M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_25182

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25182 2994 62.37 Mlig455_008527, Mlig455_008554, Mlig455_018199

Neo: Int S/G2/M

Age: -

Region-enriched R7: 1.056/0.00205

 CEL

Mlig455_008527 {REF} {Length: 2684} {TRANSSPLICED} {Human: ENSG00000170835, CEL, carboxyl ester lipase, [Score=94.4, Expect=2e-19]} {RNA1509_9307} {RNA1310_10859} {RNA815_7251}

Mlig455_008554 {REF} {Length: 2684} {TRANSSPLICED} {Human: ENSG00000170835, CEL, carboxyl ester lipase, [Score=92.0, Expect=1e-18]} {RNA1509_9307} {RNA1310_10859} {RNA815_7251}

Mlig455_018199 {REF} {Length: 3241} {Human: ENSG00000170835, CEL, carboxyl ester lipase, [Score=86.3, Expect=8e-17]} {RNA1509_9307} {RNA1310_10859} {RNA815_7251}

Cumulative graph for MligTC455_25182

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.02 6.18 0.11825 0.70772
RegionR2 0.198 6.18 0.47625 0.86140
RegionR3 0.279 6.18 0.21009 0.75151
RegionR4 0.244 6.18 0.33611 0.65499
RegionR5 0.268 6.18 0.19326 0.47868
RegionR6 0.023 6.18 0.92202 1.00000
RegionR7 1.056 6.18 0.00003 0.00205
RegionR8 -1.048 6.18 0.01677 0.25227

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.605 6.18 0.17129 0.91495
RegenerationR2 0.235 6.18 0.30371 0.74469
RegenerationR3 0.009 6.18 0.97226 1.00000
RegenerationR4 0.22 6.18 0.38398 0.80371
RegenerationR5 0.445 6.18 0.05311 0.37011
RegenerationR6 0.924 6.18 0.00018 0.01255
RegenerationBL 0.231 6.18 0.43133 0.79931
RegenerationTP -0.042 6.18 0.90454 1.00000


Genes with expression patterns similar to MligTC455_25182

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25182 2994 62.37 Mlig455_008527, Mlig455_008554, Mlig455_018199

Neo: Int S/G2/M

Age: -

Region-enriched R7: 1.056/0.00205

 CEL 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_008527 {REF} {Length: 2684} {TRANSSPLICED} {Human: ENSG00000170835, CEL, carboxyl ester lipase, [Score=94.4, Expect=2e-19]} {RNA1509_9307} {RNA1310_10859} {RNA815_7251}

Mlig455_008554 {REF} {Length: 2684} {TRANSSPLICED} {Human: ENSG00000170835, CEL, carboxyl ester lipase, [Score=92.0, Expect=1e-18]} {RNA1509_9307} {RNA1310_10859} {RNA815_7251}

Mlig455_018199 {REF} {Length: 3241} {Human: ENSG00000170835, CEL, carboxyl ester lipase, [Score=86.3, Expect=8e-17]} {RNA1509_9307} {RNA1310_10859} {RNA815_7251}
2. MligTC455_48060 1906 39.72 Mlig455_035503

Neo: -

Age: -

 METTL25 2.455 0.743 - - 0.952 - 0.760 Mlig455_035503 {REF} {Length: 2342} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13679.8, score=95.0]} {Human: ENSG00000127720, METTL25, methyltransferase like 25, [RH, Score=148, Expect=9e-38]} {Mouse: ENSMUSG00000036009, Mettl25, methyltransferase like 25, [RH, Score=148, Expect=5e-38]} {Dmel: FBgn0053964, CG33964, [RH, Score=169, Expect=2e-46]} {Celegans: WBGene00009123, F25H2.12, [Score=82.4, Expect=1e-16]} {Smed: dd_Smed_v6_8481_0_1, dd_Smed_v6_8481_0_1, [RH, Score=253, Expect=5e-78]} {RNA1509_55706, RNA1509_7183} {RNA1310_9805, RNA1509_55706, RNA1509_7183} {RNA1509_55706, RNA1509_7183, RNA815_3309.1}
3. MligTC455_19035 844 17.59 Mlig455_021348

