Data search
Results for MligTC455_25253
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25253 | 477 | 9.93 | Mlig455_011697 | Neo: - Age: - Region-enriched R5: 1.361/0.01814 |
Mlig455_011697 {REF} {Length: 1763} {RNA1509_49186} {RNA1310_21634.1, RNA1509_49186} {RNA1509_49186, RNA815_12896} |
Cumulative graph for MligTC455_25253
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.95 | 3.693 | 0.51056 | 1.00000 | |
| RegionR2 | -0.238 | 3.693 | 0.71042 | 1.00000 | |
| RegionR3 | 0.107 | 3.693 | 0.83598 | 1.00000 | |
| RegionR4 | 0.603 | 3.693 | 0.29155 | 0.60252 | |
| RegionR5 | 1.361 | 3.693 | 0.00211 | 0.01814 | |
| RegionR6 | -0.033 | 3.693 | 0.95796 | 1.00000 | |
| RegionR7 | 0.89 | 3.693 | 0.14438 | 0.70831 | |
| RegionR8 | -1.74 | 3.693 | 0.15964 | 0.72324 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.442 | 3.693 | 0.19346 | 0.93158 | |
| RegenerationR2 | -0.209 | 3.693 | 0.66493 | 0.94346 | |
| RegenerationR3 | -0.008 | 3.693 | 0.98976 | 1.00000 | |
| RegenerationR4 | -0.063 | 3.693 | 0.90516 | 1.00000 | |
| RegenerationR5 | -0.086 | 3.693 | 0.84082 | 1.00000 | |
| RegenerationR6 | 0.461 | 3.693 | 0.37445 | 0.71666 | |
| RegenerationBL | 0.179 | 3.693 | 0.79079 | 1.00000 | |
| RegenerationTP | 1.051 | 3.693 | 0.18617 | 0.62291 |
Genes with expression patterns similar to MligTC455_25253
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25253 | 477 | 9.93 | Mlig455_011697 | Neo: - Age: - Region-enriched R5: 1.361/0.01814 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011697 {REF} {Length: 1763} {RNA1509_49186} {RNA1310_21634.1, RNA1509_49186} {RNA1509_49186, RNA815_12896} | |
| 2. | MligTC455_18742 | 230 | 4.8 | Mlig455_007056 | Neo: - Age: - |
NFIL3 | 1.698 | - | 0.739 | - | - | - | 0.959 | Mlig455_007056 {REF} {Length: 4414} {Pfam: Basic region leucine zipper [PF07716.17, score=56.2]; bZIP transcription factor [PF00170.23, score=30.5]} {Human: ENSG00000165030, NFIL3, nuclear factor, interleukin 3 regulated, [RH, Score=88.2, Expect=6e-18]} {Mouse: ENSMUSG00000056749, Nfil3, nuclear factor, interleukin 3, regulated, [RH, Score=88.2, Expect=4e-18]} {Dmel: FBgn0016076, vri, vrille, [RH, Score=89.0, Expect=3e-18]} {Celegans: WBGene00000220, atf-2, ATF (cAMP-dependent transcription factor) family, [RH, Score=74.7, Expect=3e-14]} {Smed: dd_Smed_v6_9007_0_1, dd_Smed_v6_9007_0_1, [RH, Score=75.9, Expect=9e-15]} {RNA1509_16571, RNA1509_33236, RNA1509_36235, RNA1509_58992} {RNA1310_8111.1, RNA1509_16571, RNA1509_33236, RNA1509_36235, RNA1509_58992} {RNA1509_16571, RNA1509_33236, RNA1509_36235, RNA1509_58992, RNA815_15424} |
| 3. | MligTC455_25822 | 4618 | 96.21 | Mlig455_021919 | Neo: - Age: - |
OSTC | 1.696 | - | - | 0.730 | - | 0.966 | - | Mlig455_021919 {REF} {Length: 1992} {Pfam: OST3 / OST6 family, transporter family [PF04756.15, score=32.6]} {Human: ENSG00000198856, OSTC, oligosaccharyltransferase complex non-catalytic subunit, [RH, Score=211, Expect=4e-71]} {Mouse: ENSMUSG00000041084, Ostc, oligosaccharyltransferase complex subunit (non-catalytic), [RH, Score=210, Expect=7e-71]} {Dmel: FBgn0031529, CG9662, [RH, Score=189, Expect=2e-62]} {Smed: dd_Smed_v6_3467_0_1, dd_Smed_v6_3467_0_1, [RH, Score=204, Expect=6e-69]} {RNA1509_5118, RNA1509_6693, RNA1509_9520} {RNA1310_32278, RNA1509_5118, RNA1509_6693, RNA1509_9520} {RNA1509_5118, RNA1509_6693, RNA1509_9520, RNA815_14195} |
