TomoSeq data search

Data search

Results for MligTC455_25053

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_25053	101	2.11	Mlig455_039917	Neo: - Age: logFC(26M/2M)=0.314 Region-enriched R4: 3.248/0.02642 Region-enriched R5: 3.088/0.02057	RNF31	Mlig455_039917 {REF} {Length: 3970} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=93.7]; HOIP UBA domain pair [PF16678.7, score=29.6]; IBR domain, a half RING-finger domain [PF01485.23, score=25.5]; Zn-finger in Ran binding protein and others [PF00641.20, score=23.1]} {Human: ENSG00000092098, RNF31, ring finger protein 31, [Score=210, Expect=4e-56]; ENSG00000285152, RNF31, ring finger protein 31, [Score=210, Expect=4e-56]; ENSG00000284845, AL136295.10, novel transcript, [Score=207, Expect=1e-57]; ENSG00000259529, AL136295.5, novel transcript, [Score=207, Expect=1e-57]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [Score=218, Expect=4e-59]} {Dmel: FBgn0031857, LUBEL, Linear Ubiquitin E3 ligase, [Score=186, Expect=4e-48]} {Smed: dd_Smed_v6_7487_0_1, dd_Smed_v6_7487_0_1, [Score=146, Expect=1e-36]} {RNA1509_12103, RNA1509_45272} {RNA1310_2056.1, RNA1509_45272} {RNA1509_45272, RNA815_897.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25053

101

2.11

Mlig455_039917

Neo: -

Age: logFC(26M/2M)=0.314

Region-enriched R4: 3.248/0.02642
Region-enriched R5: 3.088/0.02057

RNF31

Mlig455_039917 {REF} {Length: 3970} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=93.7]; HOIP UBA domain pair [PF16678.7, score=29.6]; IBR domain, a half RING-finger domain [PF01485.23, score=25.5]; Zn-finger in Ran binding protein and others [PF00641.20, score=23.1]} {Human: ENSG00000092098, RNF31, ring finger protein 31, [Score=210, Expect=4e-56]; ENSG00000285152, RNF31, ring finger protein 31, [Score=210, Expect=4e-56]; ENSG00000284845, AL136295.10, novel transcript, [Score=207, Expect=1e-57]; ENSG00000259529, AL136295.5, novel transcript, [Score=207, Expect=1e-57]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [Score=218, Expect=4e-59]} {Dmel: FBgn0031857, LUBEL, Linear Ubiquitin E3 ligase, [Score=186, Expect=4e-48]} {Smed: dd_Smed_v6_7487_0_1, dd_Smed_v6_7487_0_1, [Score=146, Expect=1e-36]} {RNA1509_12103, RNA1509_45272} {RNA1310_2056.1, RNA1509_45272} {RNA1509_45272, RNA815_897.1}

Cumulative graph for MligTC455_25053

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.333	1.876	1.00000	1.00000
RegionR2	0.498	1.876	0.61216	0.95961
RegionR3	2.172	1.876	0.06928	0.46492
RegionR4	3.248	1.876	0.00332	0.02642
RegionR5	3.088	1.876	0.00249	0.02057
RegionR6	1.137	1.876	0.43366	0.99570
RegionR7	0.761	1.876	0.58012	1.00000
RegionR8	-4.571	1.876	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.023	1.876	0.99985	1.00000
RegenerationR2	1.147	1.876	0.09842	0.49670
RegenerationR3	0.38	1.876	0.61484	0.91491
RegenerationR4	-0.18	1.876	0.83118	0.99765
RegenerationR5	-0.067	1.876	0.91650	1.00000
RegenerationR6	1.582	1.876	0.10732	0.40539
RegenerationBL	1.851	1.876	0.25188	0.60822
RegenerationTP	2.647	1.876	0.20972	0.65189

