TomoSeq data search

Data search

Results for MligTC455_25305

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25305

431

8.97

Mlig455_041040

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.553

ASIC1

Mlig455_041040 {REF} {Length: 3552} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=141.4]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=68.2, Expect=3e-11]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=68.9, Expect=1e-11]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_9633_0_1, dd_Smed_v6_9633_0_1, [Score=59.3, Expect=6e-09]} {RNA1509_8154} {RNA1310_8117.1} {RNA815_3143.1}

Cumulative graph for MligTC455_25305

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.474	3.501	0.41377	1.00000
RegionR2	0.285	3.501	0.65886	0.99183
RegionR3	0.423	3.501	0.43337	0.95176
RegionR4	0.259	3.501	0.69132	0.98275
RegionR5	-0.233	3.501	0.68104	1.00000
RegionR6	0.068	3.501	0.90311	1.00000
RegionR7	0.199	3.501	0.77701	1.00000
RegionR8	0.472	3.501	0.59035	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.69	3.501	0.40647	1.00000
RegenerationR2	-0.8	3.501	0.15117	0.58525
RegenerationR3	-0.425	3.501	0.45404	0.83411
RegenerationR4	-0.407	3.501	0.49712	0.86761
RegenerationR5	0.284	3.501	0.61611	0.91678
RegenerationR6	-0.738	3.501	0.23448	0.58203
RegenerationBL	-0.693	3.501	0.33900	0.70559
RegenerationTP	-0.23	3.501	0.75015	1.00000

Genes with expression patterns similar to MligTC455_25305

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25305	431	8.97	Mlig455_041040	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.553	ASIC1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_041040 {REF} {Length: 3552} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=141.4]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=68.2, Expect=3e-11]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=68.9, Expect=1e-11]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_9633_0_1, dd_Smed_v6_9633_0_1, [Score=59.3, Expect=6e-09]} {RNA1509_8154} {RNA1310_8117.1} {RNA815_3143.1}
2.	MligTC455_25306	696	14.5	Mlig455_041143	Neo: - Age: -		3.48	0.950	-	-	0.749	0.933	0.848	Mlig455_041143 {REF} {Length: 2289} {TRANSSPLICED} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=97.2]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=53.1, Expect=2e-07]} {RNA1509_8154} {RNA1310_8117.2} {RNA815_3143.1}
3.	MligTC455_25686	80	1.67	Mlig455_044743	Neo: - Age: logFC(26M/2M)=-1.283 Region-enriched R2: 5.232/0.00864	SLC7A1	0.956	-	-	-	-	0.956	-	Mlig455_044743 {REF} {Length: 2732} {Pfam: Amino acid permease [PF13520.8, score=157.5]; Amino acid permease [PF00324.23, score=113.9]; C-terminus of AA_permease [PF13906.8, score=77.4]} {Human: ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [RH, Score=587, Expect=0.0]} {Mouse: ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [RH, Score=587, Expect=0.0]; ENSMUSG00000031596, Slc7a2, solute carrier family 7 (cationic amino acid transporter, y+ system), member 2, [RH, Score=577, Expect=0.0]; ENSMUSG00000107871, AU018091, expressed sequence AU018091, [RH, Score=564, Expect=0.0]; ENSMUSG00000054753, AU018091, expressed sequence AU018091, [RH, Score=564, Expect=0.0]} {Dmel: FBgn0037203, slif, slimfast, [RH, Score=526, Expect=1e-180]} {Celegans: WBGene00015197, B0454.6, [Score=370, Expect=2e-120]} {Smed: dd_Smed_v6_16390_0_1, dd_Smed_v6_16390_0_1, [Score=456, Expect=1e-156]} {RNA1509_41407} {RNA1310_9788.2} {RNA815_3177}
4.	MligTC455_16539	764	15.92	Mlig455_047850	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.574		0.953	-	-	-	-	0.953	-	Mlig455_047850 {REF} {Length: 1066} {RNA1509_38895} {RNA1310_54687, RNA1509_38895} {RNA1509_38895, RNA815_27874}

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