| 4. | MligTC455_23740 | 1218 | 25.37 | Mlig455_000038, Mlig455_063713 | Neo: Irradiation Age: logFC(26M/2M)=0.278 Region-enriched R5: 1.383/0.00468 |
PHF12 | 0.982 | - | - | - | - | 0.982 | - | Mlig455_000038 {REF} {Length: 1716} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=24.6]} {Human: ENSG00000109118, PHF12, PHD finger protein 12, [Score=49.3, Expect=1e-05]} {Mouse: ENSMUSG00000037791, Phf12, PHD finger protein 12, [Score=49.7, Expect=5e-06]} {Dmel: FBgn0029861, CG3815, [Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_11130_0_1, dd_Smed_v6_11130_0_1, [Score=67.4, Expect=4e-12]} {RNA1509_9193} {RNA1310_19766} {RNA815_49145} Mlig455_063713 {REF} {Length: 1638} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=25.4]} {Dmel: FBgn0029861, CG3815, [Score=54.7, Expect=8e-08]} {Smed: dd_Smed_v6_11130_0_1, dd_Smed_v6_11130_0_1, [Score=58.5, Expect=3e-09]} {RNA1509_9193} {RNA1310_19766} {RNA815_49145} |
| 5. | MligTC455_23739 | 655 | 13.65 | Mlig455_000004 | Neo: Irradiation Age: - Region-enriched R5: 1.240/0.00866 |
CHMP5 | 0.979 | - | - | - | - | 0.979 | - | Mlig455_000004 {REF} {Length: 2571} {Pfam: Snf7 [PF03357.23, score=164.6]; PHD-finger [PF00628.31, score=28.4]} {Human: ENSG00000086065, CHMP5, charged multivesicular body protein 5, [Score=243, Expect=3e-76]} {Mouse: ENSMUSG00000028419, Chmp5, charged multivesicular body protein 5, [Score=243, Expect=2e-76]} {Dmel: FBgn0036740, Vps60, Vacuolar protein sorting 60, [Score=239, Expect=1e-74]} {Celegans: WBGene00018290, vps-60, Related to yeast Vacuolar Protein Sorting factor, [Score=242, Expect=3e-76]} {Smed: dd_Smed_v6_1158_0_1, dd_Smed_v6_1158_0_1, [Score=285, Expect=2e-92]} {RNA1509_9193} {RNA1310_19766} {RNA815_24268} |
| 6. | MligTC455_36922 | 97 | 2.03 | Mlig455_042982 | Neo: - Age: - |
EHBP1L1 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_042982 {REF} {Length: 4415} {TRANSSPLICED} {Pfam: Bivalent Mical/EHBP Rab binding domain [PF12130.10, score=114.1]; Calponin homology (CH) domain [PF00307.33, score=78.3]; N-terminal C2 in EEIG1 and EHBP1 proteins [PF10358.11, score=49.9]; CAMSAP CH domain [PF11971.10, score=22.7]} {Human: ENSG00000173442, EHBP1L1, EH domain binding protein 1 like 1, [RH, Score=297, Expect=8e-92]} {Mouse: ENSMUSG00000024937, Ehbp1l1, EH domain binding protein 1-like 1, [RH, Score=299, Expect=2e-89]} {Dmel: FBgn0034180, Ehbp1, Eps15 homology domain containing protein-binding protein 1, [RH, Score=164, Expect=1e-41]} {Celegans: WBGene00009098, ehbp-1, EH (Eps-15-homology) domain Binding Protein family, [RH, Score=123, Expect=1e-28]} {Smed: dd_Smed_v6_5788_0_1, dd_Smed_v6_5788_0_1, [RH, Score=395, Expect=2e-126]} {RNA1509_4997} {RNA1310_4043} {RNA815_4057} |
| 7. | MligTC455_53223 | 1757 | 36.59 | Mlig455_018662, Mlig455_018864 | Neo: - Age: - |
