M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_25083

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25083 218 4.55 Mlig455_011190, Mlig455_011219, Mlig455_024753

Neo: -

Age: -

 KCNMA1

Mlig455_011190 {REF} {Length: 4871} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=107.7]; Ion transport protein [PF00520.33, score=63.4]; Ion channel [PF07885.18, score=52.6]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=972, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=968, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [Score=1024, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=991, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=978, Expect=0.0]} {RNA1509_27885} {RNA1310_2876} {RNA815_4208}

Mlig455_011219 {REF} {Length: 5093} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=110.9]; Ion transport protein [PF00520.33, score=62.1]; Ion channel [PF07885.18, score=52.4]; TrkA-N domain [PF02254.20, score=20.0]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1130, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1129, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1200, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1149, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=1150, Expect=0.0]} {RNA1509_27885} {RNA1310_2276, RNA1509_27885} {RNA1509_27885, RNA815_9989}

Mlig455_024753 {REF} {Length: 4853} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=112.5]; TrkA-N domain [PF02254.20, score=21.0]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=805, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=803, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [Score=466, Expect=2e-149]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=792, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=849, Expect=0.0]} {RNA1509_27885} {RNA1310_2276} {RNA815_4208}

Cumulative graph for MligTC455_25083

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.805 2.861 0.21734 0.85938
RegionR2 2.732 2.861 0.02347 0.17013
RegionR3 1.962 2.861 0.03241 0.31115
RegionR4 -0.882 2.861 0.98234 1.00000
RegionR5 -0.066 2.861 0.87738 1.00000
RegionR6 0.732 2.861 0.50621 1.00000
RegionR7 0.282 2.861 0.77492 1.00000
RegionR8 1.045 2.861 0.48687 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.124 2.861 0.99990 1.00000
RegenerationR2 -1.377 2.861 0.10030 0.50121
RegenerationR3 0.58 2.861 0.52572 0.86967
RegenerationR4 1.449 2.861 0.13963 0.56143
RegenerationR5 1.019 2.861 0.24176 0.67548
RegenerationR6 0.599 2.861 0.53309 0.82877
RegenerationBL -4.989 2.861 0.04837 0.25236
RegenerationTP 3.033 2.861 0.00414 0.10705


Genes with expression patterns similar to MligTC455_25083

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25083 218 4.55 Mlig455_011190, Mlig455_011219, Mlig455_024753

Neo: -

Age: -

 KCNMA1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_011190 {REF} {Length: 4871} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=107.7]; Ion transport protein [PF00520.33, score=63.4]; Ion channel [PF07885.18, score=52.6]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=972, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=968, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [Score=1024, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=991, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=978, Expect=0.0]} {RNA1509_27885} {RNA1310_2876} {RNA815_4208}

Mlig455_011219 {REF} {Length: 5093} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=110.9]; Ion transport protein [PF00520.33, score=62.1]; Ion channel [PF07885.18, score=52.4]; TrkA-N domain [PF02254.20, score=20.0]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1130, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1129, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1200, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1149, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=1150, Expect=0.0]} {RNA1509_27885} {RNA1310_2276, RNA1509_27885} {RNA1509_27885, RNA815_9989}

Mlig455_024753 {REF} {Length: 4853} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=112.5]; TrkA-N domain [PF02254.20, score=21.0]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=805, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=803, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [Score=466, Expect=2e-149]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=792, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=849, Expect=0.0]} {RNA1509_27885} {RNA1310_2276} {RNA815_4208}
2. MligTC455_40184 660 13.74 Mlig455_004167, Mlig455_004192

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.655

 1.819 - - - - 0.958 0.861

Mlig455_004167 {REF} {Length: 1157} {RNA1509_29172, RNA1509_51059} {RNA1310_10204, RNA1509_29172, RNA1509_51059} {RNA1509_29172, RNA1509_51059, RNA815_19579}

Mlig455_004192 {REF} {Length: 887} {RNA1509_51059, RNA1509_60087} {RNA1310_10204, RNA1509_60087} {RNA1509_60087, RNA815_19579}
3. MligTC455_11410 24 0.5 Mlig455_070874

Neo: -

Age: -

 1.689 - - - 0.724 0.965 - Mlig455_070874 {REF} {Length: 2487} {RNA1310_71185}
4. MligTC455_22067 76 1.59 Mlig455_001752, Mlig455_001775

