TomoSeq data search

Data search

Results for MligTC455_25103

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_25103	523	10.90	Mlig455_015366	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.352	DNAJB2	Mlig455_015366 {REF} {Length: 2705} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=93.0]} {Human: ENSG00000135924, DNAJB2, DnaJ heat shock protein family (Hsp40) member B2, [RH, Score=166, Expect=4e-48]; ENSG00000105993, DNAJB6, DnaJ heat shock protein family (Hsp40) member B6, [RH, Score=159, Expect=1e-45]} {Mouse: ENSMUSG00000029131, Dnajb6, DnaJ heat shock protein family (Hsp40) member B6, [RH, Score=167, Expect=1e-48]; ENSMUSG00000026203, Dnajb2, DnaJ heat shock protein family (Hsp40) member B2, [RH, Score=162, Expect=5e-47]} {Dmel: FBgn0034091, mrj, [RH, Score=179, Expect=2e-54]} {Celegans: WBGene00001042, dnj-24, DNaJ domain (Prokaryotic heat shock protein), [Score=126, Expect=2e-34]} {Smed: dd_Smed_v6_2706_0_1, dd_Smed_v6_2706_0_1, [Score=191, Expect=1e-59]} {RNA1509_33222, RNA1509_45092, RNA1509_5498} {RNA1310_6537.1, RNA1509_33222, RNA1509_45092, RNA1509_5498} {RNA1509_33222, RNA1509_45092, RNA1509_5498, RNA815_14568}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25103

523

10.90

Mlig455_015366

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.352

DNAJB2

Mlig455_015366 {REF} {Length: 2705} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=93.0]} {Human: ENSG00000135924, DNAJB2, DnaJ heat shock protein family (Hsp40) member B2, [RH, Score=166, Expect=4e-48]; ENSG00000105993, DNAJB6, DnaJ heat shock protein family (Hsp40) member B6, [RH, Score=159, Expect=1e-45]} {Mouse: ENSMUSG00000029131, Dnajb6, DnaJ heat shock protein family (Hsp40) member B6, [RH, Score=167, Expect=1e-48]; ENSMUSG00000026203, Dnajb2, DnaJ heat shock protein family (Hsp40) member B2, [RH, Score=162, Expect=5e-47]} {Dmel: FBgn0034091, mrj, [RH, Score=179, Expect=2e-54]} {Celegans: WBGene00001042, dnj-24, DNaJ domain (Prokaryotic heat shock protein), [Score=126, Expect=2e-34]} {Smed: dd_Smed_v6_2706_0_1, dd_Smed_v6_2706_0_1, [Score=191, Expect=1e-59]} {RNA1509_33222, RNA1509_45092, RNA1509_5498} {RNA1310_6537.1, RNA1509_33222, RNA1509_45092, RNA1509_5498} {RNA1509_33222, RNA1509_45092, RNA1509_5498, RNA815_14568}

Cumulative graph for MligTC455_25103

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.009	3.744	0.36363	1.00000
RegionR2	1.167	3.744	0.02979	0.19518
RegionR3	0.421	3.744	0.29638	0.83805
RegionR4	0.366	3.744	0.43035	0.75858
RegionR5	-0.269	3.744	0.48828	0.85165
RegionR6	0.09	3.744	0.83808	1.00000
RegionR7	-0.482	3.744	0.39727	1.00000
RegionR8	-0.284	3.744	0.67868	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.067	3.744	0.97822	1.00000
RegenerationR2	-0.357	3.744	0.44113	0.84063
RegenerationR3	0.236	3.744	0.63790	0.92414
RegenerationR4	-0.392	3.744	0.43912	0.83644
RegenerationR5	0.433	3.744	0.35491	0.76767
RegenerationR6	0.639	3.744	0.22533	0.57063
RegenerationBL	-0.741	3.744	0.37669	0.74517
RegenerationTP	1.408	3.744	0.02554	0.27052