AC118553.2 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_018662 {REF} {Length: 3551} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=118.8]; MFS_1 like family [PF12832.9, score=37.9]} {Human: ENSG00000283761, AC118553.2, novel protein, [RH, Score=536, Expect=0.0]; ENSG00000156875, MFSD14A, major facilitator superfamily domain containing 14A, [RH, Score=534, Expect=0.0]; ENSG00000148110, MFSD14B, major facilitator superfamily domain containing 14B, [RH, Score=525, Expect=0.0]} {Mouse: ENSMUSG00000089911, Mfsd14a, major facilitator superfamily domain containing 14A, [RH, Score=534, Expect=0.0]; ENSMUSG00000038212, Mfsd14b, major facilitator superfamily domain containing 14B, [RH, Score=528, Expect=0.0]} {Dmel: FBgn0035400, CG11537, [RH, Score=514, Expect=1e-176]} {Celegans: WBGene00020798, T25D3.4, [RH, Score=478, Expect=2e-164]} {Smed: dd_Smed_v6_5693_0_1, dd_Smed_v6_5693_0_1, [RH, Score=597, Expect=0.0]} {RNA1509_4109} {RNA1310_7829} {RNA815_2618} Mlig455_018864 {REF} {Length: 3544} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=118.3]; MFS_1 like family [PF12832.9, score=37.8]} {Human: ENSG00000283761, AC118553.2, novel protein, [RH, Score=536, Expect=0.0]; ENSG00000156875, MFSD14A, major facilitator superfamily domain containing 14A, [RH, Score=534, Expect=0.0]; ENSG00000148110, MFSD14B, major facilitator superfamily domain containing 14B, [RH, Score=525, Expect=0.0]} {Mouse: ENSMUSG00000089911, Mfsd14a, major facilitator superfamily domain containing 14A, [RH, Score=534, Expect=0.0]; ENSMUSG00000038212, Mfsd14b, major facilitator superfamily domain containing 14B, [RH, Score=527, Expect=0.0]} {Dmel: FBgn0035400, CG11537, [RH, Score=510, Expect=3e-175]} {Celegans: WBGene00020798, T25D3.4, [RH, Score=478, Expect=2e-164]} {Smed: dd_Smed_v6_5693_0_1, dd_Smed_v6_5693_0_1, [RH, Score=602, Expect=0.0]} {RNA1509_25144, RNA1509_4109, RNA1509_46122} {RNA1310_7829, RNA1509_25144, RNA1509_4109, RNA1509_46122} {RNA1509_25144, RNA1509_4109, RNA1509_46122, RNA815_2618} |
| 8. | MligTC455_36008 | 404 | 8.41 | Mlig455_055395 | Neo: - Age: logFC(26M/2M)=0.738 |
0.959 | - | - | - | - | - | 0.959 | Mlig455_055395 {REF} {Length: 2036} {RNA1509_14528} {RNA1310_31437} {RNA815_14226} | |
| 9. | MligTC455_38621 | 255 | 5.32 | Mlig455_065731 | Neo: - Age: - Region-enriched R4: 2.530/0.02260 |
GPATCH4 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_065731 {REF} {Length: 2194} {Pfam: G-patch domain [PF01585.25, score=43.0]; G-patch domain [PF12656.9, score=36.8]; MOFRL family [PF05161.15, score=21.1]} {Human: ENSG00000160818, GPATCH4, G-patch domain containing 4, [RH, Score=78.2, Expect=2e-16]} {Mouse: ENSMUSG00000028069, Gpatch4, G patch domain containing 4, [RH, Score=79.0, Expect=1e-16]} {Dmel: FBgn0039829, CG15561, [RH, Score=80.5, Expect=2e-17]} {Celegans: WBGene00020346, rbm-5, RNA Binding Motif protein homolog, [Score=47.0, Expect=4e-06]} {RNA1509_30463, RNA1509_46067, RNA1509_5100} {RNA1310_11220, RNA1509_30463, RNA1509_46067, RNA1509_5100} {RNA1509_30463, RNA1509_46067, RNA1509_5100, RNA815_13978} |
| 10. | MligTC455_18947 | 624 | 13.01 | Mlig455_028731, Mlig455_061971 | Neo: - Age: - |
CWC27 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_028731 {REF} {Length: 1746} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=113.8]} {Human: ENSG00000153015, CWC27, CWC27 spliceosome associated protein homolog, [Score=239, Expect=8e-73]} {Mouse: ENSMUSG00000021715, Cwc27, CWC27 spliceosome-associated protein, [Score=211, Expect=2e-62]} {Dmel: FBgn0036207, CG10907, [Score=222, Expect=2e-66]} {Celegans: WBGene00000892, cyn-16, CYclophyliN, [Score=205, Expect=2e-60]} {Smed: dd_Smed_v6_3476_0_1, dd_Smed_v6_3476_0_1, [Score=246, Expect=4e-77]} {RNA1509_41378} {RNA1310_18103.2, RNA1509_41378} {RNA1509_41378, RNA815_18795} Mlig455_061971 {REF} {Length: 1731} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=134.8]} {Human: ENSG00000153015, CWC27, CWC27 spliceosome associated protein homolog, [RH, Score=310, Expect=9e-100]} {Mouse: ENSMUSG00000021715, Cwc27, CWC27 spliceosome-associated protein, [RH, Score=280, Expect=2e-88]} {Dmel: FBgn0036207, CG10907, [RH, Score=283, Expect=2e-89]} {Celegans: WBGene00000892, cyn-16, CYclophyliN, [RH, Score=261, Expect=4e-81]} {Smed: dd_Smed_v6_3476_0_1, dd_Smed_v6_3476_0_1, [RH, Score=296, Expect=7e-96]} {RNA1509_41378} {RNA1310_18103.2} {RNA815_18795} |
| 11. | MligTC455_33915 | 393 | 8.18 | Mlig455_009420 | Neo: - Age: Down-Up-Up |
HIST2H2AB | 0.953 | - | - | - | - | - | 0.953 | Mlig455_009420 {REF} {Length: 1772} {TRANSSPLICED} {Pfam: C-terminus of histone H2A [PF16211.7, score=71.2]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=56.4]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=25.2]} {Human: ENSG00000184270, HIST2H2AB, histone cluster 2 H2A family member b, [RH, Score=227, Expect=5e-77]; ENSG00000274997, HIST1H2AH, histone cluster 1 H2A family member h, [RH, Score=225, Expect=3e-76]; ENSG00000196787, HIST1H2AG, histone cluster 1 H2A family member g, [RH, Score=224, Expect=4e-76]; ENSG00000275221, HIST1H2AK, histone cluster 1 H2A family member k, [RH, Score=224, Expect=4e-76]; ENSG00000164508, HIST1H2AA, histone cluster 1 H2A family member a, [RH, Score=224, Expect=6e-76]; ENSG00000276368, HIST1H2AJ, histone cluster 1 H2A family member j, [RH, Score=224, Expect=4e-76]; ENSG00000278677, HIST1H2AM, histone cluster 1 H2A family member m, [RH, Score=224, Expect=4e-76]; ENSG00000276903, HIST1H2AL, histone cluster 1 H2A family member l, [RH, Score=224, Expect=4e-76]; ENSG00000196866, HIST1H2AD, histone cluster 1 H2A family member d, [RH, Score=224, Expect=9e-76]; ENSG00000188486, H2AFX, H2A histone family member X, [RH, Score=224, Expect=1e-75]; ENSG00000196747, HIST1H2AI, histone cluster 1 H2A family member i, [RH, Score=224, Expect=4e-76]; ENSG00000203812, HIST2H2AA3, histone cluster 2 H2A family member a3, [RH, Score=223, Expect=1e-75]; ENSG00000277075, HIST1H2AE, histone cluster 1 H2A family member e, [RH, Score=223, Expect=2e-75]; ENSG00000180573, HIST1H2AC, histone cluster 1 H2A family member c, [RH, Score=223, Expect=2e-75]; ENSG00000184260, HIST2H2AC, histone cluster 2 H2A family member c, [RH, Score=223, Expect=2e-75]; ENSG00000278463, HIST1H2AB, histone cluster 1 H2A family member b, [RH, Score=223, Expect=2e-75]; ENSG00000272196, HIST2H2AA4, histone cluster 2 H2A family member a4, [RH, Score=223, Expect=1e-75]; ENSG00000282988, AL031777.3, novel protein, [RH, Score=223, Expect=6e-75]; ENSG00000246705, H2AFJ, H2A histone family member J, [RH, Score=222, Expect=5e-75]; ENSG00000284841, HIST3H2A, histone cluster 3 H2A, [RH, Score=221, Expect=6e-75]; ENSG00000181218, HIST3H2A, histone cluster 3 H2A, [RH, Score=221, Expect=6e-75]} {Mouse: ENSMUSG00000063689, Hist2h2ab, histone cluster 2, H2ab, [RH, Score=226, Expect=4e-77]; ENSMUSG00000063021, Hist1h2ak, histone cluster 1, H2ak, [RH, Score=224, Expect=5e-76]; ENSMUSG00000069309, Hist1h2an, histone cluster 1, H2an, [RH, Score=223, Expect=1e-75]; ENSMUSG00000049932, H2afx, H2A