Neo: Int S/G2/M

Age: -

 RRNAD1 1.823 - - - 0.851 0.972 - Mlig455_021348 {REF} {Length: 1950} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13679.8, score=69.0]} {Human: ENSG00000143303, RRNAD1, ribosomal RNA adenine dimethylase domain containing 1, [RH, Score=106, Expect=7e-24]} {Mouse: ENSMUSG00000004896, Rrnad1, ribosomal RNA adenine dimethylase domain containing 1, [RH, Score=98.6, Expect=1e-21]} {Dmel: FBgn0033240, CG2906, [RH, Score=88.6, Expect=2e-18]} {Celegans: WBGene00009123, F25H2.12, [RH, Score=80.9, Expect=6e-16]} {Smed: dd_Smed_v6_15897_0_3, dd_Smed_v6_15897_0_3, [RH, Score=84.3, Expect=3e-17]} {RNA1509_18499} {RNA1310_12295} {RNA815_15462.1}
4. MligTC455_36751 882 18.37 Mlig455_003158, Mlig455_003357

Neo: -

Age: -

Region-enriched R5: 1.163/0.00289

 BORCS8-MEF2B 1.788 - - - 0.826 0.962 -

Mlig455_003158 {REF} {Length: 1554} {TRANSSPLICED} {Pfam: BLOC-1-related complex sub-unit 8 [PF10167.11, score=102.8]} {Human: ENSG00000064489, BORCS8-MEF2B, BORCS8-MEF2B readthrough, [RH, Score=67.4, Expect=3e-13]; ENSG00000254901, BORCS8, BLOC-1 related complex subunit 8, [RH, Score=67.4, Expect=3e-13]} {Mouse: ENSMUSG00000002345, Borcs8, BLOC-1 related complex subunit 8, [RH, Score=70.1, Expect=2e-14]} {Dmel: FBgn0052590, CG32590, [RH, Score=100, Expect=1e-24]} {Celegans: WBGene00010767, blos-9, BLOC-1-related complex subunit 8 homolog, [RH, Score=92.4, Expect=3e-22]} {Smed: dd_Smed_v6_6033_1_3, dd_Smed_v6_6033_1_3, [RH, Score=87.8, Expect=1e-20]} {RNA1509_24406, RNA1509_9744} {RNA1310_20299, RNA1509_24406, RNA1509_9744} {RNA1509_24406, RNA1509_9744, RNA815_15147}

Mlig455_003357 {REF} {Length: 1554} {TRANSSPLICED} {RNA1509_24406} {RNA1310_20299} {RNA815_15147}
5. MligTC455_37098 996 20.75 Mlig455_012279

Neo: Neoblast

Age: Up-Down-Up, logFC(26M/2M)=0.528

Region-enriched R4: 1.139/0.02113

 1.741 - - - 0.974 0.767 - Mlig455_012279 {REF} {Length: 197} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15555} {RNA1310_36361.1} {RNA815_342.1}
6. MligTC455_52177 456 9.49 Mlig455_040768, Mlig455_066770

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.629

 CYP2J2 1.701 - - - 0.749 0.952 -

Mlig455_040768 {REF} {Length: 2027} {Pfam: Cytochrome P450 [PF00067.24, score=317.4]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=266, Expect=6e-83]} {Mouse: ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=258, Expect=8e-80]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=257, Expect=2e-79]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=253, Expect=6e-78]; ENSMUSG00000066097, Cyp2j11, cytochrome P450, family 2, subfamily j, polypeptide 11, [Score=248, Expect=4e-76]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=248, Expect=9e-76]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [Score=246, Expect=3e-75]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=216, Expect=1e-63]} {Celegans: WBGene00018413, cyp-33C4, CYtochrome P450 family, [RH, Score=265, Expect=7e-83]} {Smed: dd_Smed_v6_2351_0_1, dd_Smed_v6_2351_0_1, [RH, Score=277, Expect=2e-87]} {RNA1509_8857} {RNA1310_15197, RNA1509_8857} {RNA1509_8857, RNA815_5354}

