TomoSeq data search

Data search

Results for MligTC455_25079

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_25079	354	7.38	Mlig455_000947	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.171	ODC1	Mlig455_000947 {REF} {Length: 5167} {Pfam: Pyridoxal-dependent decarboxylase, pyridoxal binding domain [PF02784.18, score=43.7]; Alanine racemase, N-terminal domain [PF01168.22, score=23.6]} {Human: ENSG00000115758, ODC1, ornithine decarboxylase 1, [Score=65.5, Expect=5e-11]} {Mouse: ENSMUSG00000011179, Odc1, ornithine decarboxylase, structural 1, [Score=68.9, Expect=3e-12]} {Celegans: WBGene00003844, odc-1, Ornithine decarboxylase, [RH, Score=86.3, Expect=3e-18]} {Smed: dd_Smed_v6_5493_0_1, dd_Smed_v6_5493_0_1, [RH, Score=65.1, Expect=2e-11]} {RNA1509_1059, RNA1509_17595, RNA1509_17873, RNA1509_22466, RNA1509_55695} {RNA1310_4119.1, RNA1509_1059, RNA1509_17595, RNA1509_17873, RNA1509_22466, RNA1509_55695} {RNA1509_1059, RNA1509_17595, RNA1509_17873, RNA1509_22466, RNA1509_55695, RNA815_1438.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25079

354

7.38

Mlig455_000947

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.171

ODC1

Mlig455_000947 {REF} {Length: 5167} {Pfam: Pyridoxal-dependent decarboxylase, pyridoxal binding domain [PF02784.18, score=43.7]; Alanine racemase, N-terminal domain [PF01168.22, score=23.6]} {Human: ENSG00000115758, ODC1, ornithine decarboxylase 1, [Score=65.5, Expect=5e-11]} {Mouse: ENSMUSG00000011179, Odc1, ornithine decarboxylase, structural 1, [Score=68.9, Expect=3e-12]} {Celegans: WBGene00003844, odc-1, Ornithine decarboxylase, [RH, Score=86.3, Expect=3e-18]} {Smed: dd_Smed_v6_5493_0_1, dd_Smed_v6_5493_0_1, [RH, Score=65.1, Expect=2e-11]} {RNA1509_1059, RNA1509_17595, RNA1509_17873, RNA1509_22466, RNA1509_55695} {RNA1310_4119.1, RNA1509_1059, RNA1509_17595, RNA1509_17873, RNA1509_22466, RNA1509_55695} {RNA1509_1059, RNA1509_17595, RNA1509_17873, RNA1509_22466, RNA1509_55695, RNA815_1438.1}

Cumulative graph for MligTC455_25079

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.252	3.347	0.23507	0.87907
RegionR2	0.74	3.347	0.41399	0.80720
RegionR3	-0.014	3.347	0.85408	1.00000
RegionR4	1.074	3.347	0.20896	0.49293
RegionR5	0.443	3.347	0.60312	0.96055
RegionR6	0.316	3.347	0.69671	1.00000
RegionR7	1.641	3.347	0.03964	0.38050
RegionR8	1.05	3.347	0.34426	0.97758

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.849	3.347	0.99992	1.00000
RegenerationR2	0.131	3.347	0.73831	0.96916
RegenerationR3	0.718	3.347	0.14503	0.57222
RegenerationR4	0.288	3.347	0.55790	0.89589
RegenerationR5	0.376	3.347	0.38604	0.78952
RegenerationR6	-0.021	3.347	0.96792	1.00000
RegenerationBL	0.07	3.347	0.90414	1.00000
RegenerationTP	0.076	3.347	0.90407	1.00000

Genes with expression patterns similar to MligTC455_25079

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25079	354	7.38	Mlig455_000947	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.171	ODC1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_000947 {REF} {Length: 5167} {Pfam: Pyridoxal-dependent decarboxylase, pyridoxal binding domain [PF02784.18, score=43.7]; Alanine racemase, N-terminal domain [PF01168.22, score=23.6]} {Human: ENSG00000115758, ODC1, ornithine decarboxylase 1, [Score=65.5, Expect=5e-11]} {Mouse: ENSMUSG00000011179, Odc1, ornithine decarboxylase, structural 1, [Score=68.9, Expect=3e-12]} {Celegans: WBGene00003844, odc-1, Ornithine decarboxylase, [RH, Score=86.3, Expect=3e-18]} {Smed: dd_Smed_v6_5493_0_1, dd_Smed_v6_5493_0_1, [RH, Score=65.1, Expect=2e-11]} {RNA1509_1059, RNA1509_17595, RNA1509_17873, RNA1509_22466, RNA1509_55695} {RNA1310_4119.1, RNA1509_1059, RNA1509_17595, RNA1509_17873, RNA1509_22466, RNA1509_55695} {RNA1509_1059, RNA1509_17595, RNA1509_17873, RNA1509_22466, RNA1509_55695, RNA815_1438.1}
2.	MligTC455_48828	797	16.6	Mlig455_012631	Neo: - Age: Down-Down-Down	DHTKD1	1.664	0.713	-	-	-	0.951	-	Mlig455_012631 {REF} {Length: 4577} {TRANSSPLICED} {Pfam: Transketolase, pyrimidine binding domain [PF02779.26, score=199.5]; 2-oxoglutarate dehydrogenase C-terminal [PF16870.7, score=165.1]; Dehydrogenase E1 component [PF00676.22, score=134.5]} {Human: ENSG00000181192, DHTKD1, dehydrogenase E1 and transketolase domain containing 1, [RH, Score=810, Expect=0.0]} {Mouse: ENSMUSG00000025815, Dhtkd1, dehydrogenase E1 and transketolase domain containing 1, [RH, Score=796, Expect=0.0]} {Dmel: FBgn0039827, CG1544, [RH, Score=801, Expect=0.0]} {Celegans: WBGene00014098, ogdh-2, Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial, [RH, Score=826, Expect=0.0]} {Smed: dd_Smed_v6_7384_0_1, dd_Smed_v6_7384_0_1, [RH, Score=820, Expect=0.0]} {RNA1509_22040} {RNA1310_1958.1} {RNA815_5147}
3.	MligTC455_17471	120	2.49	Mlig455_063075	Neo: Int S/G2/M Age: -	CDT1	0.967	-	-	-	-	0.967	-	Mlig455_063075 {REF} {Length: 2566} {TRANSSPLICED} {Pfam: DNA replication factor CDT1 like [PF08839.13, score=88.2]; DNA replication factor Cdt1 C-terminal domain [PF16679.7, score=51.8]} {Human: ENSG00000167513, CDT1, chromatin licensing and DNA replication factor 1, [RH, Score=118, Expect=2e-27]} {Dmel: FBgn0000996, dup, double parked, [RH, Score=79.0, Expect=6e-15]} {RNA1509_15628} {RNA1310_4469.1} {RNA815_17273}
4.	MligTC455_19451	122	2.54	Mlig455_041592	Neo: - Age: - Regeneration-upregulated R2: 5.256 Regeneration-enriched R2: 5.256		0.956	-	-	-	-	0.956	-	Mlig455_041592 {REF} {Length: 1456} {NoTransDecoderORF} {RNA1509_46649} {RNA1310_50665} {RNA815_51140}