histone family, member X, [RH, Score=223, Expect=2e-75]; ENSMUSG00000071478, Hist1h2ad, histone cluster 1, H2ad, [RH, Score=223, Expect=1e-75]; ENSMUSG00000094777, Hist1h2ap, histone cluster 1, H2ap, [RH, Score=223, Expect=1e-75]; ENSMUSG00000068855, Hist2h2ac, histone cluster 2, H2ac, [RH, Score=223, Expect=1e-75]; ENSMUSG00000064220, Hist2h2aa1, histone cluster 2, H2aa1, [RH, Score=223, Expect=1e-75]; ENSMUSG00000094248, Hist1h2ao, histone cluster 1, H2ao, [RH, Score=223, Expect=1e-75]; ENSMUSG00000069270, Hist1h2ac, histone cluster 1, H2ac, [RH, Score=223, Expect=1e-75]; ENSMUSG00000063954, Hist2h2aa2, histone cluster 2, H2aa2, [RH, Score=223, Expect=1e-75]; ENSMUSG00000069302, Hist1h2ah, histone cluster 1, H2ah, [RH, Score=223, Expect=8e-76]; ENSMUSG00000061615, Hist1h2ab, histone cluster 1, H2ab, [RH, Score=223, Expect=1e-75]; ENSMUSG00000071516, Hist1h2ai, histone cluster 1, H2ai, [RH, Score=223, Expect=1e-75]; ENSMUSG00000069301, Hist1h2ag, histone cluster 1, H2ag, [RH, Score=223, Expect=1e-75]; ENSMUSG00000069272, Hist1h2ae, histone cluster 1, H2ae, [RH, Score=223, Expect=1e-75]; ENSMUSG00000061991, Hist1h2af, histone cluster 1, H2af, [RH, Score=222, Expect=4e-75]; ENSMUSG00000078851, Hist3h2a, histone cluster 3, H2a, [RH, Score=221, Expect=4e-75]; ENSMUSG00000060032, H2afj, H2A histone family, member J, [RH, Score=221, Expect=7e-75]} {Dmel: FBgn0051618, His2A:CG31618, [RH, Score=206, Expect=2e-69]} {Celegans: WBGene00001921, his-47, Histone H2A, [RH, Score=201, Expect=3e-67]} {Smed: dd_Smed_v6_7383_0_1, dd_Smed_v6_7383_0_1, [RH, Score=226, Expect=5e-77]} {RNA1509_11906, RNA1509_15140, RNA1509_40639, RNA1509_48950, RNA1509_9800} {RNA1310_15984.1, RNA1509_11906, RNA1509_15140, RNA1509_40639, RNA1509_48950, RNA1509_9800} {RNA1509_11906, RNA1509_15140, RNA1509_40639, RNA1509_48950, RNA1509_9800, RNA815_19216} |
| 12. | MligTC455_40786 | 206 | 4.29 | Mlig455_037344 | Neo: - Age: - |
MID1 | 0.952 | 0.952 | - | - | - | - | - | Mlig455_037344 {REF} {Length: 4301} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=21.9} {Pfam: RING-type zinc-finger [PF13445.8, score=38.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.9]; Ring finger domain [PF13639.8, score=31.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=29.7]; zinc-RING finger domain [PF14634.8, score=26.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=22.9]} {Human: ENSG00000101871, MID1, midline 1, [Score=53.5, Expect=8e-07]; ENSG00000080561, MID2, midline 2, [Score=53.1, Expect=1e-06]; ENSG00000154447, SH3RF1, SH3 domain containing ring finger 1, [Score=52.4, Expect=2e-06]; ENSG00000121236, TRIM6, tripartite motif containing 6, [Score=51.6, Expect=2e-06]; ENSG00000258588, TRIM6-TRIM34, TRIM6-TRIM34 readthrough, [Score=51.6, Expect=3e-06]} {Mouse: ENSMUSG00000000266, Mid2, midline 2, [Score=53.1, Expect=7e-07]; ENSMUSG00000035299, Mid1, midline 1, [Score=51.6, Expect=2e-06]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=48.5, Expect=1e-05]} {Smed: dd_Smed_v6_12211_0_1, dd_Smed_v6_12211_0_1, [Score=48.1, Expect=8e-06]} {RNA1509_27662, RNA1509_38348, RNA1509_45119} {RNA1310_9832.1, RNA1509_27662, RNA1509_38348, RNA1509_45119} {RNA1509_27662, RNA1509_38348, RNA1509_45119, RNA815_14853} |
Berezikov Lab - 2020-2021 © ERIBA