TomoSeq data search

Data search

Results for MligTC455_24913

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_24913	109	2.27	Mlig455_032604	Neo: - Age: -	HECTD1	Mlig455_032604 {REF} {Length: 10975} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=217.4]; Ankyrin repeats (3 copies) [PF12796.9, score=51.2]; Ankyrin repeat [PF13606.8, score=41.0]; Basic tilted helix bundle domain [PF18410.3, score=39.7]; Ankyrin repeats (many copies) [PF13857.8, score=38.1]; Ankyrin repeat [PF00023.32, score=37.2]; Ankyrin repeats (many copies) [PF13637.8, score=35.6]; Mib_herc2 [PF06701.15, score=32.8]; Sad1 / UNC-like C-terminal [PF07738.15, score=25.0]} {Human: ENSG00000092148, HECTD1, HECT domain E3 ubiquitin protein ligase 1, [RH, Score=937, Expect=0.0]} {Mouse: ENSMUSG00000035247, Hectd1, HECT domain E3 ubiquitin protein ligase 1, [RH, Score=940, Expect=0.0]} {Dmel: FBgn0032208, Ufd4, Ubiquitin fusion-degradation 4-like, [RH, Score=694, Expect=0.0]} {Celegans: WBGene00016405, hecd-1, HECtD1 ubiquitin ligase homolog, [RH, Score=502, Expect=3e-143]} {Smed: dd_Smed_v6_2824_0_1, dd_Smed_v6_2824_0_1, [RH, Score=454, Expect=2e-128]} {RNA1509_28889, RNA1509_38115, RNA1509_40959, RNA1509_4306, RNA1509_43977, RNA1509_49424} {RNA1310_217, RNA1509_28889, RNA1509_38115, RNA1509_40959, RNA1509_4306, RNA1509_43977, RNA1509_49424} {RNA1509_28889, RNA1509_38115, RNA1509_40959, RNA1509_4306, RNA1509_43977, RNA1509_49424, RNA815_246}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24913

109

2.27

Mlig455_032604

Neo: -

Age: -

HECTD1

Mlig455_032604 {REF} {Length: 10975} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=217.4]; Ankyrin repeats (3 copies) [PF12796.9, score=51.2]; Ankyrin repeat [PF13606.8, score=41.0]; Basic tilted helix bundle domain [PF18410.3, score=39.7]; Ankyrin repeats (many copies) [PF13857.8, score=38.1]; Ankyrin repeat [PF00023.32, score=37.2]; Ankyrin repeats (many copies) [PF13637.8, score=35.6]; Mib_herc2 [PF06701.15, score=32.8]; Sad1 / UNC-like C-terminal [PF07738.15, score=25.0]} {Human: ENSG00000092148, HECTD1, HECT domain E3 ubiquitin protein ligase 1, [RH, Score=937, Expect=0.0]} {Mouse: ENSMUSG00000035247, Hectd1, HECT domain E3 ubiquitin protein ligase 1, [RH, Score=940, Expect=0.0]} {Dmel: FBgn0032208, Ufd4, Ubiquitin fusion-degradation 4-like, [RH, Score=694, Expect=0.0]} {Celegans: WBGene00016405, hecd-1, HECtD1 ubiquitin ligase homolog, [RH, Score=502, Expect=3e-143]} {Smed: dd_Smed_v6_2824_0_1, dd_Smed_v6_2824_0_1, [RH, Score=454, Expect=2e-128]} {RNA1509_28889, RNA1509_38115, RNA1509_40959, RNA1509_4306, RNA1509_43977, RNA1509_49424} {RNA1310_217, RNA1509_28889, RNA1509_38115, RNA1509_40959, RNA1509_4306, RNA1509_43977, RNA1509_49424} {RNA1509_28889, RNA1509_38115, RNA1509_40959, RNA1509_4306, RNA1509_43977, RNA1509_49424, RNA815_246}

Cumulative graph for MligTC455_24913

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.302	2.004	0.50041	1.00000
RegionR2	-0.042	2.004	0.97867	1.00000
RegionR3	-0.085	2.004	0.89898	1.00000
RegionR4	-0.474	2.004	0.59288	0.90727
RegionR5	-0.144	2.004	0.78198	1.00000
RegionR6	-0.162	2.004	0.81394	1.00000
RegionR7	-1.164	2.004	0.37246	1.00000
RegionR8	0.768	2.004	0.51346	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.261	2.004	0.49137	1.00000
RegenerationR2	1.416	2.004	0.04043	0.33185
RegenerationR3	0.668	2.004	0.36668	0.78128
RegenerationR4	0.777	2.004	0.33825	0.77039
RegenerationR5	0.838	2.004	0.17202	0.60067
RegenerationR6	-0.739	2.004	0.46341	0.78033
RegenerationBL	1.677	2.004	0.12449	0.41929
RegenerationTP	1.674	2.004	0.12156	0.53050