Genes with expression patterns similar to MligTC455_25103

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25103	523	10.9	Mlig455_015366	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.352	DNAJB2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015366 {REF} {Length: 2705} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=93.0]} {Human: ENSG00000135924, DNAJB2, DnaJ heat shock protein family (Hsp40) member B2, [RH, Score=166, Expect=4e-48]; ENSG00000105993, DNAJB6, DnaJ heat shock protein family (Hsp40) member B6, [RH, Score=159, Expect=1e-45]} {Mouse: ENSMUSG00000029131, Dnajb6, DnaJ heat shock protein family (Hsp40) member B6, [RH, Score=167, Expect=1e-48]; ENSMUSG00000026203, Dnajb2, DnaJ heat shock protein family (Hsp40) member B2, [RH, Score=162, Expect=5e-47]} {Dmel: FBgn0034091, mrj, [RH, Score=179, Expect=2e-54]} {Celegans: WBGene00001042, dnj-24, DNaJ domain (Prokaryotic heat shock protein), [Score=126, Expect=2e-34]} {Smed: dd_Smed_v6_2706_0_1, dd_Smed_v6_2706_0_1, [Score=191, Expect=1e-59]} {RNA1509_33222, RNA1509_45092, RNA1509_5498} {RNA1310_6537.1, RNA1509_33222, RNA1509_45092, RNA1509_5498} {RNA1509_33222, RNA1509_45092, RNA1509_5498, RNA815_14568}
2.	MligTC455_24351	667	13.89	Mlig455_039386	Neo: - Age: -		1.78	0.827	-	-	0.953	-	-	Mlig455_039386 {REF} {Length: 2901} {Pfam: Delta serrate ligand [PF01414.21, score=23.4]} {RNA1509_47006} {RNA1310_11541, RNA1509_47006} {RNA1509_47006, RNA815_3746.1}
3.	MligTC455_32857	1199	24.98	Mlig455_048242, Mlig455_048276	Neo: - Age: Up-Up-Down	IFIH1	0.955	-	-	-	0.955	-	-	Mlig455_048242 {REF} {Length: 3570} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=71.0]; Type III restriction enzyme, res subunit [PF04851.17, score=69.8]; Helicase conserved C-terminal domain [PF00271.33, score=59.7]; C-terminal domain of RIG-I [PF11648.10, score=31.8]; RIG-I receptor C-terminal domain [PF18119.3, score=29.2]; SWI2/SNF2 ATPase [PF18766.3, score=25.6]; AAA domain [PF13245.8, score=22.5]; AAA domain [PF13401.8, score=22.2]; PhoH-like protein [PF02562.18, score=18.3]} {Human: ENSG00000115267, IFIH1, interferon induced with helicase C domain 1, [Score=232, Expect=2e-62]; ENSG00000107201, DDX58, DExD/H-box helicase 58, [Score=228, Expect=7e-63]} {Mouse: ENSMUSG00000040296, Ddx58, DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, [Score=226, Expect=3e-61]; ENSMUSG00000017830, Dhx58, DEXH (Asp-Glu-X-His) box polypeptide 58, [Score=221, Expect=1e-60]; ENSMUSG00000026896, Ifih1, interferon induced with helicase C domain 1, [Score=218, Expect=4e-58]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [Score=98.6, Expect=1e-20]} {Celegans: WBGene00001090, drh-1, Dicer Related Helicase; Dicer-related helicase, [Score=189, Expect=2e-49]} {Smed: dd_Smed_v6_3742_0_2, dd_Smed_v6_3742_0_2, [Score=307, Expect=5e-88]} {RNA1509_59308} {RNA1310_3626.1} {RNA815_885.1} Mlig455_048276 {REF} {Length: 3580} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=71.0]; Type III restriction enzyme, res subunit [PF04851.17, score=69.8]; Helicase conserved C-terminal domain [PF00271.33, score=59.7]; C-terminal domain of RIG-I [PF11648.10, score=31.8]; RIG-I receptor C-terminal domain [PF18119.3, score=29.2]; SWI2/SNF2 ATPase [PF18766.3, score=25.6]; AAA domain [PF13245.8, score=22.5]; AAA domain [PF13401.8, score=22.2]; PhoH-like protein [PF02562.18, score=18.3]} {Human: ENSG00000115267, IFIH1, interferon induced with helicase C domain 1, [Score=232, Expect=2e-62]; ENSG00000107201, DDX58, DExD/H-box helicase 58, [Score=228, Expect=7e-63]} {Mouse: ENSMUSG00000040296, Ddx58, DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, [Score=226, Expect=3e-61]; ENSMUSG00000017830, Dhx58, DEXH (Asp-Glu-X-His) box polypeptide 58, [Score=221, Expect=1e-60]; ENSMUSG00000026896, Ifih1, interferon induced with helicase C domain 1, [Score=218, Expect=4e-58]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [Score=98.6, Expect=1e-20]} {Celegans: WBGene00001090, drh-1, Dicer Related Helicase; Dicer-related helicase, [Score=189, Expect=2e-49]} {Smed: dd_Smed_v6_3742_0_2, dd_Smed_v6_3742_0_2, [Score=307, Expect=5e-88]} {RNA1509_59308} {RNA1310_3626.1, RNA1509_59308} {RNA1509_59308, RNA815_885.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_25103

