TomoSeq data search

Data search

Results for MligTC455_25294

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25294

1375

28.66

Mlig455_064673

Neo: -

Age: -

Region-enriched R4: 2.070/0.03329

Regeneration-downregulated R6: -4.132

Regeneration-depleted R6: -4.132

TNN

Mlig455_064673 {REF} {Length: 1939} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=132.4]} {Human: ENSG00000120332, TNN, tenascin N, [Score=119, Expect=9e-29]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=117, Expect=2e-28]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=125, Expect=1e-30]; ENSMUSG00000026938, Fcna, ficolin A, [Score=121, Expect=5e-31]} {Dmel: FBgn0051832, CG31832, [Score=103, Expect=1e-25]} {Celegans: WBGene00020516, T15B7.1, [Score=67.0, Expect=4e-12]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=84.0, Expect=2e-17]} {RNA1509_11262} {RNA1310_19293, RNA1509_11262} {RNA1509_11262, RNA815_8978.1}

Cumulative graph for MligTC455_25294

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.284	4.966	0.31744	0.96704
RegionR2	-0.815	4.966	0.34170	0.73396
RegionR3	1.589	4.966	0.01647	0.20929
RegionR4	2.07	4.966	0.00446	0.03329
RegionR5	1.308	4.966	0.04126	0.16314
RegionR6	1.046	4.966	0.12213	0.63705
RegionR7	-0.844	4.966	0.26312	0.89162
RegionR8	-3.07	4.966	0.00325	0.09973

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.197	4.966	0.00696	0.39444
RegenerationR2	-1.947	4.966	0.02540	0.26307
RegenerationR3	-2.079	4.966	0.01790	0.24447
RegenerationR4	-2.195	4.966	0.01516	0.19268
RegenerationR5	-2.023	4.966	0.01976	0.24299
RegenerationR6	-4.132	4.966	0.00002	0.00352	Specific for R6: -4.132
RegenerationBL	-3.576	4.966	0.00106	0.02369
RegenerationTP	-1.123	4.966	0.25999	0.70737

Genes with expression patterns similar to MligTC455_25294

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25294	1375	28.66	Mlig455_064673	Neo: - Age: - Region-enriched R4: 2.070/0.03329 Regeneration-downregulated R6: -4.132 Regeneration-depleted R6: -4.132	TNN	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_064673 {REF} {Length: 1939} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=132.4]} {Human: ENSG00000120332, TNN, tenascin N, [Score=119, Expect=9e-29]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=117, Expect=2e-28]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=125, Expect=1e-30]; ENSMUSG00000026938, Fcna, ficolin A, [Score=121, Expect=5e-31]} {Dmel: FBgn0051832, CG31832, [Score=103, Expect=1e-25]} {Celegans: WBGene00020516, T15B7.1, [Score=67.0, Expect=4e-12]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=84.0, Expect=2e-17]} {RNA1509_11262} {RNA1310_19293, RNA1509_11262} {RNA1509_11262, RNA815_8978.1}
2.	MligTC455_41167	374	7.78	Mlig455_040967	Neo: - Age: Down-Up-Up, logFC(26M/2M)=3.566 Region-enriched R3: 2.641/0.00416	NCAN	0.961	-	-	-	-	-	0.961	Mlig455_040967 {REF} {Length: 1003} {Pfam: Lectin C-type domain [PF00059.23, score=32.4]} {Human: ENSG00000130287, NCAN, neurocan, [Score=67.0, Expect=4e-13]} {Mouse: ENSMUSG00000002341, Ncan, neurocan, [Score=66.2, Expect=5e-13]} {Celegans: WBGene00020585, clec-178, C-type LECtin, [Score=64.3, Expect=2e-13]} {Smed: dd_Smed_v6_1489_0_1, dd_Smed_v6_1489_0_1, [Score=56.6, Expect=4e-10]} {RNA1509_4111} {RNA1310_16505.2} {RNA815_8835}
3.	MligTC455_41591	78	1.62	Mlig455_013030	Neo: - Age: Down-Up-Down	ZDHHC2	0.957	-	-	-	-	0.957	-	Mlig455_013030 {REF} {Length: 2382} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=97.6]; N-terminal domain of galactosyltransferase [PF02709.16, score=62.9]; N-terminal region of glycosyl transferase group 7 [PF13733.8, score=27.6]} {Human: ENSG00000104219, ZDHHC2, zinc finger DHHC-type containing 2, [Score=188, Expect=7e-55]; ENSG00000102383, ZDHHC15, zinc finger DHHC-type containing 15, [Score=180, Expect=2e-52]} {Mouse: ENSMUSG00000021969, Zdhhc20, zinc finger, DHHC domain containing 20, [Score=190, Expect=7e-56]; ENSMUSG00000039470, Zdhhc2, zinc finger, DHHC domain containing 2, [Score=188, Expect=4e-55]} {Dmel: FBgn0033474, CG1407, [Score=183, Expect=1e-53]} {Celegans: WBGene00014075, dhhc-4, Zinc finger DHHC domain-containing protein 4, [Score=153, Expect=3e-42]} {Smed: dd_Smed_v6_6233_0_1, dd_Smed_v6_6233_0_1, [Score=174, Expect=5e-51]} {RNA1509_23962} {RNA1310_14192} {RNA815_5095.1}
4.	MligTC455_23093	345	7.19	Mlig455_021893	Neo: - Age: Down-Up-Up Region-enriched R3: 3.624/0.00000		0.955	-	-	-	-	-	0.955	Mlig455_021893 {REF} {Length: 1735} {RNA1509_30322, RNA1509_50391} {RNA1310_32503, RNA1509_50391} {RNA1509_50391, RNA815_39630}
5.	MligTC455_19189	4042	84.21	Mlig455_062923	Neo: - Age: - Region-enriched R3: 1.406/0.00247	BCL2L1	0.952	-	-	-	-	-	0.952	Mlig455_062923 {REF} {Length: 2734} {TRANSSPLICED} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=71.2]} {Human: ENSG00000171552, BCL2L1, BCL2 like 1, [RH, Score=74.7, Expect=7e-16]; ENSG00000129473, BCL2L2, BCL2 like 2, [RH, Score=73.6, Expect=2e-15]} {Mouse: ENSMUSG00000089682, Bcl2l2, BCL2-like 2, [RH, Score=77.0, Expect=6e-17]} {RNA1509_12307, RNA1509_12354, RNA1509_16411, RNA1509_21923, RNA1509_30230, RNA1509_30903, RNA1509_37262, RNA1509_41417, RNA1509_44623, RNA1509_5111, RNA1509_51616, RNA1509_6074} {RNA1310_29914, RNA1509_12307, RNA1509_12354, RNA1509_16411, RNA1509_21923, RNA1509_30230, RNA1509_30903, RNA1509_37262, RNA1509_41417, RNA1509_44623, RNA1509_5111, RNA1509_51616, RNA1509_6074} {RNA1509_12307, RNA1509_12354, RNA1509_16411, RNA1509_21923, RNA1509_30230, RNA1509_30903, RNA1509_37262, RNA1509_41417, RNA1509_44623, RNA1509_5111, RNA1509_51616, RNA1509_6074, RNA815_12873}

Berezikov Lab - 2020-2021 © ERIBA