Genes with expression patterns similar to MligTC455_25053

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25053	101	2.11	Mlig455_039917	Neo: - Age: logFC(26M/2M)=0.314 Region-enriched R4: 3.248/0.02642 Region-enriched R5: 3.088/0.02057	RNF31	5	-	1.000	1.000	1.000	1.000	1.000	Mlig455_039917 {REF} {Length: 3970} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=93.7]; HOIP UBA domain pair [PF16678.7, score=29.6]; IBR domain, a half RING-finger domain [PF01485.23, score=25.5]; Zn-finger in Ran binding protein and others [PF00641.20, score=23.1]} {Human: ENSG00000092098, RNF31, ring finger protein 31, [Score=210, Expect=4e-56]; ENSG00000285152, RNF31, ring finger protein 31, [Score=210, Expect=4e-56]; ENSG00000284845, AL136295.10, novel transcript, [Score=207, Expect=1e-57]; ENSG00000259529, AL136295.5, novel transcript, [Score=207, Expect=1e-57]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [Score=218, Expect=4e-59]} {Dmel: FBgn0031857, LUBEL, Linear Ubiquitin E3 ligase, [Score=186, Expect=4e-48]} {Smed: dd_Smed_v6_7487_0_1, dd_Smed_v6_7487_0_1, [Score=146, Expect=1e-36]} {RNA1509_12103, RNA1509_45272} {RNA1310_2056.1, RNA1509_45272} {RNA1509_45272, RNA815_897.1}
2.	MligTC455_21383	161	3.35	Mlig455_004674	Neo: Germline Age: - Region-enriched R5: 2.691/0.00020 Region-enriched R4: 2.240/0.02605		0.955	-	-	0.955	-	-	-	Mlig455_004674 {REF} {Length: 1137} {TRANSSPLICED} {RNA1509_26693, RNA1509_55729} {RNA1310_30927, RNA1509_26693, RNA1509_55729} {RNA1509_26693, RNA1509_55729, RNA815_14344}
3.	MligTC455_21384	162	3.38	Mlig455_004737	Neo: - Age: Down-Up-Down Region-enriched R5: 2.677/0.00023 Region-enriched R4: 2.213/0.03047		0.955	-	-	0.955	-	-	-	Mlig455_004737 {REF} {Length: 1214} {TRANSSPLICED} {RNA1509_26693} {RNA1310_30927} {RNA815_14344}
4.	MligTC455_17086	636	13.26	Mlig455_010704	Neo: Int S/G2/M Age: logFC(26M/2M)=0.247 Region-enriched R5: 1.126/0.00025	NOMO2	0.953	-	-	0.953	-	-	-	Mlig455_010704 {REF} {Length: 5598} {Pfam: Carboxypeptidase regulatory-like domain [PF13620.8, score=132.7]; Prealbumin-like fold domain [PF17802.3, score=53.8]; SdrD B-like domain [PF17210.5, score=52.5]; Protein of unknown function (DUF2012) [PF09430.12, score=50.6]; CarboxypepD_reg-like domain [PF13715.8, score=34.6]; Domain of unknown function (DUF4198) [PF10670.11, score=25.1]; Protein of unknown function (DUF1416) [PF07210.14, score=23.1]; Polysaccharide lyase family 4, domain II [PF14686.8, score=18.7]} {Human: ENSG00000185164, NOMO2, NODAL modulator 2, [RH, Score=202, Expect=1e-52]; ENSG00000103226, NOMO3, NODAL modulator 3, [RH, Score=201, Expect=3e-52]; ENSG00000274779, NOMO1, NODAL modulator 1, [RH, Score=201, Expect=4e-52]; ENSG00000103512, NOMO1, NODAL modulator 1, [RH, Score=201, Expect=4e-52]; ENSG00000278087, NOMO3, NODAL modulator 3, [RH, Score=201, Expect=3e-52]} {Mouse: ENSMUSG00000030835, Nomo1, nodal modulator 1, [RH, Score=193, Expect=1e-49]} {Dmel: FBgn0033482, CG1371, [RH, Score=270, Expect=4e-75]} {Celegans: WBGene00015344, nra-4, Nicotinic Receptor Associated, [RH, Score=225, Expect=2e-60]} {Smed: dd_Smed_v6_3315_0_1, dd_Smed_v6_3315_0_1, [RH, Score=275, Expect=8e-77]} {RNA1509_3897} {RNA1310_2809.1} {RNA815_14760}