TomoSeq data search

Data search

Results for MligTC455_25158

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25158

948

19.76

Mlig455_039451

Neo: -

Age: -

YWHAE

Mlig455_039451 {REF} {Length: 4143} {Pfam: 14-3-3 protein [PF00244.22, score=348.0]; Sodium:neurotransmitter symporter family [PF00209.20, score=222.5]} {Human: ENSG00000108953, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [RH, Score=384, Expect=2e-132]; ENSG00000274474, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [RH, Score=384, Expect=2e-132]} {Mouse: ENSMUSG00000020849, Ywhae, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide, [RH, Score=384, Expect=1e-132]} {Dmel: FBgn0020238, 14-3-3epsilon, [RH, Score=384, Expect=1e-132]} {Celegans: WBGene00001502, ftt-2, 14-3-3-like protein 2, [Score=311, Expect=6e-104]} {Smed: dd_Smed_v6_1702_0_1, dd_Smed_v6_1702_0_1, [RH, Score=347, Expect=4e-118]} {RNA1509_5197} {RNA1310_6272.1, RNA1509_5197} {RNA1509_5197, RNA815_5359.1}

Cumulative graph for MligTC455_25158

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.244	4.469	0.77655	1.00000
RegionR2	0.377	4.469	0.31790	0.70879
RegionR3	-0.581	4.469	0.09085	0.53212
RegionR4	-0.001	4.469	0.99824	1.00000
RegionR5	-0.161	4.469	0.61190	0.96890
RegionR6	-0.501	4.469	0.14675	0.68392
RegionR7	-0.062	4.469	0.88241	1.00000
RegionR8	0.684	4.469	0.11980	0.63742

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.904	4.469	0.47932	1.00000
RegenerationR2	-0.376	4.469	0.29155	0.73441
RegenerationR3	-0.39	4.469	0.34848	0.76987
RegenerationR4	-0.51	4.469	0.22662	0.67518
RegenerationR5	-0.285	4.469	0.46309	0.83838
RegenerationR6	0.023	4.469	0.95637	1.00000
RegenerationBL	-0.201	4.469	0.64910	0.98582
RegenerationTP	-0.304	4.469	0.50379	0.90265

Genes with expression patterns similar to MligTC455_25158

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25158	948	19.76	Mlig455_039451	Neo: - Age: -	YWHAE	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039451 {REF} {Length: 4143} {Pfam: 14-3-3 protein [PF00244.22, score=348.0]; Sodium:neurotransmitter symporter family [PF00209.20, score=222.5]} {Human: ENSG00000108953, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [RH, Score=384, Expect=2e-132]; ENSG00000274474, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [RH, Score=384, Expect=2e-132]} {Mouse: ENSMUSG00000020849, Ywhae, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide, [RH, Score=384, Expect=1e-132]} {Dmel: FBgn0020238, 14-3-3epsilon, [RH, Score=384, Expect=1e-132]} {Celegans: WBGene00001502, ftt-2, 14-3-3-like protein 2, [Score=311, Expect=6e-104]} {Smed: dd_Smed_v6_1702_0_1, dd_Smed_v6_1702_0_1, [RH, Score=347, Expect=4e-118]} {RNA1509_5197} {RNA1310_6272.1, RNA1509_5197} {RNA1509_5197, RNA815_5359.1}
2.	MligTC455_18787	963	20.06	Mlig455_014022	Neo: - Age: - Region-enriched R2: 1.334/0.03482	STRC	2.526	0.835	-	0.953	-	0.738	-	Mlig455_014022 {REF} {Length: 5754} {Human: ENSG00000242866, STRC, stereocilin, [RH, Score=76.3, Expect=4e-13]} {Mouse: ENSMUSG00000033498, Strc, stereocilin, [RH, Score=80.9, Expect=1e-14]} {RNA1509_4378} {RNA1310_1493.1, RNA1509_4378} {RNA1509_4378, RNA815_804}
3.	MligTC455_47600	263	5.48	Mlig455_031414	Neo: - Age: - Region-enriched R2: 2.961/0.01561	NRXN1	1.837	0.885	-	-	-	0.952	-	Mlig455_031414 {REF} {Length: 4843} {Pfam: Laminin G domain [PF02210.26, score=235.7]; Laminin G domain [PF00054.25, score=191.1]; Syndecan domain [PF01034.22, score=26.0]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=22.3]; EGF-like domain [PF00008.29, score=19.4]} {Human: ENSG00000179915, NRXN1, neurexin 1, [RH, Score=379, Expect=3e-109]} {Mouse: ENSMUSG00000024109, Nrxn1, neurexin I, [Score=387, Expect=1e-112]} {Dmel: FBgn0038975, Nrx-1, Neurexin 1, [Score=313, Expect=5e-87]} {Celegans: WBGene00007799, nrx-1, NRX-1 beta isoform; NeuReXin related, [Score=179, Expect=2e-45]} {Smed: dd_Smed_v6_13697_0_1, dd_Smed_v6_13697_0_1, [Score=349, Expect=9e-101]} {RNA1509_55888} {RNA1310_9438.1} {RNA815_24775.1}
4.	MligTC455_39067	1049	21.85	Mlig455_015577	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.515	GSTP1	0.954	-	-	0.954	-	-	-	Mlig455_015577 {REF} {Length: 1133} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=55.5]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=34.0]; Glutathione S-transferase, N-terminal domain [PF13417.8, score=26.7]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=26.1]; Glutathione S-transferase N-terminal domain [PF17172.6, score=20.4]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=20.2]} {Human: ENSG00000084207, GSTP1, glutathione S-transferase pi 1, [Score=137, Expect=3e-40]} {Mouse: ENSMUSG00000060803, Gstp1, glutathione S-transferase, pi 1, [Score=142, Expect=2e-42]; ENSMUSG00000097830, Gstp1, glutathione S-transferase, pi 1, [Score=142, Expect=2e-42]; ENSMUSG00000038155, Gstp2, glutathione S-transferase, pi 2, [Score=140, Expect=3e-41]; ENSMUSG00000097808, Gstp2, glutathione S-transferase, pi 2, [Score=140, Expect=3e-41]} {Dmel: FBgn0010226, GstS1, Glutathione S transferase S1, [RH, Score=101, Expect=5e-26]} {Celegans: WBGene00001749, gst-1, Glutathione S-transferase P, [RH, Score=145, Expect=1e-43]} {Smed: dd_Smed_v6_20_0_1, dd_Smed_v6_20_0_1, [Score=93.2, Expect=1e-23]} {RNA1509_48479, RNA1509_6171} {RNA1310_28502.1, RNA1509_48479} {RNA1509_48479, RNA815_13314}

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