Genes with expression patterns similar to MligTC455_24913

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24913	109	2.27	Mlig455_032604	Neo: - Age: -	HECTD1	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_032604 {REF} {Length: 10975} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=217.4]; Ankyrin repeats (3 copies) [PF12796.9, score=51.2]; Ankyrin repeat [PF13606.8, score=41.0]; Basic tilted helix bundle domain [PF18410.3, score=39.7]; Ankyrin repeats (many copies) [PF13857.8, score=38.1]; Ankyrin repeat [PF00023.32, score=37.2]; Ankyrin repeats (many copies) [PF13637.8, score=35.6]; Mib_herc2 [PF06701.15, score=32.8]; Sad1 / UNC-like C-terminal [PF07738.15, score=25.0]} {Human: ENSG00000092148, HECTD1, HECT domain E3 ubiquitin protein ligase 1, [RH, Score=937, Expect=0.0]} {Mouse: ENSMUSG00000035247, Hectd1, HECT domain E3 ubiquitin protein ligase 1, [RH, Score=940, Expect=0.0]} {Dmel: FBgn0032208, Ufd4, Ubiquitin fusion-degradation 4-like, [RH, Score=694, Expect=0.0]} {Celegans: WBGene00016405, hecd-1, HECtD1 ubiquitin ligase homolog, [RH, Score=502, Expect=3e-143]} {Smed: dd_Smed_v6_2824_0_1, dd_Smed_v6_2824_0_1, [RH, Score=454, Expect=2e-128]} {RNA1509_28889, RNA1509_38115, RNA1509_40959, RNA1509_4306, RNA1509_43977, RNA1509_49424} {RNA1310_217, RNA1509_28889, RNA1509_38115, RNA1509_40959, RNA1509_4306, RNA1509_43977, RNA1509_49424} {RNA1509_28889, RNA1509_38115, RNA1509_40959, RNA1509_4306, RNA1509_43977, RNA1509_49424, RNA815_246}
2.	MligTC455_16421	147	3.07	Mlig455_022618	Neo: - Age: Up-Down-Up		1.866	-	-	-	0.898	-	0.968	Mlig455_022618 {REF} {Length: 2008} {TRANSSPLICED} {RNA1509_46632} {RNA1310_30684} {RNA815_13952}
3.	MligTC455_52353	162	3.38	Mlig455_055362, Mlig455_055421	Neo: - Age: -	PLPP6	0.955	-	-	-	-	0.955	-	Mlig455_055362 {REF} {Length: 3844} {Pfam: PAP2 superfamily [PF01569.23, score=55.4]; PAP2 superfamily [PF14378.8, score=29.9]} {Human: ENSG00000205808, PLPP6, phospholipid phosphatase 6, [RH, Score=75.5, Expect=6e-16]} {Mouse: ENSMUSG00000040105, Plpp6, phospholipid phosphatase 6, [RH, Score=77.0, Expect=1e-16]} {Dmel: FBgn0051717, CG31717, [RH, Score=73.6, Expect=4e-16]} {Celegans: WBGene00020486, T13C5.6, [RH, Score=77.8, Expect=7e-18]} {Smed: dd_Smed_v6_11684_0_1, dd_Smed_v6_11684_0_1, [RH, Score=76.3, Expect=1e-17]} {RNA1509_56728} {RNA1310_61277} {RNA815_16579} Mlig455_055421 {REF} {Length: 3579} {Mouse: ENSMUSG00000040105, Plpp6, phospholipid phosphatase 6, [Score=46.2, Expect=2e-06]} {Smed: dd_Smed_v6_11684_0_1, dd_Smed_v6_11684_0_1, [Score=55.8, Expect=1e-10]} {RNA1509_56728} {RNA1310_61277} {RNA815_16579}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_24913

109

2.27

Mlig455_032604

Neo: -

Age: -

HECTD1

1.000

MligTC455_16421

147

3.07

Mlig455_022618

Neo: -

Age: Up-Down-Up

1.866

0.898

0.968

Mlig455_022618 {REF} {Length: 2008} {TRANSSPLICED} {RNA1509_46632} {RNA1310_30684} {RNA815_13952}

MligTC455_52353

162

3.38

Mlig455_055362, Mlig455_055421

Neo: -

Age: -

PLPP6

0.955

Mlig455_055362 {REF} {Length: 3844} {Pfam: PAP2 superfamily [PF01569.23, score=55.4]; PAP2 superfamily [PF14378.8, score=29.9]} {Human: ENSG00000205808, PLPP6, phospholipid phosphatase 6, [RH, Score=75.5, Expect=6e-16]} {Mouse: ENSMUSG00000040105, Plpp6, phospholipid phosphatase 6, [RH, Score=77.0, Expect=1e-16]} {Dmel: FBgn0051717, CG31717, [RH, Score=73.6, Expect=4e-16]} {Celegans: WBGene00020486, T13C5.6, [RH, Score=77.8, Expect=7e-18]} {Smed: dd_Smed_v6_11684_0_1, dd_Smed_v6_11684_0_1, [RH, Score=76.3, Expect=1e-17]} {RNA1509_56728} {RNA1310_61277} {RNA815_16579}

Mlig455_055421 {REF} {Length: 3579} {Mouse: ENSMUSG00000040105, Plpp6, phospholipid phosphatase 6, [Score=46.2, Expect=2e-06]} {Smed: dd_Smed_v6_11684_0_1, dd_Smed_v6_11684_0_1, [Score=55.8, Expect=1e-10]} {RNA1509_56728} {RNA1310_61277} {RNA815_16579}