TomoSeq data search

Data search

Results for MligTC455_24893

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24893

971

20.22

Mlig455_034522

Neo: -

Age: Down-Down-Down

Region-enriched R4: 1.176/0.03631

GPN3

Mlig455_034522 {REF} {Length: 1540} {TRANSSPLICED} {Pfam: Conserved hypothetical ATP binding protein [PF03029.19, score=259.9]; Ribosomal protein L11, N-terminal domain [PF03946.16, score=66.2]; Ribosomal protein L11, RNA binding domain [PF00298.21, score=53.7]} {Human: ENSG00000111231, GPN3, GPN-loop GTPase 3, [RH, Score=326, Expect=1e-109]} {Mouse: ENSMUSG00000029464, Gpn3, GPN-loop GTPase 3, [RH, Score=325, Expect=4e-109]} {Dmel: FBgn0037478, CG2656, [RH, Score=295, Expect=8e-98]} {Celegans: WBGene00013550, Y75B8A.14, [RH, Score=280, Expect=7e-92]} {Smed: dd_Smed_v6_259_0_1, dd_Smed_v6_259_0_1, [RH, Score=229, Expect=6e-74]} {RNA1509_23059, RNA1509_27210} {RNA1310_34060.1, RNA1509_23059, RNA1509_27210} {RNA1509_23059, RNA1509_27210, RNA815_15785}

Cumulative graph for MligTC455_24893

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.603	4.674	0.57118	1.00000
RegionR2	-0.269	4.674	0.53982	0.90855
RegionR3	-0.495	4.674	0.18914	0.72522
RegionR4	1.176	4.674	0.00500	0.03631
RegionR5	0.867	4.674	0.00589	0.03926
RegionR6	0.243	4.674	0.49518	1.00000
RegionR7	0.154	4.674	0.72660	1.00000
RegionR8	-1.072	4.674	0.09467	0.58098

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.031	4.674	0.32139	1.00000
RegenerationR2	-0.055	4.674	0.88046	1.00000
RegenerationR3	0.564	4.674	0.16453	0.59866
RegenerationR4	0.129	4.674	0.75400	0.97063
RegenerationR5	-0.419	4.674	0.24264	0.67619
RegenerationR6	0.239	4.674	0.54099	0.83338
RegenerationBL	0.502	4.674	0.26440	0.62284
RegenerationTP	0.203	4.674	0.70568	1.00000

