Data search
Results for MligTC455_25148
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25148 | 305 | 6.36 | Mlig455_063574 | Neo: - |
Mlig455_063574 {REF} {Length: 3279} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=36.4]} {RNA1509_23523} {RNA1310_17252, RNA1509_23523} {RNA1509_23523, RNA815_10237.1} |
Cumulative graph for MligTC455_25148
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.524 | 3.25 | 0.47715 | 1.00000 | |
| RegionR2 | 0.46 | 3.25 | 0.47417 | 0.85983 | |
| RegionR3 | -0.549 | 3.25 | 0.39171 | 0.92186 | |
| RegionR4 | 0.75 | 3.25 | 0.20198 | 0.48234 | |
| RegionR5 | 0.768 | 3.25 | 0.08448 | 0.27199 | |
| RegionR6 | -0.385 | 3.25 | 0.54278 | 1.00000 | |
| RegionR7 | 0.667 | 3.25 | 0.33218 | 0.96701 | |
| RegionR8 | -0.188 | 3.25 | 0.85821 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.236 | 3.25 | 0.94881 | 1.00000 | |
| RegenerationR2 | -0.212 | 3.25 | 0.62489 | 0.92479 | |
| RegenerationR3 | 0.784 | 3.25 | 0.13909 | 0.56513 | |
| RegenerationR4 | -0.384 | 3.25 | 0.44886 | 0.84109 | |
| RegenerationR5 | -0.175 | 3.25 | 0.68179 | 0.94415 | |
| RegenerationR6 | 0.42 | 3.25 | 0.44374 | 0.76649 | |
| RegenerationBL | 0.32 | 3.25 | 0.63664 | 0.97594 | |
| RegenerationTP | -0.699 | 3.25 | 0.41013 | 0.83724 |
Genes with expression patterns similar to MligTC455_25148
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25148 | 305 | 6.36 | Mlig455_063574 | Neo: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_063574 {REF} {Length: 3279} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=36.4]} {RNA1509_23523} {RNA1310_17252, RNA1509_23523} {RNA1509_23523, RNA815_10237.1} | |
| 2. | MligTC455_51562 | 331 | 6.9 | Mlig455_031005 | Neo: Irradiation Age: - |
RMI1 | 1.731 | 0.777 | - | - | - | - | 0.954 | Mlig455_031005 {REF} {Length: 2426} {TRANSSPLICED} {Pfam: RecQ mediated genome instability protein [PF08585.14, score=132.5]; Recq-mediated genome instability protein 1, C-terminal OB-fold [PF16099.7, score=41.0]} {Human: ENSG00000178966, RMI1, RecQ mediated genome instability 1, [RH, Score=120, Expect=1e-28]} {Mouse: ENSMUSG00000035367, Rmi1, RecQ mediated genome instability 1, [RH, Score=115, Expect=4e-26]} {Celegans: WBGene00011576, rmh-2, RMi1 (RMI1) Homolog, [Score=67.0, Expect=3e-11]} {Smed: dd_Smed_v6_15427_0_1, dd_Smed_v6_15427_0_1, [RH, Score=97.1, Expect=7e-21]} {RNA1509_19306} {RNA1310_8212.2} {RNA815_20681} |
| 3. | MligTC455_51193 | 241 | 5.01 | Mlig455_027440 | Neo: - Age: - |
RTCA | 1.67 | 0.717 | - | - | - | - | 0.953 | Mlig455_027440 {REF} {Length: 1735} {Pfam: RNA 3'-terminal phosphate cyclase [PF01137.23, score=248.1]; RNA 3'-terminal phosphate cyclase (RTC), insert domain [PF05189.15, score=83.3]} {Human: ENSG00000137996, RTCA, RNA 3'-terminal phosphate cyclase, [RH, Score=273, Expect=2e-88]} {Mouse: ENSMUSG00000000339, Rtca, RNA 3'-terminal phosphate cyclase, [RH, Score=275, Expect=2e-89]} {Dmel: FBgn0025630, Rtca, RNA 3'-terminal phosphate cyclase, [RH, Score=270, Expect=6e-88]} {Smed: dd_Smed_v6_4105_0_1, dd_Smed_v6_4105_0_1, [RH, Score=247, Expect=6e-79]} {RNA1509_56299} {RNA1310_17048, RNA1509_56299} {RNA1509_56299, RNA815_24947} |
| 4. | MligTC455_33368 | 446 | 9.3 | Mlig455_066579 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.602/0.00729 |
0.979 | - | - | - | - | - | 0.979 | Mlig455_066579 {REF} {Length: 459} {RNA1509_15945} {RNA1310_116094} {RNA815_55531} | |
| 5. | MligTC455_33367 | 988 | 20.59 | Mlig455_012493, Mlig455_012582 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 2.342 Region-enriched R4: 1.770/0.00164 |
ARHGAP32 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_012493 {REF} {Length: 5098} {Pfam: RhoGAP domain [PF00620.29, score=98.4]; Variant SH3 domain [PF14604.8, score=19.2]} {Human: ENSG00000134909, ARHGAP32, Rho GTPase activating protein 32, [RH, Score=157, Expect=7e-39]; ENSG00000004777, ARHGAP33, Rho GTPase activating protein 33, [RH, Score=153, Expect=9e-38]} {Mouse: ENSMUSG00000041444, Arhgap32, Rho GTPase activating protein 32, [RH, Score=156, Expect=1e-38]; ENSMUSG00000036882, Arhgap33, Rho GTPase activating protein 33, [RH, Score=154, Expect=3e-38]} {Dmel: FBgn0032821, CdGAPr, Cd GTPase activating protein-related, [RH, Score=147, Expect=5e-36]} {Celegans: WBGene00009800, rrc-1, GTPase-activating protein rrc-1, [RH, Score=129, Expect=9e-31]} {Smed: dd_Smed_v6_3975_0_1, dd_Smed_v6_3975_0_1, [Score=92.8, Expect=2e-19]} {RNA1509_26774, RNA1509_7306} {RNA1310_8928, RNA1509_26774} {RNA1509_26774, RNA815_3069.1} Mlig455_012582 {REF} {Length: 5103} {Pfam: RhoGAP domain [PF00620.29, score=98.4]; Variant SH3 domain [PF14604.8, score=19.2]} {Human: ENSG00000134909, ARHGAP32, Rho GTPase activating protein 32, [RH, Score=157, Expect=7e-39]; ENSG00000004777, ARHGAP33, Rho GTPase activating protein 33, [RH, Score=153, Expect=9e-38]} {Mouse: ENSMUSG00000041444, Arhgap32, Rho GTPase activating protein 32, [RH, Score=156, Expect=1e-38]; ENSMUSG00000036882, Arhgap33, Rho GTPase activating protein 33, [RH, Score=154, Expect=3e-38]} {Dmel: FBgn0032821, CdGAPr, Cd GTPase activating protein-related, [RH, Score=147, Expect=5e-36]} {Celegans: WBGene00009800, rrc-1, GTPase-activating protein rrc-1, [RH, Score=129, Expect=9e-31]} {Smed: dd_Smed_v6_3975_0_1, dd_Smed_v6_3975_0_1, [Score=92.8, Expect=2e-19]} {RNA1509_55710, RNA1509_7306} {RNA1310_8928, RNA1509_55710, RNA1509_7306} {RNA1509_55710, RNA1509_7306, RNA815_3069.1} |
| 6. | MligTC455_52958 | 2455 | 51.14 | Mlig455_041246, Mlig455_053091 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_041246 {REF} {Length: 1421} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=23.4]; GCN5-related N-acetyl-transferase [PF14542.8, score=22.2]; Acetyltransferase (GNAT) domain [PF13673.9, score=19.8]} {Dmel: FBgn0051248, CG31248, [RH, Score=56.2, Expect=3e-09]} {RNA1509_31872} {RNA1310_32135} {RNA815_16321.1} Mlig455_053091 {REF} {Length: 1430} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=23.4]; GCN5-related N-acetyl-transferase [PF14542.8, score=22.2]; Acetyltransferase (GNAT) domain [PF13673.9, score=19.8]} {Dmel: FBgn0051248, CG31248, [RH, Score=56.2, Expect=3e-09]} {RNA1509_31872, RNA1509_37364, RNA1509_45716} {RNA1310_32135, RNA1509_37364, RNA1509_45716} {RNA1509_37364, RNA1509_45716, RNA815_16321.1} |