523

10.9

Mlig455_015366

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.352

DNAJB2

1.000

MligTC455_24351

667

13.89

Mlig455_039386

Neo: -

Age: -

1.78

0.827

0.953

Mlig455_039386 {REF} {Length: 2901} {Pfam: Delta serrate ligand [PF01414.21, score=23.4]} {RNA1509_47006} {RNA1310_11541, RNA1509_47006} {RNA1509_47006, RNA815_3746.1}

MligTC455_32857

1199

24.98

Mlig455_048242, Mlig455_048276

Neo: -

Age: Up-Up-Down

IFIH1

0.955

Mlig455_048242 {REF} {Length: 3570} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=71.0]; Type III restriction enzyme, res subunit [PF04851.17, score=69.8]; Helicase conserved C-terminal domain [PF00271.33, score=59.7]; C-terminal domain of RIG-I [PF11648.10, score=31.8]; RIG-I receptor C-terminal domain [PF18119.3, score=29.2]; SWI2/SNF2 ATPase [PF18766.3, score=25.6]; AAA domain [PF13245.8, score=22.5]; AAA domain [PF13401.8, score=22.2]; PhoH-like protein [PF02562.18, score=18.3]} {Human: ENSG00000115267, IFIH1, interferon induced with helicase C domain 1, [Score=232, Expect=2e-62]; ENSG00000107201, DDX58, DExD/H-box helicase 58, [Score=228, Expect=7e-63]} {Mouse: ENSMUSG00000040296, Ddx58, DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, [Score=226, Expect=3e-61]; ENSMUSG00000017830, Dhx58, DEXH (Asp-Glu-X-His) box polypeptide 58, [Score=221, Expect=1e-60]; ENSMUSG00000026896, Ifih1, interferon induced with helicase C domain 1, [Score=218, Expect=4e-58]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [Score=98.6, Expect=1e-20]} {Celegans: WBGene00001090, drh-1, Dicer Related Helicase; Dicer-related helicase, [Score=189, Expect=2e-49]} {Smed: dd_Smed_v6_3742_0_2, dd_Smed_v6_3742_0_2, [Score=307, Expect=5e-88]} {RNA1509_59308} {RNA1310_3626.1} {RNA815_885.1}

Mlig455_048276 {REF} {Length: 3580} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=71.0]; Type III restriction enzyme, res subunit [PF04851.17, score=69.8]; Helicase conserved C-terminal domain [PF00271.33, score=59.7]; C-terminal domain of RIG-I [PF11648.10, score=31.8]; RIG-I receptor C-terminal domain [PF18119.3, score=29.2]; SWI2/SNF2 ATPase [PF18766.3, score=25.6]; AAA domain [PF13245.8, score=22.5]; AAA domain [PF13401.8, score=22.2]; PhoH-like protein [PF02562.18, score=18.3]} {Human: ENSG00000115267, IFIH1, interferon induced with helicase C domain 1, [Score=232, Expect=2e-62]; ENSG00000107201, DDX58, DExD/H-box helicase 58, [Score=228, Expect=7e-63]} {Mouse: ENSMUSG00000040296, Ddx58, DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, [Score=226, Expect=3e-61]; ENSMUSG00000017830, Dhx58, DEXH (Asp-Glu-X-His) box polypeptide 58, [Score=221, Expect=1e-60]; ENSMUSG00000026896, Ifih1, interferon induced with helicase C domain 1, [Score=218, Expect=4e-58]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [Score=98.6, Expect=1e-20]} {Celegans: WBGene00001090, drh-1, Dicer Related Helicase; Dicer-related helicase, [Score=189, Expect=2e-49]} {Smed: dd_Smed_v6_3742_0_2, dd_Smed_v6_3742_0_2, [Score=307, Expect=5e-88]} {RNA1509_59308} {RNA1310_3626.1, RNA1509_59308} {RNA1509_59308, RNA815_885.1}