Genes with expression patterns similar to MligTC455_24893

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24893	971	20.22	Mlig455_034522	Neo: - Age: Down-Down-Down Region-enriched R4: 1.176/0.03631	GPN3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_034522 {REF} {Length: 1540} {TRANSSPLICED} {Pfam: Conserved hypothetical ATP binding protein [PF03029.19, score=259.9]; Ribosomal protein L11, N-terminal domain [PF03946.16, score=66.2]; Ribosomal protein L11, RNA binding domain [PF00298.21, score=53.7]} {Human: ENSG00000111231, GPN3, GPN-loop GTPase 3, [RH, Score=326, Expect=1e-109]} {Mouse: ENSMUSG00000029464, Gpn3, GPN-loop GTPase 3, [RH, Score=325, Expect=4e-109]} {Dmel: FBgn0037478, CG2656, [RH, Score=295, Expect=8e-98]} {Celegans: WBGene00013550, Y75B8A.14, [RH, Score=280, Expect=7e-92]} {Smed: dd_Smed_v6_259_0_1, dd_Smed_v6_259_0_1, [RH, Score=229, Expect=6e-74]} {RNA1509_23059, RNA1509_27210} {RNA1310_34060.1, RNA1509_23059, RNA1509_27210} {RNA1509_23059, RNA1509_27210, RNA815_15785}
2.	MligTC455_24894	874	18.21	Mlig455_034567	Neo: Int S/G2/M Age: -	GPN3	4.801	0.901	0.993	0.984	0.992	0.931	-	Mlig455_034567 {REF} {Length: 1047} {TRANSSPLICED} {Pfam: Conserved hypothetical ATP binding protein [PF03029.19, score=261.2]; CobQ/CobB/MinD/ParA nucleotide binding domain [PF01656.25, score=19.6]; AAA domain [PF13238.8, score=19.5]} {Human: ENSG00000111231, GPN3, GPN-loop GTPase 3, [RH, Score=325, Expect=3e-111]} {Mouse: ENSMUSG00000029464, Gpn3, GPN-loop GTPase 3, [RH, Score=322, Expect=2e-110]} {Dmel: FBgn0037478, CG2656, [RH, Score=293, Expect=2e-99]} {Celegans: WBGene00013550, Y75B8A.14, [RH, Score=279, Expect=7e-94]} {Smed: dd_Smed_v6_5806_0_1, dd_Smed_v6_5806_0_1, [RH, Score=226, Expect=3e-73]} {RNA1509_27210} {RNA1310_34060.1} {RNA815_15785}
3.	MligTC455_38343	1290	26.87	Mlig455_021940	Neo: Int S/G2/M Age: logFC(26M/2M)=0.400 Region-enriched R5: 1.042/0.00235	MRPS18B	1.861	-	-	-	0.892	0.969	-	Mlig455_021940 {REF} {Length: 1817} {TRANSSPLICED} {Human: ENSG00000203624, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000204568, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000229861, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000223775, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000233813, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000226111, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]; ENSG00000227420, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=1e-21]} {Mouse: ENSMUSG00000024436, Mrps18b, mitochondrial ribosomal protein S18B, [RH, Score=88.2, Expect=3e-20]} {Dmel: FBgn0032849, mRpS18B, mitochondrial ribosomal protein S18B, [RH, Score=138, Expect=5e-40]} {Celegans: WBGene00011759, mrps-18B, Mitochondrial Ribosomal Protein, Small, [RH, Score=84.0, Expect=4e-19]} {Smed: dd_Smed_v6_3535_0_1, dd_Smed_v6_3535_0_1, [RH, Score=131, Expect=7e-37]} {RNA1509_17779, RNA1509_41779} {RNA1310_13167, RNA1509_17779, RNA1509_41779} {RNA1509_17779, RNA1509_41779, RNA815_325}
4.	MligTC455_23030	934	19.45	Mlig455_008877, Mlig455_008978	Neo: - Age: - Region-enriched R5: 1.675/0.00034	ZNF613	0.958	-	-	-	0.958	-	-	Mlig455_008877 {REF} {Length: 1145} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=85.6]; C2H2-type zinc finger [PF13894.8, score=77.3]; Zinc-finger double domain [PF13465.8, score=63.0]; Zinc-finger of C2H2 type [PF12874.9, score=36.1]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=35.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=29.1]; C2H2-type zinc finger [PF13912.8, score=23.1]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=20.1]} {Human: ENSG00000176024, ZNF613, zinc finger protein 613, [Score=124, Expect=1e-31]; ENSG00000136866, ZFP37, ZFP37 zinc finger protein, [Score=121, Expect=2e-30]; ENSG00000196597, ZNF782, zinc finger protein 782, [Score=119, Expect=9e-30]; ENSG00000274349, ZNF658, zinc finger protein 658, [Score=118, Expect=3e-29]; ENSG00000188283, ZNF383, zinc finger protein 383, [Score=118, Expect=8e-30]} {Mouse: ENSMUSG00000034800, Zfp661, zinc finger protein 661, [Score=117, Expect=1e-29]; ENSMUSG00000031079, Zfp300, zinc finger protein 300, [Score=117, Expect=4e-29]; ENSMUSG00000099689, Zfp383, zinc finger protein 383, [Score=117, Expect=1e-29]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=116, Expect=7e-29]; ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=116, Expect=4e-29]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=116, Expect=4e-29]; ENSMUSG00000078868, Gm14412, predicted