Data search
Results for MligTC455_24877
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24877 | 4 | 0.08 | Mlig455_044071 | Neo: - Age: - |
TRMT1 | Mlig455_044071 {REF} {Length: 1962} {TRANSSPLICED} {Pfam: N2,N2-dimethylguanosine tRNA methyltransferase [PF02005.18, score=323.8]; Met-10+ like-protein [PF02475.18, score=24.9]; O-methyltransferase [PF01596.19, score=21.0]; Methyltransferase domain [PF13847.8, score=20.2]} {Human: ENSG00000104907, TRMT1, tRNA methyltransferase 1, [Score=289, Expect=4e-90]} {Mouse: ENSMUSG00000001909, Trmt1, tRNA methyltransferase 1, [Score=310, Expect=5e-98]} {Dmel: FBgn0032430, CG6388, [Score=303, Expect=2e-96]} {Celegans: WBGene00006613, trm-1, tRNA (guanine(26)-N(2))-dimethyltransferase, [Score=271, Expect=6e-85]} {Smed: dd_Smed_v6_10289_0_1, dd_Smed_v6_10289_0_1, [Score=308, Expect=7e-100]} {RNA1509_38572} {RNA1310_16273.1} {RNA815_30497} |
Cumulative graph for MligTC455_24877
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_24877
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24877 | 4 | 0.08 | Mlig455_044071 | Neo: - Age: - |
TRMT1 | 1 | - | - | - | 1.000 | - | - | Mlig455_044071 {REF} {Length: 1962} {TRANSSPLICED} {Pfam: N2,N2-dimethylguanosine tRNA methyltransferase [PF02005.18, score=323.8]; Met-10+ like-protein [PF02475.18, score=24.9]; O-methyltransferase [PF01596.19, score=21.0]; Methyltransferase domain [PF13847.8, score=20.2]} {Human: ENSG00000104907, TRMT1, tRNA methyltransferase 1, [Score=289, Expect=4e-90]} {Mouse: ENSMUSG00000001909, Trmt1, tRNA methyltransferase 1, [Score=310, Expect=5e-98]} {Dmel: FBgn0032430, CG6388, [Score=303, Expect=2e-96]} {Celegans: WBGene00006613, trm-1, tRNA (guanine(26)-N(2))-dimethyltransferase, [Score=271, Expect=6e-85]} {Smed: dd_Smed_v6_10289_0_1, dd_Smed_v6_10289_0_1, [Score=308, Expect=7e-100]} {RNA1509_38572} {RNA1310_16273.1} {RNA815_30497} |
| 2. | MligTC455_14377 | 210 | 4.37 | Mlig455_022946, Mlig455_046360, Mlig455_046393 | Neo: - Age: logFC(26M/2M)=-0.362 Region-enriched R6: 6.942/0.00000 |
0.97 | - | - | - | 0.970 | - | - | Mlig455_022946 {REF} {Length: 170} {NoTransDecoderORF} {tRNA: Arg(ACG), score=72.3} {RNA1509_29923} {RNA1310_14861.1} {RNA815_5114} Mlig455_046360 {REF} {Length: 1953} {tRNA: Arg(ACG), score=72.3} {RNA1509_29923} {RNA1310_13935.1} {RNA815_5114} Mlig455_046393 {REF} {Length: 1824} {tRNA: Arg(ACG), score=72.3} {RNA1509_29923} {RNA1310_14861.1} {RNA815_5114} |
|
| 3. | MligTC455_39406 | 44 | 0.92 | Mlig455_026121 | Neo: - Age: Up-Down-Down |
RBMS1 | 0.969 | - | - | - | 0.969 | - | - | Mlig455_026121 {REF} {Length: 2550} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=40.0]} {Human: ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=106, Expect=1e-24]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=102, Expect=5e-23]; ENSG00000076067, RBMS2, RNA binding motif single stranded interacting protein 2, [Score=102, Expect=4e-23]} {Mouse: ENSMUSG00000026970, Rbms1, RNA binding motif, single stranded interacting protein 1, [Score=110, Expect=4e-26]} {Dmel: FBgn0052423, shep, alan shepard, [Score=84.7, Expect=3e-17]} {Celegans: WBGene00006331, sup-26, SUPpressor, [Score=100, Expect=9e-23]} {Smed: dd_Smed_v6_3832_0_1, dd_Smed_v6_3832_0_1, [RH, Score=105, Expect=9e-25]} {RNA1310_39053} {RNA815_20087} |
| 4. | MligTC455_45814 | 62 | 1.28 | Mlig455_035781 | Neo: - Age: - |
OTX1 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_035781 {REF} {Length: 1786} {Pfam: Homeodomain [PF00046.31, score=69.6]} {Human: ENSG00000115507, OTX1, orthodenticle homeobox 1, [Score=129, Expect=2e-33]} {Mouse: ENSMUSG00000005917, Otx1, orthodenticle homeobox 1, [Score=128, Expect=2e-33]; ENSMUSG00000021848, Otx2, orthodenticle homeobox 2, [Score=122, Expect=2e-32]} {Dmel: FBgn0085369, Drgx, Dorsal root ganglia homeobox, [Score=97.4, Expect=9e-22]} {Celegans: WBGene00006652, ttx-1, Homeodomain protein TTX-1, [Score=114, Expect=1e-28]} {Smed: dd_Smed_v6_15516_0_1, dd_Smed_v6_15516_0_1, [RH, Score=98.2, Expect=2e-22]} {RNA1509_34770} {RNA1310_31442} {RNA815_3742.2} |
| 5. | MligTC455_11339 | 12 | 0.25 | Mlig455_039521 | Neo: - Age: - |
0.962 | - | - | - | 0.962 | - | - | Mlig455_039521 {REF} {Length: 790} {Pfam: DDE superfamily endonuclease [PF13358.8, score=65.5]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=70.9, Expect=2e-14]} {RNA1509_17943} {RNA1310_32892.1} {RNA815_15636} | |
| 6. | MligTC455_15580 | 8 | 0.18 | Mlig455_016128 | Neo: - Age: - |
0.96 | - | - | - | 0.960 | - | - | Mlig455_016128 {REF} {Length: 1492} | |
| 7. | MligTC455_46108 | 13 | 0.28 | Mlig455_003503 | Neo: - Age: - |
0.958 | - | - | - | 0.958 | - | - | Mlig455_003503 {REF} {Length: 2542} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.8]} {Celegans: WBGene00019445, frpr-12, FMRFamide Peptide Receptor family, [Score=48.1, Expect=8e-06]} {Smed: dd_Smed_v6_21110_0_1, dd_Smed_v6_21110_0_1, [Score=202, Expect=8e-61]} {RNA1310_42800} {RNA815_34794} |
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