TomoSeq data search

Data search

Results for MligTC455_25094

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_25094	5055	105.32	Mlig455_032232	Neo: Int S/G2/M Age: logFC(26M/2M)=0.425	HNRNPA2B1	Mlig455_032232 {REF} {Length: 1537} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=123.5]; RNA recognition motif [PF16367.7, score=56.0]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=184, Expect=5e-56]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=185, Expect=8e-57]} {Dmel: FBgn0004237, Hrb87F, Heterogeneous nuclear ribonucleoprotein at 87F, [Score=168, Expect=2e-49]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=185, Expect=1e-56]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=191, Expect=7e-60]} {RNA1509_17121, RNA1509_2269, RNA1509_25766, RNA1509_26490, RNA1509_3201, RNA1509_42208, RNA1509_4638} {RNA1310_15816, RNA1509_17121, RNA1509_2269, RNA1509_25766, RNA1509_26490, RNA1509_3201, RNA1509_42208, RNA1509_4638} {RNA1509_17121, RNA1509_2269, RNA1509_25766, RNA1509_26490, RNA1509_3201, RNA1509_42208, RNA1509_4638, RNA815_8363}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_25094

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.437	6.835	0.48952	1.00000
RegionR2	-0.024	6.835	0.94818	1.00000
RegionR3	-0.259	6.835	0.41560	0.94088
RegionR4	0.248	6.835	0.49095	0.81777
RegionR5	0.503	6.835	0.07931	0.26045
RegionR6	0.067	6.835	0.82735	1.00000
RegionR7	0.484	6.835	0.12129	0.65829
RegionR8	-0.581	6.835	0.15432	0.71179

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.911	6.835	0.25074	0.96658
RegenerationR2	0.304	6.835	0.42001	0.82734
RegenerationR3	0.564	6.835	0.15265	0.58232
RegenerationR4	0.248	6.835	0.53878	0.88807
RegenerationR5	-0.22	6.835	0.56426	0.89368
RegenerationR6	0.757	6.835	0.05055	0.28125
RegenerationBL	0.749	6.835	0.03422	0.20765
RegenerationTP	0.008	6.835	0.98366	1.00000