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R5: 4.257/0.00021

 NANOS1 1.666 - - - - 0.961 0.705

Mlig455_001752 {REF} {Length: 2806} {Pfam: Nanos RNA binding domain [PF05741.15, score=79.7]} {Human: ENSG00000188613, NANOS1, nanos C2HC-type zinc finger 1, [RH, Score=82.4, Expect=2e-17]; ENSG00000188425, NANOS2, nanos C2HC-type zinc finger 2, [RH, Score=81.6, Expect=2e-18]} {Mouse: ENSMUSG00000072437, Nanos1, nanos C2HC-type zinc finger 1, [RH, Score=83.2, Expect=5e-18]; ENSMUSG00000051965, Nanos2, nanos C2HC-type zinc finger 2, [RH, Score=79.3, Expect=1e-17]} {Dmel: FBgn0002962, nos, Nitric oxide synthase, [Score=74.7, Expect=9e-15]} {Smed: dd_Smed_v6_10484_0_1, dd_Smed_v6_10484_0_1, [RH, Score=114, Expect=6e-30]} {RNA1310_14325} {RNA815_45506}

Mlig455_001775 {REF} {Length: 2572} {Pfam: Nanos RNA binding domain [PF05741.15, score=79.5]} {Human: ENSG00000188613, NANOS1, nanos C2HC-type zinc finger 1, [RH, Score=82.4, Expect=3e-17]; ENSG00000188425, NANOS2, nanos C2HC-type zinc finger 2, [RH, Score=81.6, Expect=3e-18]} {Mouse: ENSMUSG00000072437, Nanos1, nanos C2HC-type zinc finger 1, [RH, Score=83.2, Expect=1e-17]; ENSMUSG00000051965, Nanos2, nanos C2HC-type zinc finger 2, [RH, Score=79.7, Expect=1e-17]} {Dmel: FBgn0002962, nos, Nitric oxide synthase, [Score=73.9, Expect=3e-14]} {Smed: dd_Smed_v6_10484_0_1, dd_Smed_v6_10484_0_1, [RH, Score=113, Expect=3e-29]} {RNA1310_14325} {RNA815_51586}
5. MligTC455_13810 309 6.44 Mlig455_024887

Neo: -

Age: Down-Down-Up

Region-enriched R7: 3.860/0.00000

Regeneration-downregulated BL: -7.793

Regeneration-depleted BL: -7.793

 0.981 - - - - 0.981 - Mlig455_024887 {REF} {Length: 2641} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=33.8]; Prokaryotic RING finger family 4 [PF14447.8, score=30.7]} {RNA1310_44589} {RNA815_56600}
6. MligTC455_31141 351 7.31 Mlig455_041599, Mlig455_041622

Neo: -

Age: -

 STK38L 0.981 - - - - 0.981 -

Mlig455_041599 {REF} {Length: 3957} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=210.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=98.5]; ABC1 atypical kinase-like domain [PF03109.18, score=29.7]; Protein kinase C terminal domain [PF00433.26, score=28.8]; Kinase-like [PF14531.8, score=19.4]} {Human: ENSG00000211455, STK38L, serine/threonine kinase 38 like, [RH, Score=645, Expect=0.0]; ENSG00000112079, STK38, serine/threonine kinase 38, [RH, Score=642, Expect=0.0]} {Mouse: ENSMUSG00000001630, Stk38l, serine/threonine kinase 38 like, [RH, Score=646, Expect=0.0]; ENSMUSG00000024006, Stk38, serine/threonine kinase 38, [RH, Score=637, Expect=0.0]} {Dmel: FBgn0003744, trc, tricornered, [RH, Score=632, Expect=0.0]} {Celegans: WBGene00004727, sax-1, Serine/threonine-protein kinase sax-1, [RH, Score=573, Expect=0.0]} {Smed: dd_Smed_v6_6462_0_1, dd_Smed_v6_6462_0_1, [RH, Score=654, Expect=0.0]} {RNA1509_13967, RNA1509_26954} {RNA1310_13898.1, RNA1509_13967, RNA1509_26954} {RNA1509_13967, RNA1509_26954, RNA815_5091}

Mlig455_041622 {REF} {Length: 3421} {Pfam: Protein kinase domain [PF00069.27, score=67.5]; Protein kinase C terminal domain [PF00433.26, score=29.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=28.2]} {Human: ENSG00000211455, STK38L, serine/threonine kinase 38 like, [Score=285, Expect=2e-92]; ENSG00000112079, STK38, serine/threonine kinase 38, [Score=280, Expect=2e-90]} {Mouse: ENSMUSG00000001630, Stk38l, serine/threonine kinase 38 like, [Score=283, Expect=7e-92]; ENSMUSG00000024006, Stk38, serine/threonine kinase 38, [Score=275, Expect=1e-88]} {Dmel: FBgn0003744, trc, tricornered, [Score=273, Expect=3e-88]} {Celegans: WBGene00004727, sax-1, Serine/threonine-protein kinase sax-1, [Score=238, Expect=1e-74]} {Smed: dd_Smed_v6_6462_0_7, dd_Smed_v6_6462_0_7, [Score=282, Expect=8e-92]} {RNA1509_26954} {RNA1310_13898.1} {RNA815_5091}
7. MligTC455_18422 130 2.7 Mlig455_067743

