TomoSeq data search

Data search

Results for MligTC455_25013

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25013

18

0.37

Mlig455_065968

Neo: -

Age: Down-Down-Up

Regeneration-enriched R3: 7.243
Regeneration-enriched R5: 6.976
Regeneration-enriched R2: 5.285

Mlig455_065968 {REF} {Length: 3920} {Pfam: Receptor family ligand binding region [PF01094.30, score=33.9]} {RNA1509_53738} {RNA1310_5718} {RNA815_6955}

Cumulative graph for MligTC455_25013

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.465	0.815	0.99966	1.00000
RegionR2	5.14	0.815	0.99985	1.00000
RegionR3	0.552	0.815	0.99996	1.00000
RegionR4	-4.554	0.815	0.99968	1.00000
RegionR5	-1.201	0.815	0.99982	1.00000
RegionR6	0.594	0.815	0.99998	1.00000
RegionR7	1.534	0.815	0.99993	1.00000
RegionR8	2.4	0.815	0.99991	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	6.737	0.815	0.99989	1.00000
RegenerationR2	5.285	0.815	0.00003	0.00622
RegenerationR3	7.243	0.815	0.00007	0.00883
RegenerationR4	5.297	0.815	0.00285	0.06998
RegenerationR5	6.976	0.815	0.00001	0.00204
RegenerationR6	4.813	0.815	0.00673	0.10021
RegenerationBL	1.844	0.815	0.99991	1.00000
RegenerationTP	4.957	0.815	0.01561	0.21428

Genes with expression patterns similar to MligTC455_25013

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25013	18	0.37	Mlig455_065968	Neo: - Age: Down-Down-Up Regeneration-enriched R3: 7.243 Regeneration-enriched R5: 6.976 Regeneration-enriched R2: 5.285		2	-	-	-	-	1.000	1.000	Mlig455_065968 {REF} {Length: 3920} {Pfam: Receptor family ligand binding region [PF01094.30, score=33.9]} {RNA1509_53738} {RNA1310_5718} {RNA815_6955}
2.	MligTC455_28262	42	0.87	Mlig455_009098	Neo: - Age: Up-Down-Up, logFC(26M/2M)=2.413		0.969	-	-	-	-	0.969	-	Mlig455_009098 {REF} {Length: 2205} {RNA1310_39210} {RNA815_22102}
3.	MligTC455_07305	45	0.94	Mlig455_022055	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_022055 {REF} {Length: 1195} {Mouse: ENSMUSG00000033088, Triobp, TRIO and F-actin binding protein, [Score=51.6, Expect=4e-07]} {Smed: dd_Smed_v6_1985_0_1, dd_Smed_v6_1985_0_1, [Score=53.1, Expect=5e-08]}
4.	MligTC455_23415	50	1.03	Mlig455_016621	Neo: - Age: Up-Down-Down Region-enriched R2: 5.308/0.00531		0.958	-	-	-	-	0.958	-	Mlig455_016621 {REF} {Length: 6929} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=182.3]; Family of unknown function (DUF5641) [PF18701.3, score=110.2]; Protein of unknown function (DUF1759) [PF03564.17, score=42.8]; Integrase zinc binding domain [PF17921.3, score=42.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.2]} {Smed: dd_Smed_v6_22202_0_1, dd_Smed_v6_22202_0_1, [Score=120, Expect=4e-31]} {RNA1509_14736} {RNA1310_64.1, RNA1509_14736} {RNA1509_14736, RNA815_7101}
5.	MligTC455_28369	31	0.64	Mlig455_057050	Neo: - Age: Down-Down-Up	ADAM8	0.958	-	-	-	-	0.958	-	Mlig455_057050 {REF} {Length: 3660} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=124.6]; Metallo-peptidase family M12 [PF13688.8, score=66.1]; ADAM cysteine-rich [PF08516.14, score=53.8]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=33.7]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=31.6]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=21.6]; Matrixin [PF00413.26, score=20.4]} {Human: ENSG00000151651, ADAM8, ADAM metallopeptidase domain 8, [Score=144, Expect=3e-35]} {Mouse: ENSMUSG00000025473, Adam8, a disintegrin and metallopeptidase domain 8, [Score=129, Expect=2e-30]; ENSMUSG00000050190, Gm5346, predicted gene 5346, [Score=129, Expect=1e-30]; ENSMUSG00000072647, Adam1a, a disintegrin and metallopeptidase domain 1a, [Score=127, Expect=7e-30]; ENSMUSG00000079058, Adam34, a disintegrin and metallopeptidase domain 34, [Score=123, Expect=1e-28]} {Dmel: FBgn0265140, Meltrin, [Score=173, Expect=1e-44]} {Celegans: WBGene00000074, adm-2, ADAM (Disintegrin plus metalloprotease) family, [Score=115, Expect=4e-26]} {Smed: dd_Smed_v6_10958_0_2, dd_Smed_v6_10958_0_2, [Score=113, Expect=4e-26]} {RNA1509_7654} {RNA1310_9319.1} {RNA815_4173.1}
6.	MligTC455_11142	10	0.2	Mlig455_041921	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_041921 {REF} {Length: 2053} {NoTransDecoderORF} {RNA1310_33225.1} {RNA815_38499}
7.	MligTC455_49271	18	0.38	Mlig455_018032	Neo: - Age: Up-Down-Down		0.954	-	-	-	-	0.954	-	Mlig455_018032 {REF} {Length: 1640} {NoTransDecoderORF} {RNA1509_2921} {RNA1310_107498} {RNA815_12938}
8.	MligTC455_18624	4	0.09	Mlig455_018330	Neo: - Age: Down-Up-Down	SPATS1	0.953	-	-	-	-	0.953	-	Mlig455_018330 {REF} {Length: 1361} {TRANSSPLICED} {Pfam: Spermatogenesis-associated serine-rich protein 1 [PF15160.8, score=70.7]} {Human: ENSG00000249481, SPATS1, spermatogenesis associated serine rich 1, [RH, Score=73.9, Expect=1e-14]} {Mouse: ENSMUSG00000023935, Spats1, spermatogenesis associated, serine-rich 1, [RH, Score=72.8, Expect=3e-14]} {Smed: dd_Smed_v6_8305_0_1, dd_Smed_v6_8305_0_1, [RH, Score=211, Expect=3e-68]} {RNA1509_15481} {RNA1310_26555} {RNA815_13979}
9.	MligTC455_39457	23	0.49	Mlig455_005623	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_005623 {REF} {Length: 1989} {RNA1509_44223} {RNA1310_54802} {RNA815_10441.1}
10.	MligTC455_50229	176	3.66	Mlig455_010733	Neo: - Age: -	TAB1	0.951	-	-	-	-	0.951	-	Mlig455_010733 {REF} {Length: 3464} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=20.5]} {Human: ENSG00000100324, TAB1, TGF-beta activated kinase 1 (MAP3K7) binding protein 1, [RH, Score=50.8, Expect=3e-06]} {Mouse: ENSMUSG00000022414, Tab1, TGF-beta activated kinase 1/MAP3K7 binding protein 1, [RH, Score=51.2, Expect=2e-06]} {RNA1509_20706} {RNA1310_18794, RNA1509_20706} {RNA1509_20706, RNA815_17460}
11.	MligTC455_10643	10	0.21	Mlig455_022637	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_022637 {REF} {Length: 691} {NoTransDecoderORF} {RNA1509_15535} {RNA1310_113487} {RNA815_5117}

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