Genes with expression patterns similar to MligTC455_25094

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25094	5055	105.32	Mlig455_032232	Neo: Int S/G2/M Age: logFC(26M/2M)=0.425	HNRNPA2B1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_032232 {REF} {Length: 1537} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=123.5]; RNA recognition motif [PF16367.7, score=56.0]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=184, Expect=5e-56]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=185, Expect=8e-57]} {Dmel: FBgn0004237, Hrb87F, Heterogeneous nuclear ribonucleoprotein at 87F, [Score=168, Expect=2e-49]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=185, Expect=1e-56]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=191, Expect=7e-60]} {RNA1509_17121, RNA1509_2269, RNA1509_25766, RNA1509_26490, RNA1509_3201, RNA1509_42208, RNA1509_4638} {RNA1310_15816, RNA1509_17121, RNA1509_2269, RNA1509_25766, RNA1509_26490, RNA1509_3201, RNA1509_42208, RNA1509_4638} {RNA1509_17121, RNA1509_2269, RNA1509_25766, RNA1509_26490, RNA1509_3201, RNA1509_42208, RNA1509_4638, RNA815_8363}
2.	MligTC455_25095	11032	229.84	Mlig455_032222, Mlig455_032226, Mlig455_038057	Neo: - Age: Down-Down-Up	ANK3, HNRNPA2B1	5.857	0.998	0.998	0.993	0.876	0.996	0.996	Mlig455_032222 {REF} {Length: 1767} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=124.6]; RNA recognition motif [PF16367.7, score=56.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=18.9]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=185, Expect=2e-56]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=186, Expect=4e-57]} {Dmel: FBgn0004237, Hrb87F, Heterogeneous nuclear ribonucleoprotein at 87F, [Score=168, Expect=1e-49]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=186, Expect=5e-57]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=188, Expect=9e-59]} {RNA1509_4638} {RNA1310_15816} {RNA815_8363} Mlig455_032226 {REF} {Length: 1767} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=124.6]; RNA recognition motif [PF16367.7, score=56.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=18.9]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=185, Expect=2e-56]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=186, Expect=4e-57]} {Dmel: FBgn0004237, Hrb87F, Heterogeneous nuclear ribonucleoprotein at 87F, [Score=168, Expect=1e-49]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=186, Expect=5e-57]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=188, Expect=9e-59]} {RNA1509_4638, RNA1509_7416} {RNA1310_15816, RNA1509_7416} {RNA1509_7416, RNA815_8363} Mlig455_038057 {REF} {Length: 3500} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=141.7]; Ankyrin repeats (many copies) [PF13637.8, score=120.7]; Ankyrin repeat [PF00023.32, score=86.5]; Ankyrin repeats (many copies) [PF13857.8, score=81.7]; Ankyrin repeat [PF13606.8, score=79.6]; Mab-21 protein [PF03281.16, score=35.2]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=141, Expect=3e-33]; ENSG00000029534, ANK1, ankyrin 1, [Score=139, Expect=1e-32]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=139, Expect=7e-33]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=136, Expect=5e-32]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=132, Expect=5e-31]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=130, Expect=1e-30]} {RNA1509_38691} {RNA1310_3760} {RNA815_2084.1}
3.	MligTC455_38690	2233	46.53	Mlig455_011247	Neo: - Age: -	CTR9	1.684	-	-	-	0.728	0.956	-	Mlig455_011247 {REF} {Length: 3991} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=130.6]; Tetratricopeptide repeat [PF07719.19, score=126.2]; Tetratricopeptide repeat [PF14559.8, score=107.2]; Tetratricopeptide repeat [PF13181.8, score=105.4]; Tetratricopeptide repeat [PF13424.8, score=103.3]; Tetratricopeptide repeat [PF13428.8, score=87.8]; Tetratricopeptide repeat [PF13432.8, score=78.4]; Tetratricopeptide repeat [PF13431.8, score=78.1]; TPR repeat [PF13414.8, score=67.7]; Tetratricopeptide repeat [PF13176.8, score=62.0]; Tetratricopeptide repeat [PF13374.8, score=51.1]; Tetratricopeptide repeat [PF13174.8, score=40.0]; Soluble NSF attachment protein, SNAP [PF14938.8, score=39.5]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=36.0]; Tetratricopeptide repeat [PF07721.16, score=26.9]; Tetratricopeptide repeat [PF13371.8, score=26.2]} {Human: ENSG00000198730, CTR9, CTR9 homolog, Paf1/RNA polymerase II complex component, [RH, Score=952, Expect=0.0]} {Mouse: ENSMUSG00000005609, Ctr9, CTR9 homolog, Paf1/RNA polymerase II complex component, [RH, Score=953, Expect=0.0]} {Dmel: FBgn0035205, Ctr9, [RH, Score=890, Expect=0.0]} {Celegans: WBGene00007184, ctr-9, RNA polymerase-associated protein CTR9, [RH, Score=537, Expect=2e-172]} {Smed: dd_Smed_v6_2695_0_1, dd_Smed_v6_2695_0_1, [RH, Score=883, Expect=0.0]} {RNA1509_3063, RNA1509_47344} {RNA1310_2272.1, RNA1509_3063, RNA1509_47344} {RNA1509_3063, RNA1509_47344, RNA815_1958}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_25094