Neo: -

Age: -

 GGPS1 0.978 - - - - - 0.978 Mlig455_067743 {REF} {Length: 1564} {TRANSSPLICED} {Pfam: Polyprenyl synthetase [PF00348.19, score=214.9]} {Human: ENSG00000152904, GGPS1, geranylgeranyl diphosphate synthase 1, [RH, Score=312, Expect=5e-106]} {Mouse: ENSMUSG00000021302, Ggps1, geranylgeranyl diphosphate synthase 1, [RH, Score=316, Expect=9e-108]} {Dmel: FBgn0019662, qm, quemao, [RH, Score=276, Expect=1e-91]} {Celegans: WBGene00000761, coq-1, COenzyme Q (Ubiquinone) biosynthesis, [Score=61.6, Expect=1e-10]} {Smed: dd_Smed_v6_7235_0_2, dd_Smed_v6_7235_0_2, [RH, Score=300, Expect=2e-101]} {RNA1509_28048} {RNA1310_30605, RNA1509_28048} {RNA1509_28048, RNA815_14345}
8. MligTC455_30981 34 0.71 Mlig455_004754

Neo: -

Age: -

 0.976 - - - - 0.976 - Mlig455_004754 {REF} {Length: 2643} {RNA1509_31206} {RNA1310_19115} {RNA815_41683}
9. MligTC455_01786 22 0.45 Mlig455_013697

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_013697 {REF} {Length: 272} {NoTransDecoderORF} {RNA1310_82790}
10. MligTC455_07523 37 0.76 Mlig455_009295

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_009295 {REF} {Length: 527} {NoTransDecoderORF} {RNA1509_54671} {RNA1310_20601} {RNA815_6311.1}
11. MligTC455_42250 108 2.24 Mlig455_066618

Neo: -

Age: -

 0.969 - - - 0.969 - - Mlig455_066618 {REF} {Length: 1449} {RNA1310_15653} {RNA815_34669}
12. MligTC455_34878 104 2.16 Mlig455_036542, Mlig455_036543, Mlig455_069108

Neo: -

Age: logFC(26M/2M)=0.405

Region-enriched R2: 3.631/0.02283

 PCDH1, PCDH7 0.966 - - - - 0.966 -

Mlig455_036542 {REF} {Length: 1895} {RNA1509_39966} {RNA1310_5376.1} {RNA815_39691}

Mlig455_036543 {REF} {Length: 2542} {Pfam: Cadherin domain [PF00028.19, score=250.2]; Cadherin-like [PF16184.7, score=22.1]} {Human: ENSG00000169851, PCDH7, protocadherin 7, [Score=211, Expect=8e-58]; ENSG00000156453, PCDH1, protocadherin 1, [Score=206, Expect=3e-56]} {Mouse: ENSMUSG00000029108, Pcdh7, protocadherin 7, [Score=214, Expect=6e-59]} {Dmel: FBgn0284247, ds, dachsous, [Score=185, Expect=4e-49]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=140, Expect=2e-34]} {Smed: dd_Smed_v6_18373_0_1, dd_Smed_v6_18373_0_1, [Score=216, Expect=6e-60]} {RNA1509_39966} {RNA1310_5376.1} {RNA815_27416}

Mlig455_069108 {REF} {Length: 4649} {Pfam: Cadherin domain [PF00028.19, score=319.0]; Cadherin-like [PF08266.14, score=39.2]; Cadherin-like [PF16184.7, score=32.1]} {Human: ENSG00000156453, PCDH1, protocadherin 1, [Score=314, Expect=2e-89]} {Mouse: ENSMUSG00000029108, Pcdh7, protocadherin 7, [RH, Score=302, Expect=4e-86]} {Dmel: FBgn0284247, ds, dachsous, [Score=246, Expect=4e-66]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=228, Expect=1e-60]} {Smed: dd_Smed_v6_18373_0_1, dd_Smed_v6_18373_0_1, [Score=325, Expect=9e-94]} {RNA1509_39966} {RNA1310_5376.1, RNA1509_39966} {RNA1509_39966, RNA815_27416}
13. MligTC455_36275 17 0.36 Mlig455_008212

Neo: -

Age: Up-Down-Down

 0.965 - - - - 0.965 - Mlig455_008212 {REF} {Length: 4302} {Pfam: Mab-21 protein [PF03281.16, score=47.1]} {RNA1509_19198} {RNA1310_46396} {RNA815_31743}
14. MligTC455_11844 12 0.25 Mlig455_035140

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_035140 {REF} {Length: 439} {NoTransDecoderORF} {RNA1310_130188}
15. MligTC455_21065 377 7.86 Mlig455_026989, Mlig455_056372

