TomoSeq data search

Data search

Results for MligTC455_25303

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25303

505

10.52

Mlig455_064660

Neo: -

Age: logFC(26M/2M)=1.542

Region-enriched R3: 2.475/0.02624

Regeneration-downregulated R4: -4.376

Regeneration-depleted R4: -4.376

TNN

Mlig455_064660 {REF} {Length: 1710} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=128.4]} {Human: ENSG00000120332, TNN, tenascin N, [Score=124, Expect=3e-30]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=129, Expect=3e-32]} {Dmel: FBgn0051832, CG31832, [Score=103, Expect=2e-25]} {Celegans: WBGene00020516, T15B7.1, [Score=69.3, Expect=8e-13]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=91.3, Expect=7e-20]} {RNA1509_27086, RNA1509_49160} {RNA1310_22267.1, RNA1509_27086, RNA1509_49160} {RNA1509_27086, RNA1509_49160, RNA815_8978.2}

Cumulative graph for MligTC455_25303

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.797	3.736	0.57191	1.00000
RegionR2	0.692	3.736	0.43097	0.82108
RegionR3	2.475	3.736	0.00085	0.02624
RegionR4	1.293	3.736	0.16039	0.41775
RegionR5	0.308	3.736	0.70617	1.00000
RegionR6	0.461	3.736	0.57983	1.00000
RegionR7	-1.924	3.736	0.05432	0.44881
RegionR8	-2.507	3.736	0.05876	0.47371

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-8.201	3.736	0.02608	0.60362
RegenerationR2	-3.667	3.736	0.00038	0.02630
RegenerationR3	-3.786	3.736	0.00017	0.01659
RegenerationR4	-4.376	3.736	0.00007	0.00513	Specific for R4: -4.376
RegenerationR5	-3.662	3.736	0.00059	0.04032
RegenerationR6	-3.885	3.736	0.00063	0.02650
RegenerationBL	-7.011	3.736	0.00191	0.03513
RegenerationTP	-5.969	3.736	0.00884	0.15862

Genes with expression patterns similar to MligTC455_25303

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25303	505	10.52	Mlig455_064660	Neo: - Age: logFC(26M/2M)=1.542 Region-enriched R3: 2.475/0.02624 Regeneration-downregulated R4: -4.376 Regeneration-depleted R4: -4.376	TNN	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_064660 {REF} {Length: 1710} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=128.4]} {Human: ENSG00000120332, TNN, tenascin N, [Score=124, Expect=3e-30]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=129, Expect=3e-32]} {Dmel: FBgn0051832, CG31832, [Score=103, Expect=2e-25]} {Celegans: WBGene00020516, T15B7.1, [Score=69.3, Expect=8e-13]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=91.3, Expect=7e-20]} {RNA1509_27086, RNA1509_49160} {RNA1310_22267.1, RNA1509_27086, RNA1509_49160} {RNA1509_27086, RNA1509_49160, RNA815_8978.2}
2.	MligTC455_12100	95	1.97	Mlig455_029365	Neo: - Age: Down-Up-Down Region-enriched R3: 3.875/0.00267		0.977	-	-	-	-	-	0.977	Mlig455_029365 {REF} {Length: 1265} {RNA1509_49846} {RNA1310_39189, RNA1509_49846} {RNA1509_49846, RNA815_32261}
3.	MligTC455_46285	568	11.84	Mlig455_063390	Neo: - Age: logFC(26M/2M)=0.488 Region-enriched R2: 4.933/0.00026 Region-enriched R3: 3.321/0.00307		0.971	-	-	-	-	-	0.971	Mlig455_063390 {REF} {Length: 871} {RNA1509_48573} {RNA1310_59611, RNA1509_48573} {RNA1509_48573, RNA815_35731}
4.	MligTC455_38976	212	4.41	Mlig455_032433	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.449 Region-enriched R3: 3.286/0.00058 Region-enriched R5: 2.636/0.00326	KYNU	0.966	-	-	-	-	-	0.966	Mlig455_032433 {REF} {Length: 1657} {TRANSSPLICED} {Pfam: Aminotransferase class-V [PF00266.21, score=44.9]; DegT/DnrJ/EryC1/StrS aminotransferase family [PF01041.19, score=20.8]} {Human: ENSG00000115919, KYNU, kynureninase, [RH, Score=408, Expect=7e-140]} {Mouse: ENSMUSG00000026866, Kynu, kynureninase, [RH, Score=424, Expect=2e-146]} {Celegans: WBGene00015802, kynu-1, Kynureninase, [Score=429, Expect=4e-148]} {Smed: dd_Smed_v6_4299_0_1, dd_Smed_v6_4299_0_1, [Score=417, Expect=6e-144]} {RNA1509_46160} {RNA1310_12731} {RNA815_15659}
5.	MligTC455_08195	50	1.03	Mlig455_025203, Mlig455_025657	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_025203 {REF} {Length: 1239} {TRANSSPLICED} {Pfam: SAM dependent carboxyl methyltransferase [PF03492.17, score=150.5]} {RNA1509_57863} {RNA1310_10879} {RNA815_34795} Mlig455_025657 {REF} {Length: 1898} {TRANSSPLICED} {Pfam: SAM dependent carboxyl methyltransferase [PF03492.17, score=149.1]} {RNA1509_57863} {RNA1310_10879} {RNA815_29973}
6.	MligTC455_38652	14	0.28	Mlig455_053085	Neo: - Age: logFC(26M/2M)=3.457		0.957	-	-	-	-	-	0.957	Mlig455_053085 {REF} {Length: 1326} {RNA1310_36111} {RNA815_20767}
7.	MligTC455_53427	311	6.47	Mlig455_038203	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.671 Region-enriched R3: 3.185/0.00328		0.957	-	-	-	-	-	0.957	Mlig455_038203 {REF} {Length: 2280} {Pfam: Dehydratase family [PF00920.23, score=627.7]} {RNA1509_30157} {RNA1310_12587, RNA1509_30157} {RNA1509_30157, RNA815_16048}

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