5055

105.32

Mlig455_032232

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.425

HNRNPA2B1

1.000

MligTC455_25095

11032

229.84

Mlig455_032222, Mlig455_032226, Mlig455_038057

Neo: -

Age: Down-Down-Up

ANK3, HNRNPA2B1

5.857

0.998

0.993

0.876

0.996

Mlig455_032222 {REF} {Length: 1767} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=124.6]; RNA recognition motif [PF16367.7, score=56.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=18.9]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=185, Expect=2e-56]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=186, Expect=4e-57]} {Dmel: FBgn0004237, Hrb87F, Heterogeneous nuclear ribonucleoprotein at 87F, [Score=168, Expect=1e-49]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=186, Expect=5e-57]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=188, Expect=9e-59]} {RNA1509_4638} {RNA1310_15816} {RNA815_8363}

Mlig455_032226 {REF} {Length: 1767} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=124.6]; RNA recognition motif [PF16367.7, score=56.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=18.9]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=185, Expect=2e-56]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=186, Expect=4e-57]} {Dmel: FBgn0004237, Hrb87F, Heterogeneous nuclear ribonucleoprotein at 87F, [Score=168, Expect=1e-49]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=186, Expect=5e-57]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=188, Expect=9e-59]} {RNA1509_4638, RNA1509_7416} {RNA1310_15816, RNA1509_7416} {RNA1509_7416, RNA815_8363}

Mlig455_038057 {REF} {Length: 3500} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=141.7]; Ankyrin repeats (many copies) [PF13637.8, score=120.7]; Ankyrin repeat [PF00023.32, score=86.5]; Ankyrin repeats (many copies) [PF13857.8, score=81.7]; Ankyrin repeat [PF13606.8, score=79.6]; Mab-21 protein [PF03281.16, score=35.2]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=141, Expect=3e-33]; ENSG00000029534, ANK1, ankyrin 1, [Score=139, Expect=1e-32]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=139, Expect=7e-33]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=136, Expect=5e-32]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=132, Expect=5e-31]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=130, Expect=1e-30]} {RNA1509_38691} {RNA1310_3760} {RNA815_2084.1}

MligTC455_38690

2233

46.53

Mlig455_011247

Neo: -

Age: -

CTR9

1.684

0.728

0.956

Mlig455_011247 {REF} {Length: 3991} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=130.6]; Tetratricopeptide repeat [PF07719.19, score=126.2]; Tetratricopeptide repeat [PF14559.8, score=107.2]; Tetratricopeptide repeat [PF13181.8, score=105.4]; Tetratricopeptide repeat [PF13424.8, score=103.3]; Tetratricopeptide repeat [PF13428.8, score=87.8]; Tetratricopeptide repeat [PF13432.8, score=78.4]; Tetratricopeptide repeat [PF13431.8, score=78.1]; TPR repeat [PF13414.8, score=67.7]; Tetratricopeptide repeat [PF13176.8, score=62.0]; Tetratricopeptide repeat [PF13374.8, score=51.1]; Tetratricopeptide repeat [PF13174.8, score=40.0]; Soluble NSF attachment protein, SNAP [PF14938.8, score=39.5]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=36.0]; Tetratricopeptide repeat [PF07721.16, score=26.9]; Tetratricopeptide repeat [PF13371.8, score=26.2]} {Human: ENSG00000198730, CTR9, CTR9 homolog, Paf1/RNA polymerase II complex component, [RH, Score=952, Expect=0.0]} {Mouse: ENSMUSG00000005609, Ctr9, CTR9 homolog, Paf1/RNA polymerase II complex component, [RH, Score=953, Expect=0.0]} {Dmel: FBgn0035205, Ctr9, [RH, Score=890, Expect=0.0]} {Celegans: WBGene00007184, ctr-9, RNA polymerase-associated protein CTR9, [RH, Score=537, Expect=2e-172]} {Smed: dd_Smed_v6_2695_0_1, dd_Smed_v6_2695_0_1, [RH, Score=883, Expect=0.0]} {RNA1509_3063, RNA1509_47344} {RNA1310_2272.1, RNA1509_3063, RNA1509_47344} {RNA1509_3063, RNA1509_47344, RNA815_1958}