Neo: -

Age: -

Region-enriched R2: 3.270/0.00071

 RABEPK 0.964 - - - - 0.964 -

Mlig455_026989 {REF} {Length: 2435} {TRANSSPLICED} {Pfam: Galactose oxidase, central domain [PF13418.8, score=102.0]; Galactose oxidase, central domain [PF13415.8, score=90.2]; Kelch motif [PF13854.8, score=79.6]; Kelch motif [PF13964.8, score=77.3]; Kelch motif [PF01344.27, score=54.6]; Kelch motif [PF07646.17, score=52.7]} {Human: ENSG00000136933, RABEPK, Rab9 effector protein with kelch motifs, [RH, Score=201, Expect=3e-60]} {Mouse: ENSMUSG00000070953, Rabepk, Rab9 effector protein with kelch motifs, [RH, Score=193, Expect=2e-57]} {Dmel: FBgn0040344, CG3711, [Score=68.9, Expect=3e-12]} {Smed: dd_Smed_v6_6387_0_1, dd_Smed_v6_6387_0_1, [Score=57.8, Expect=5e-09]} {RNA1509_13410} {RNA1310_16584} {RNA815_18867}

Mlig455_056372 {REF} {Length: 2438} {TRANSSPLICED} {Pfam: Galactose oxidase, central domain [PF13418.8, score=102.0]; Galactose oxidase, central domain [PF13415.8, score=90.2]; Kelch motif [PF13854.8, score=79.6]; Kelch motif [PF13964.8, score=77.3]; Kelch motif [PF01344.27, score=54.6]; Kelch motif [PF07646.17, score=52.7]} {Human: ENSG00000136933, RABEPK, Rab9 effector protein with kelch motifs, [RH, Score=201, Expect=3e-60]} {Mouse: ENSMUSG00000070953, Rabepk, Rab9 effector protein with kelch motifs, [RH, Score=193, Expect=2e-57]} {Dmel: FBgn0040344, CG3711, [Score=68.9, Expect=3e-12]} {Smed: dd_Smed_v6_6387_0_1, dd_Smed_v6_6387_0_1, [Score=57.8, Expect=5e-09]} {RNA1509_13410} {RNA1310_16584} {RNA815_18867}
16. MligTC455_36704 63 1.32 Mlig455_020575

Neo: -

Age: -

Region-enriched R2: 5.118/0.04973

 0.963 - - - - 0.963 - Mlig455_020575 {REF} {Length: 4566} {NoTransDecoderORF} {RNA1509_44743} {RNA1310_5450.1} {RNA815_16253.1}
17. MligTC455_13522 37 0.76 Mlig455_053843

Neo: -

Age: -

 SBK1 0.962 - - - 0.962 - - Mlig455_053843 {REF} {Length: 1643} {Pfam: Protein kinase domain [PF00069.27, score=136.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=105.2]; Kinase-like [PF14531.8, score=20.3]} {Human: ENSG00000188322, SBK1, SH3 domain binding kinase 1, [Score=247, Expect=8e-78]} {Mouse: ENSMUSG00000042978, Sbk1, SH3-binding kinase 1, [Score=247, Expect=5e-78]} {Dmel: FBgn0034137, CG4945, [RH, Score=204, Expect=2e-60]} {Celegans: WBGene00012792, Y43D4A.6, [Score=112, Expect=8e-28]} {Smed: dd_Smed_v6_5328_1_1, dd_Smed_v6_5328_1_1, [Score=101, Expect=1e-23]} {RNA1310_55113}
18. Mlig999033.1 0.96 - - - - 0.960 -
19. MligTC455_41855 700 14.59 Mlig455_007846

Neo: -

Age: Down-Up-Down

 0.96 - - - - 0.960 - Mlig455_007846 {REF} {Length: 2805} {Pfam: Profilin [PF00235.21, score=46.7]} {RNA1509_36755} {RNA1310_26877} {RNA815_12700.1}
20. MligTC455_19425 48 1 Mlig455_036286

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_036286 {REF} {Length: 2321} {NoTransDecoderORF} {RNA1509_60145} {RNA1310_87383} {RNA815_53511}
21. MligTC455_38984 42 0.88 Mlig455_049162

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_049162 {REF} {Length: 684} {NoTransDecoderORF} {RNA1509_5313} {RNA1310_1658.1} {RNA815_28415}
22. MligTC455_39782 128 2.66 Mlig455_010278