Mlig455_066770 {REF} {Length: 1856} {Pfam: Cytochrome P450 [PF00067.24, score=41.1]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=68.9, Expect=2e-12]} {Mouse: ENSMUSG00000082932, Cyp2j8, cytochrome P450, family 2, subfamily j, polypeptide 8, [Score=64.3, Expect=6e-11]; ENSMUSG00000015224, Cyp2j9, cytochrome P450, family 2, subfamily j, polypeptide 9, [Score=63.5, Expect=1e-10]; ENSMUSG00000049685, Cyp2g1, cytochrome P450, family 2, subfamily g, polypeptide 1, [Score=62.0, Expect=3e-10]; ENSMUSG00000022818, Cyp2ab1, cytochrome P450, family 2, subfamily ab, polypeptide 1, [Score=62.0, Expect=3e-10]; ENSMUSG00000066097, Cyp2j11, cytochrome P450, family 2, subfamily j, polypeptide 11, [Score=61.2, Expect=5e-10]; ENSMUSG00000030483, Cyp2b10, cytochrome P450, family 2, subfamily b, polypeptide 10, [Score=61.2, Expect=7e-10]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [Score=61.2, Expect=6e-10]} {Dmel: FBgn0036910, Cyp305a1, [Score=47.4, Expect=1e-05]} {Celegans: WBGene00015709, cyp-33A1, CYtochrome P450 family, [Score=83.6, Expect=2e-17]} {Smed: dd_Smed_v6_2351_0_2, dd_Smed_v6_2351_0_2, [Score=91.7, Expect=2e-20]} {RNA1509_8857} {RNA1310_15197} {RNA815_5354}
7. MligTC455_23167 700 14.59 Mlig455_010329

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.892

Region-enriched R5: 1.299/0.01836

 BICD2 1.679 - - - 0.956 0.723 - Mlig455_010329 {REF} {Length: 4422} {Pfam: Microtubule-associated protein Bicaudal-D [PF09730.11, score=113.9]} {Human: ENSG00000185963, BICD2, BICD cargo adaptor 2, [Score=119, Expect=5e-29]; ENSG00000151746, BICD1, BICD cargo adaptor 1, [Score=116, Expect=7e-31]} {Mouse: ENSMUSG00000003452, Bicd1, BICD cargo adaptor 1, [Score=119, Expect=1e-32]; ENSMUSG00000037933, Bicd2, BICD cargo adaptor 2, [Score=118, Expect=5e-29]} {Dmel: FBgn0000183, BicD, Bicaudal D, [Score=119, Expect=1e-29]} {Celegans: WBGene00016611, bicd-1, BICaudal D (Drosophila) homolog, [Score=84.0, Expect=1e-17]} {Smed: dd_Smed_v6_758_0_1, dd_Smed_v6_758_0_1, [Score=105, Expect=7e-25]} {RNA1509_12040, RNA1509_55648} {RNA1310_24140.1, RNA1509_55648} {RNA1509_55648, RNA815_7397}
8. MligTC455_28514 12909 268.93 Mlig455_020154

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.312

Region-enriched R5: 1.130/0.00016

 0.959 - - - 0.959 - - Mlig455_020154 {REF} {Length: 1024} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=78.2]} {Celegans: WBGene00003990, pfn-2, Profilin-2, [Score=42.7, Expect=8e-06]} {RNA1509_11294, RNA1509_1619, RNA1509_2181, RNA1509_5203, RNA1509_5839} {RNA1310_31962, RNA1509_11294, RNA1509_1619, RNA1509_2181, RNA1509_5203, RNA1509_5839} {RNA1509_11294, RNA1509_1619, RNA1509_2181, RNA1509_5203, RNA1509_5839, RNA815_14957.1}
9. MligTC455_46200 2796 58.25 Mlig455_034025, Mlig455_060403