gene 14412, [Score=116, Expect=4e-29]; ENSMUSG00000078869, Gm14409, predicted gene 14409, [Score=115, Expect=1e-29]; ENSMUSG00000037029, Zfp146, zinc finger protein 146, [Score=114, Expect=9e-30]; ENSMUSG00000055202, Zfp811, zinc finger protein 811, [Score=114, Expect=3e-28]; ENSMUSG00000047264, Zfp358, zinc finger protein 358, [Score=114, Expect=3e-28]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=113, Expect=3e-28]; ENSMUSG00000078861, Zfp931, zinc finger protein 931, [Score=112, Expect=1e-28]; ENSMUSG00000091474, 2610021A01Rik, RIKEN cDNA 2610021A01 gene, [Score=112, Expect=3e-27]; ENSMUSG00000078896, Zfp965, zinc finger protein 965, [Score=112, Expect=1e-28]; ENSMUSG00000078879, Zfp973, zinc finger protein 973, [Score=112, Expect=1e-28]; ENSMUSG00000096795, Zfp433, zinc finger protein 433, [Score=112, Expect=1e-27]} {Dmel: FBgn0038301, CG6654, [Score=103, Expect=2e-24]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=105, Expect=2e-25]} {Smed: dd_Smed_v6_7687_0_1, dd_Smed_v6_7687_0_1, [RH, Score=125, Expect=3e-33]} {RNA1509_32989} {RNA1310_30572} {RNA815_32130} Mlig455_008978 {REF} {Length: 1147} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=85.6]; C2H2-type zinc finger [PF13894.8, score=77.3]; Zinc-finger double domain [PF13465.8, score=63.0]; Zinc-finger of C2H2 type [PF12874.9, score=36.1]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=35.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=29.2]; C2H2-type zinc finger [PF13912.8, score=23.1]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=20.1]} {Human: ENSG00000176024, ZNF613, zinc finger protein 613, [Score=124, Expect=1e-31]; ENSG00000136866, ZFP37, ZFP37 zinc finger protein, [Score=121, Expect=2e-30]; ENSG00000196597, ZNF782, zinc finger protein 782, [Score=119, Expect=1e-29]; ENSG00000274349, ZNF658, zinc finger protein 658, [Score=118, Expect=3e-29]; ENSG00000188283, ZNF383, zinc finger protein 383, [Score=118, Expect=8e-30]} {Mouse: ENSMUSG00000031079, Zfp300, zinc finger protein 300, [Score=117, Expect=4e-29]; ENSMUSG00000099689, Zfp383, zinc finger protein 383, [Score=117, Expect=9e-30]; ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=116, Expect=5e-29]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=116, Expect=5e-29]; ENSMUSG00000078868, Gm14412, predicted gene 14412, [Score=116, Expect=4e-29]; ENSMUSG00000034800, Zfp661, zinc finger protein 661, [Score=116, Expect=1e-29]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=116, Expect=7e-29]; ENSMUSG00000078869, Gm14409, predicted gene 14409, [Score=115, Expect=1e-29]; ENSMUSG00000055202, Zfp811, zinc finger protein 811, [Score=114, Expect=3e-28]; ENSMUSG00000047264, Zfp358, zinc finger protein 358, [Score=114, Expect=3e-28]; ENSMUSG00000037029, Zfp146, zinc finger protein 146, [Score=114, Expect=9e-30]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=113, Expect=3e-28]; ENSMUSG00000078896, Zfp965, zinc finger protein 965, [Score=112, Expect=1e-28]; ENSMUSG00000096795, Zfp433, zinc finger protein 433, [Score=112, Expect=1e-27]; ENSMUSG00000078879, Zfp973, zinc finger protein 973, [Score=112, Expect=1e-28]; ENSMUSG00000078861, Zfp931, zinc finger protein 931, [Score=112, Expect=1e-28]; ENSMUSG00000091474, 2610021A01Rik, RIKEN cDNA 2610021A01 gene, [Score=112, Expect=3e-27]} {Dmel: FBgn0038301, CG6654, [Score=102, Expect=2e-24]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=105, Expect=2e-25]} {Smed: dd_Smed_v6_7687_0_1, dd_Smed_v6_7687_0_1, [RH, Score=125, Expect=2e-33]} {RNA1509_32989, RNA1509_47255} {RNA1310_30572, RNA1509_32989, RNA1509_47255} {RNA1509_32989, RNA1509_47255, RNA815_32130}
5.	MligTC455_32753	687	14.31	Mlig455_053740	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.380	SYNRG	0.951	-	-	0.951	-	-	-	Mlig455_053740 {REF} {Length: 4156} {TRANSSPLICED} {Human: ENSG00000274047, SYNRG, synergin gamma, [RH, Score=82.8, Expect=3e-15]; ENSG00000275066, SYNRG, synergin gamma, [RH, Score=82.8, Expect=3e-15]} {Mouse: ENSMUSG00000034940, Synrg, synergin, gamma, [RH, Score=81.3, Expect=5e-15]} {Celegans: WBGene00011218, R10E11.6, [RH, Score=65.5, Expect=6e-11]} {Smed: dd_Smed_v6_8044_0_1, dd_Smed_v6_8044_0_1, [RH, Score=71.2, Expect=2e-12]} {RNA1509_13094} {RNA1310_2948.1} {RNA815_2849}

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