Neo: -

Age: -

Region-enriched R7: 6.391/0.00442

 NOTCH3 0.958 - - - - 0.958 - Mlig455_010278 {REF} {Length: 3985} {Pfam: EGF-like domain [PF00008.29, score=132.7]; Calcium-binding EGF domain [PF07645.17, score=118.5]; Delta serrate ligand [PF01414.21, score=71.5]; Human growth factor-like EGF [PF12661.9, score=69.6]; EGF domain [PF12947.9, score=27.7]; Complement Clr-like EGF-like [PF12662.9, score=25.5]; EGF-like domain [PF07974.15, score=19.2]} {Human: ENSG00000074181, NOTCH3, notch 3, [Score=157, Expect=4e-38]; ENSG00000101384, JAG1, jagged 1, [Score=152, Expect=8e-37]} {Mouse: ENSMUSG00000027878, Notch2, notch 2, [Score=150, Expect=5e-36]; ENSMUSG00000027276, Jag1, jagged 1, [Score=149, Expect=8e-36]} {Dmel: FBgn0004647, N, Notch, [Score=140, Expect=3e-33]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=139, Expect=8e-33]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=134, Expect=2e-31]} {RNA1310_15133} {RNA815_29197}
23. MligTC455_42086 119 2.49 Mlig455_058136

Neo: -

Age: -

 KIRREL1 0.958 - - 0.958 - - - Mlig455_058136 {REF} {Length: 3771} {Pfam: Immunoglobulin domain [PF13927.8, score=111.3]; Immunoglobulin I-set domain [PF07679.18, score=85.2]; Immunoglobulin domain [PF13895.8, score=71.5]; Immunoglobulin domain [PF00047.27, score=67.3]; Immunoglobulin V-set domain [PF07686.19, score=39.2]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=25.9]} {Human: ENSG00000183853, KIRREL1, kirre like nephrin family adhesion molecule 1, [RH, Score=120, Expect=4e-27]; ENSG00000149571, KIRREL3, kirre like nephrin family adhesion molecule 3, [RH, Score=116, Expect=6e-26]} {Mouse: ENSMUSG00000041734, Kirrel, kirre like nephrin family adhesion molecule 1, [RH, Score=119, Expect=6e-27]; ENSMUSG00000032036, Kirrel3, kirre like nephrin family adhesion molecule 3, [RH, Score=118, Expect=1e-26]} {Dmel: FBgn0085420, DIP-delta, Dpr-interacting protein delta, [Score=60.1, Expect=7e-09]} {Celegans: WBGene00006365, syg-1, Synaptogenesis protein syg-1, [RH, Score=98.6, Expect=8e-21]} {Smed: dd_Smed_v6_12118_0_1, dd_Smed_v6_12118_0_1, [RH, Score=227, Expect=6e-62]} {RNA1509_42885} {RNA1310_3333} {RNA815_3466}
24. MligTC455_50956 889 18.51 Mlig455_045039

Neo: -

Age: Down-Down-Up

 0.958 - - - - 0.958 - Mlig455_045039 {REF} {Length: 1189} {RNA1509_10819, RNA1509_13685, RNA1509_55859} {RNA1310_30137, RNA1509_10819, RNA1509_13685, RNA1509_55859} {RNA1509_10819, RNA1509_13685, RNA1509_55859, RNA815_14527}
25. MligTC455_22205 86 1.79 Mlig455_014870

Neo: -

Age: Down-Down-Up

 0.957 - - - - - 0.957 Mlig455_014870 {REF} {Length: 4854} {TRANSSPLICED} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=173.6]} {Dmel: FBgn0022981, rpk, ripped pocket, [Score=49.7, Expect=8e-06]} {Smed: dd_Smed_v6_13943_0_1, dd_Smed_v6_13943_0_1, [Score=90.1, Expect=1e-18]} {RNA1509_26567} {RNA1310_8375.1, RNA1509_26567} {RNA1509_26567, RNA815_6618}
26. MligTC455_17477 47 0.98 Mlig455_053346

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_053346 {REF} {Length: 2041} {RNA1509_20382} {RNA1310_59327} {RNA815_58492}
27. MligTC455_19143 186 3.86 Mlig455_040116

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_040116 {REF} {Length: 6995} {Smed: dd_Smed_v6_11519_0_1, dd_Smed_v6_11519_0_1, [RH, Score=600, Expect=0.0]} {RNA1509_43828, RNA1509_5002} {RNA1310_824.1, RNA1509_43828} {RNA1509_43828, RNA815_15829}
28. MligTC455_21036 7843 163.39 Mlig455_057458

Neo: Int S/G2/M

Age: -

 0.956 - - - - 0.956 - Mlig455_057458 {REF} {Length: 320} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_712} {RNA1310_95473} {RNA815_49240}
29. MligTC455_50583 204 4.26 Mlig455_061341

Neo: -

Age: -

Region-enriched R2: 2.735/0.04280

 TMEM199 0.956 - - - - 0.956 - Mlig455_061341 {REF} {Length: 1426} {TRANSSPLICED} {Pfam: Endoplasmic reticulum-based factor for assembly of V-ATPase [PF11712.10, score=89.2]} {Human: ENSG00000244045, TMEM199, transmembrane protein 199, [RH, Score=73.2, Expect=3e-15]} {Mouse: ENSMUSG00000051232, Tmem199, transmembrane protein 199, [RH, Score=75.1, Expect=3e-16]} {Dmel: FBgn0260467, CG7071, [RH, Score=81.3, Expect=6e-18]} {Celegans: WBGene00017289, F09E5.11, [RH, Score=72.0, Expect=3e-15]} {RNA1509_38110} {RNA1310_36171, RNA1509_38110} {RNA1509_38110, RNA815_21171}
30. MligTC455_26124 57 1.18 Mlig455_009301

Neo: -

Age: Up-Down-Down

 0.955 - - - 0.955 - - Mlig455_009301 {REF} {Length: 3078} {RNA1509_41127} {RNA1310_16094.1} {RNA815_15247.1}
31. MligTC455_02323 125 2.59 Mlig455_042840

Neo: -

Age: -

Region-enriched R7: 3.998/0.00319

 HRASLS 0.954 - - - - 0.954 - Mlig455_042840 {REF} {Length: 1042} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=47.1]} {Human: ENSG00000127252, HRASLS, HRAS like suppressor, [Score=47.8, Expect=7e-06]} {Mouse: ENSMUSG00000028003, Lrat, lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase), [RH, Score=47.8, Expect=4e-06]} {RNA1310_85008} {RNA815_46214}
32. MligTC455_25312 82 1.7 Mlig455_047804

Neo: -

Age: Up-Down-Up

 RPH3A 0.954 - - - 0.954 - - Mlig455_047804 {REF} {Length: 6825} {Pfam: FYVE-type zinc finger [PF02318.18, score=65.6]; Piccolo Zn-finger [PF05715.15, score=28.6]} {Human: ENSG00000089169, RPH3A, rabphilin 3A, [Score=67.4, Expect=2e-10]; ENSG00000176406, RIMS2, regulating synaptic membrane exocytosis 2, [Score=66.2, Expect=6e-10]} {Mouse: ENSMUSG00000029608, Rph3a, rabphilin 3A, [Score=64.7, Expect=1e-09]; ENSMUSG00000037386, Rims2, regulating synaptic membrane exocytosis 2, [Score=63.9, Expect=2e-09]} {Dmel: FBgn0053547, Rim, Rab3 interacting molecule, [Score=75.9, Expect=4e-13]} {Celegans: WBGene00006750, unc-10, Rab-3-interacting molecule unc-10, [Score=62.8, Expect=3e-09]} {Smed: dd_Smed_v6_21937_0_1, dd_Smed_v6_21937_0_1, [RH, Score=165, Expect=8e-42]} {RNA1509_17082} {RNA1310_10224} {RNA815_4128}
33. MligTC455_31323 119 2.48 Mlig455_064684

Neo: -

Age: -

 ACP2 0.954 - - - - 0.954 - Mlig455_064684 {REF} {Length: 3113} {TRANSSPLICED} {Pfam: Histidine phosphatase superfamily (branch 2) [PF00328.24, score=78.1]} {Human: ENSG00000134575, ACP2, acid phosphatase 2, lysosomal, [Score=179, Expect=4e-51]} {Mouse: ENSMUSG00000002103, Acp2, acid phosphatase 2, lysosomal, [Score=185, Expect=3e-53]} {Dmel: FBgn0000032, Acph-1, Acid phosphatase 1, [Score=173, Expect=6e-49]} {Celegans: WBGene00015161, pho-5, Putative acid phosphatase 5, [RH, Score=169, Expect=9e-48]} {Smed: dd_Smed_v6_11594_0_1, dd_Smed_v6_11594_0_1, [RH, Score=179, Expect=6e-51]} {RNA1509_29407} {RNA1310_15922, RNA1509_29407} {RNA1509_29407, RNA815_8033}
34. MligTC455_47323 345 7.19 Mlig455_048949

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_048949 {REF} {Length: 797} {RNA1509_56237} {RNA1310_17381} {RNA815_10247}
35. MligTC455_07970 56 1.17 Mlig455_033539

Neo: -

Age: -

 ZNF142 0.952 - - - 0.952 - - Mlig455_033539 {REF} {Length: 3927} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=51.2]; Zinc finger, C2H2 type [PF00096.28, score=45.1]; Zinc-finger double domain [PF13465.8, score=44.1]; C2H2-type zinc finger [PF13894.8, score=19.6]} {Human: ENSG00000115568, ZNF142, zinc finger protein 142, [Score=107, Expect=2e-23]} {Mouse: ENSMUSG00000026135, Zfp142, zinc finger protein 142, [Score=80.9, Expect=3e-15]; ENSMUSG00000029249, Rest, RE1-silencing transcription factor, [Score=79.3, Expect=8e-15]} {Dmel: FBgn0001180, hb, hunchback, [RH, Score=189, Expect=4e-51]} {Celegans: WBGene00001824, hbl-1, Hunchback-like protein, [RH, Score=174, Expect=2e-45]} {Smed: dd_Smed_v6_47627_0_1, dd_Smed_v6_47627_0_1, [Score=296, Expect=9e-94]} {RNA1310_53058} {RNA815_35691}
36. MligTC455_18004 298 6.21 Mlig455_032863

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.522

Region-enriched R6: 4.358/0.00000

 PCYT1B 0.952 - - - - 0.952 - Mlig455_032863 {REF} {Length: 1402} {Pfam: Cytidylyltransferase-like [PF01467.28, score=75.4]} {Human: ENSG00000102230, PCYT1B, phosphate cytidylyltransferase 1, choline, beta, [Score=145, Expect=7e-42]; ENSG00000161217, PCYT1A, phosphate cytidylyltransferase 1, choline, alpha, [Score=141, Expect=8e-41]} {Mouse: ENSMUSG00000035246, Pcyt1b, phosphate cytidylyltransferase 1, choline, beta isoform, [Score=145, Expect=5e-42]; ENSMUSG00000005615, Pcyt1a, phosphate cytidylyltransferase 1, choline, alpha isoform, [Score=139, Expect=2e-39]} {Dmel: FBgn0035231, Pcyt2, Phosphocholine cytidylyltransferase 2, [Score=142, Expect=7e-41]} {Celegans: WBGene00017241, pcyt-1, Putative choline-phosphate cytidylyltransferase, [Score=136, Expect=1e-38]} {Smed: dd_Smed_v6_4008_0_1, dd_Smed_v6_4008_0_1, [Score=150, Expect=1e-44]} {RNA1509_47420} {RNA1310_40040} {RNA815_23807.1}
37. MligTC455_22144 227 4.73 Mlig455_016643, Mlig455_034917, Mlig455_044862, Mlig455_053181, Mlig455_058559, Mlig455_063638

Neo: -

Age: Down-Up-Down

 0.952 - - - - 0.952 -

Mlig455_016643 {REF} {Length: 796} {Pfam: Helix-turn-helix domain [PF13518.8, score=26.7]; Homeodomain-like domain [PF13384.8, score=24.6]; Winged helix-turn helix [PF13551.8, score=22.4]; CENP-B N-terminal DNA-binding domain [PF04218.15, score=19.1]} {RNA1509_22932} {RNA1310_54181} {RNA815_224.1}

Mlig455_034917 {REF} {Length: 751} {RNA1509_22932} {RNA1310_19377.1} {RNA815_224.1}

Mlig455_044862 {REF} {Length: 540} {Pfam: DDE superfamily endonuclease [PF13358.8, score=19.7]} {RNA1310_19377.1} {RNA815_224.1}

Mlig455_053181 {REF} {Length: 769} {NoTransDecoderORF} {RNA1509_57429} {RNA1310_73907} {RNA815_44596}

Mlig455_058559 {REF} {Length: 690} {Pfam: Helix-turn-helix domain [PF13518.8, score=26.5]; Homeodomain-like domain [PF13384.8, score=24.4]; Winged helix-turn helix [PF13551.8, score=22.3]; CENP-B N-terminal DNA-binding domain [PF04218.15, score=19.1]} {RNA1310_54181} {RNA815_224.1}

Mlig455_063638 {REF} {Length: 490} {RNA1310_19377.1} {RNA815_224.1}
38. MligTC455_45646 1265 26.36 Mlig455_057121, Mlig455_069297

Neo: -

Age: -

Region-enriched R4: 1.525/0.00499

 PLEKHF2 0.952 - - - - - 0.952

Mlig455_057121 {REF} {Length: 2756} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=71.7]; PH domain [PF00169.31, score=34.2]; PH domain [PF14593.8, score=21.3]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [RH, Score=221, Expect=8e-72]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [RH, Score=220, Expect=1e-71]} {Dmel: FBgn0025381, rush, rush hour, [RH, Score=209, Expect=1e-66]} {Celegans: WBGene00014019, ZK632.12, [RH, Score=206, Expect=4e-66]} {Smed: dd_Smed_v6_6176_1_1, dd_Smed_v6_6176_1_1, [RH, Score=189, Expect=2e-59]} {RNA1509_20229} {RNA1310_12913.1} {RNA815_8773}

Mlig455_069297 {REF} {Length: 2751} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=71.7]; PH domain [PF00169.31, score=34.2]; PH domain [PF14593.8, score=21.3]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [RH, Score=221, Expect=8e-72]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [RH, Score=220, Expect=1e-71]} {Dmel: FBgn0025381, rush, rush hour, [RH, Score=209, Expect=1e-66]} {Celegans: WBGene00014019, ZK632.12, [RH, Score=206, Expect=4e-66]} {Smed: dd_Smed_v6_6176_1_1, dd_Smed_v6_6176_1_1, [RH, Score=189, Expect=2e-59]} {RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862} {RNA1310_12913.1, RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862} {RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862, RNA815_8773}
39. MligTC455_00967 18 0.37 Mlig455_070923

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_070923 {REF} {Length: 620} {Mouse: ENSMUSG00000073490, Ifi207, interferon activated gene 207, [Score=58.2, Expect=3e-10]} {RNA1509_11295} {RNA1310_687} {RNA815_55072.1}
40. MligTC455_02324 121 2.51 Mlig455_045874

Neo: -

Age: -

Region-enriched R7: 4.211/0.00373

 HRASLS 0.951 - - - - 0.951 - Mlig455_045874 {REF} {Length: 1080} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=47.1]} {Human: ENSG00000127252, HRASLS, HRAS like suppressor, [Score=47.8, Expect=7e-06]} {Mouse: ENSMUSG00000028003, Lrat, lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase), [RH, Score=47.4, Expect=5e-06]} {RNA1310_85008} {RNA815_46214}
41. MligTC455_52339 1135 23.65 Mlig455_056272

Neo: Int S/G2/M

Age: -

Region-enriched R2: 1.777/0.00656

 MRC1 0.951 - - - - 0.951 - Mlig455_056272 {REF} {Length: 7042} {TRANSSPLICED} {Pfam: Lectin C-type domain [PF00059.23, score=224.4]} {Human: ENSG00000260314, MRC1, mannose receptor C-type 1, [Score=79.3, Expect=5e-14]} {Mouse: ENSMUSG00000054580, Pla2r1, phospholipase A2 receptor 1, [Score=70.9, Expect=1e-11]} {Celegans: WBGene00013607, clec-27, C-type LECtin, [Score=62.4, Expect=9e-10]} {Smed: dd_Smed_v6_8262_0_1, dd_Smed_v6_8262_0_1, [Score=84.3, Expect=4e-16]} {RNA1509_16575, RNA1509_33620, RNA1509_40139, RNA1509_854} {RNA1310_1163, RNA1509_16575, RNA1509_33620, RNA1509_40139, RNA1509_854} {RNA1509_16575, RNA1509_33620, RNA1509_40139, RNA1509_854, RNA815_340}
42. MligTC455_26667 92 1.91 Mlig455_014529

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_014529 {REF} {Length: 1721} {RNA1509_15438} {RNA1310_134322} {RNA815_18679}
43. MligTC455_51703 31775 661.97 Mlig455_062573

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.254

Regeneration-upregulated TP: 1.818

Regeneration-enriched TP: 1.818

 UBC 0.95 - - - - 0.950 - Mlig455_062573 {REF} {Length: 3728} {Pfam: Ubiquitin family [PF00240.25, score=654.3]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=319.2]; Ubiquitin-like domain [PF14560.8, score=117.2]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=83.7]; Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=76.6]; Ubiquitin-like domain [PF18037.3, score=68.3]; DUF2407 ubiquitin-like domain [PF10302.11, score=62.3]; FlgD Ig-like domain [PF13860.8, score=38.9]; Toluene-4-monooxygenase system protein B (TmoB) [PF06234.14, score=38.7]; Cilia- and flagella-associated protein 298 [PF11069.10, score=34.5]; Staphylokinase/Streptokinase family [PF02821.18, score=32.8]; Crinkler effector protein N-terminal domain [PF20147.1, score=31.6]; UDP-glucose:Glycoprotein Glucosyltransferase [PF06427.13, score=28.0]; Ubiquitin-like domain [PF18036.3, score=27.6]; GDYXXLXY protein [PF14345.8, score=27.0]; Protein of unknown function (DUF969) [PF06149.14, score=26.1]; Bacterial Ig domain [PF17957.3, score=24.6]; Domain of Unknown Function with PDB structure (DUF3861) [PF12977.9, score=22.9]; ORF11CD3 domain [PF10549.11, score=22.5]; fungal STAND N-terminal Goodbye domain [PF17109.7, score=20.1]; Family of unknown function (DUF5450) [PF17529.4, score=19.2]} {Human: ENSG00000150991, UBC, ubiquitin C, [RH, Score=887, Expect=0.0]} {Mouse: ENSMUSG00000008348, Ubc, ubiquitin C, [RH, Score=890, Expect=0.0]} {Dmel: FBgn0086558, Ubi-p5E, Ubiquitin-5E, [RH, Score=889, Expect=0.0]} {Celegans: WBGene00006727, ubq-1, Polyubiquitin-A Ubiquitin Ubiquitin-related, [RH, Score=874, Expect=0.0]} {Smed: dd_Smed_v6_1697_0_2, dd_Smed_v6_1697_0_2, [RH, Score=164, Expect=8e-50]} {RNA1509_47440} {RNA1310_46150.1} {RNA815_15519.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA