16, score=37.2]; Ankyrin repeat [PF13606.8, score=35.1]; Ankyrin repeats (many copies) [PF13637.8, score=33.0]; Domain of unknown function (DUF5099) [PF17025.7, score=29.9]; Ankyrin repeats (many copies) [PF13857.8, score=24.5]; Ion transport protein [PF00520.33, score=23.9]; LysE type translocator [PF01810.20, score=23.8]; FliW protein [PF02623.17, score=21.6]; Ankyrin repeat [PF00023.32, score=21.4]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=99.0, Expect=3e-20]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=95.1, Expect=6e-19]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=94.7, Expect=6e-19]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=100, Expect=1e-20]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=96.3, Expect=1e-19]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=69.7, Expect=1e-11]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=63.5, Expect=9e-10]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=119, Expect=3e-27]} {RNA1509_6015} {RNA1310_1512.1} {RNA815_17753}

Cumulative graph for MligTC455_24848

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_24848

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24848	4	0.09	Mlig455_038623	Neo: - Age: Down-Down-Down	TRPM3	1	-	-	-	-	1.000	-	Mlig455_038623 {REF} {Length: 5285} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=43.0]; COMC family [PF03047.16, score=37.2]; Ankyrin repeat [PF13606.8, score=35.1]; Ankyrin repeats (many copies) [PF13637.8, score=33.0]; Domain of unknown function (DUF5099) [PF17025.7, score=29.9]; Ankyrin repeats (many copies) [PF13857.8, score=24.5]; Ion transport protein [PF00520.33, score=23.9]; LysE type translocator [PF01810.20, score=23.8]; FliW protein [PF02623.17, score=21.6]; Ankyrin repeat [PF00023.32, score=21.4]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=99.0, Expect=3e-20]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=95.1, Expect=6e-19]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=94.7, Expect=6e-19]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=100, Expect=1e-20]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=96.3, Expect=1e-19]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=69.7, Expect=1e-11]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=63.5, Expect=9e-10]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=119, Expect=3e-27]} {RNA1509_6015} {RNA1310_1512.1} {RNA815_17753}
2.	MligTC455_17375	470	9.79	Mlig455_033216	Neo: Germline Age: Up-Down-Up Regeneration-upregulated R3: 4.717 Regeneration-enriched R3: 4.717	AC021097.3	0.98	-	-	-	-	0.980	-	Mlig455_033216 {REF} {Length: 2064} {Human: ENSG00000285480, AC021097.3, novel histone H2B-like protein, [Score=48.5, Expect=2e-07]} {RNA1509_49557, RNA1509_55668} {RNA1310_46328.1, RNA1509_49557, RNA1509_55668} {RNA1509_49557, RNA1509_55668, RNA815_22278}
3.	MligTC455_44077	7	0.14	Mlig455_035516	Neo: - Age: -		0.98	-	-	-	-	0.980	-	Mlig455_035516 {REF} {Length: 289} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_8409} {RNA1310_1062.1} {RNA815_380}
4.	MligTC455_53350	45	0.93	Mlig455_068759	Neo: - Age: Up-Down-Down		0.968	-	-	-	-	0.968	-	Mlig455_068759 {REF} {Length: 1092} {NoTransDecoderORF} {RNA1310_30525} {RNA815_58901}
5.	MligTC455_39592	6	0.12	Mlig455_054026, Mlig455_066498	Neo: - Age: -	ASIC1	0.957	-	-	-	-	0.957	-	Mlig455_054026 {REF} {Length: 1770} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=186.6]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=55.8, Expect=1e-07]; ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [Score=55.8, Expect=1e-07]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=62.4, Expect=8e-10]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=71.2, Expect=7e-13]} {Smed: dd_Smed_v6_15099_0_1, dd_Smed_v6_15099_0_1, [RH, Score=346, Expect=2e-111]} {RNA1310_36498} {RNA815_27728} Mlig455_066498 {REF} {Length: 2713} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=186.6]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=55.8, Expect=1e-07]; ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [Score=55.8, Expect=1e-07]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=62.4, Expect=8e-10]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=71.2, Expect=7e-13]} {Smed: dd_Smed_v6_15099_0_1, dd_Smed_v6_15099_0_1, [RH, Score=346, Expect=2e-111]} {RNA1310_36498} {RNA815_27728}
6.	MligTC455_07282	20	0.42	Mlig455_052433	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_052433 {REF} {Length: 342} {NoTransDecoderORF} {RNA1509_47082} {RNA1310_9596} {RNA815_19128}
7.	MligTC455_26318	134	2.79	Mlig455_024957	Neo: Irradiation Age: -	DNAJB4	0.952	-	-	-	-	0.952	-	Mlig455_024957 {REF} {Length: 6556} {Pfam: DnaJ domain [PF00226.33, score=54.8]} {Human: ENSG00000162616, DNAJB4, DnaJ heat shock protein family (Hsp40) member B4, [Score=58.5, Expect=2e-09]; ENSG00000137094, DNAJB5, DnaJ heat shock protein family (Hsp40) member B5, [Score=58.5, Expect=2e-10]; ENSG00000132002, DNAJB1, DnaJ heat shock protein family (Hsp40) member B1, [Score=57.0, Expect=1e-08]} {Mouse: ENSMUSG00000028035, Dnajb4, DnaJ heat shock protein family (Hsp40) member B4, [Score=61.6, Expect=2e-10]} {Dmel: FBgn0002174, l(2)tid, lethal (2) tumorous imaginal discs, [Score=59.7, Expect=8e-10]} {Celegans: WBGene00001031, dnj-13, DNaJ domain (Prokaryotic heat shock protein), [Score=57.0, Expect=3e-09]} {Smed: dd_Smed_v6_11169_0_1, dd_Smed_v6_11169_0_1, [Score=58.2, Expect=4e-10]} {RNA1509_49462} {RNA1310_5233, RNA1509_49462} {RNA1509_49462, RNA815_38818}
8.	MligTC455_17181	23	0.48	Mlig455_036265, Mlig455_055388	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.189		0.951	-	-	-	-	0.951	-	Mlig455_036265 {REF} {Length: 1043} {Pfam: THAP domain [PF05485.14, score=43.7]} {Mouse: ENSMUSG00000039759, Thap3, THAP domain containing, apoptosis associated protein 3, [Score=46.2, Expect=6e-06]} {Dmel: FBgn0032730, CG10431, [Score=52.0, Expect=1e-07]} {RNA1509_30365} {RNA1310_20272} {RNA815_52972} Mlig455_055388 {REF} {Length: 1047} {Pfam: THAP domain [PF05485.14, score=43.7]} {Mouse: ENSMUSG00000039759, Thap3, THAP domain containing, apoptosis associated protein 3, [Score=46.2, Expect=6e-06]} {Dmel: FBgn0032730, CG10431, [Score=52.0, Expect=1e-07]} {RNA1509_30365} {RNA1310_20272} {RNA815_52972}