Neo: Int S/G2/M

Age: -

Region-specific R5: 1.725

Region-enriched R5: 1.218/0.00004

 OXA1L 0.955 - - - 0.955 - -

Mlig455_034025 {REF} {Length: 1735} {TRANSSPLICED} {Human: ENSG00000155463, OXA1L, OXA1L, mitochondrial inner membrane protein, [Score=68.6, Expect=7e-12]} {Mouse: ENSMUSG00000000959, Oxa1l, oxidase assembly 1-like, [Score=73.6, Expect=1e-13]} {Dmel: FBgn0027615, CG6404, [Score=96.7, Expect=2e-21]} {Celegans: WBGene00007215, oxa-1, OXA mitochondrial inner membrane insertase homolog, [Score=68.9, Expect=1e-12]} {Smed: dd_Smed_v6_4072_0_1, dd_Smed_v6_4072_0_1, [Score=86.3, Expect=3e-18]} {RNA1509_31165, RNA1509_39218} {RNA1310_17991, RNA1509_31165, RNA1509_39218} {RNA1509_31165, RNA1509_39218, RNA815_490.2}

Mlig455_060403 {REF} {Length: 1732} {TRANSSPLICED} {Human: ENSG00000155463, OXA1L, OXA1L, mitochondrial inner membrane protein, [Score=68.6, Expect=6e-12]} {Mouse: ENSMUSG00000000959, Oxa1l, oxidase assembly 1-like, [Score=73.6, Expect=1e-13]} {Dmel: FBgn0027615, CG6404, [Score=94.0, Expect=2e-20]} {Celegans: WBGene00007215, oxa-1, OXA mitochondrial inner membrane insertase homolog, [Score=69.3, Expect=1e-12]} {Smed: dd_Smed_v6_4072_0_1, dd_Smed_v6_4072_0_1, [Score=86.7, Expect=2e-18]} {RNA1509_18325, RNA1509_39218, RNA1509_45152} {RNA1310_17991, RNA1509_18325, RNA1509_45152} {RNA1509_18325, RNA1509_45152, RNA815_490.2}
10. MligTC455_42741 2288 47.67 Mlig455_046347

Neo: Irradiation

Age: -

Region-enriched R5: 1.366/0.00007

 DOHH 0.951 - - - 0.951 - - Mlig455_046347 {REF} {Length: 1133} {TRANSSPLICED} {Pfam: HEAT repeats [PF13646.8, score=101.0]; PBS lyase HEAT-like repeat [PF03130.18, score=74.8]; HEAT repeat [PF02985.24, score=30.8]; HEAT-like repeat [PF13513.8, score=20.1]} {Human: ENSG00000129932, DOHH, deoxyhypusine hydroxylase, [RH, Score=224, Expect=3e-71]} {Mouse: ENSMUSG00000078440, Dohh, deoxyhypusine hydroxylase/monooxygenase, [RH, Score=233, Expect=1e-74]} {Dmel: FBgn0261479, nero, [RH, Score=234, Expect=2e-75]} {Celegans: WBGene00007555, dohh-1, Deoxyhypusine hydroxylase, [RH, Score=239, Expect=1e-77]} {Smed: dd_Smed_v6_10657_0_1, dd_Smed_v6_10657_0_1, [RH, Score=244, Expect=9e-80]} {RNA1509_10547, RNA1509_23337} {RNA1310_30548, RNA1509_10547, RNA1509_23337} {RNA1509_10547, RNA1509_23337, RNA815_13793}
11. MligTC455_45756 1386 28.87 Mlig455_056548

Neo: -

Age: logFC(26M/2M)=0.374

Region-enriched R4: 1.264/0.03393

 0.95 - - - 0.950 - - Mlig455_056548 {REF} {Length: 1543} {TRANSSPLICED} {RNA1509_6228} {RNA1310_7664.2} {RNA815_8469}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA