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Results for MligTC455_25309

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25309 27 0.56 Mlig455_007405

Neo: -

Age: -

 Mlig455_007405 {REF} {Length: 5652} {RNA1509_20101} {RNA1310_66411} {RNA815_42952}

Cumulative graph for MligTC455_25309

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.905 0.782 1.00000 1.00000
RegionR2 2.451 0.782 1.00000 1.00000
RegionR3 0.121 0.782 0.99964 1.00000
RegionR4 -2.203 0.782 1.00000 1.00000
RegionR5 -0.72 0.782 1.00000 1.00000
RegionR6 0.28 0.782 0.99970 1.00000
RegionR7 0.885 0.782 1.00000 1.00000
RegionR8 1.092 0.782 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.029 0.782 0.99971 1.00000
RegenerationR2 4.194 0.782 0.03697 0.31788
RegenerationR3 4.619 0.782 0.03721 0.34043
RegenerationR4 4.566 0.782 0.03001 0.27970
RegenerationR5 3.907 0.782 0.03807 0.32293
RegenerationR6 3.149 0.782 0.08312 0.36042
RegenerationBL 6.495 0.782 0.00561 0.07084
RegenerationTP 3.856 0.782 0.10360 0.49855


Genes with expression patterns similar to MligTC455_25309

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25309 27 0.56 Mlig455_007405

Neo: -

Age: -

 2 - - - - 1.000 1.000 Mlig455_007405 {REF} {Length: 5652} {RNA1509_20101} {RNA1310_66411} {RNA815_42952}
2. MligTC455_29638 106 2.21 Mlig455_018397, Mlig455_069530

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.617

 1.931 - - - - 0.951 0.980

Mlig455_018397 {REF} {Length: 5881} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=52.2]} {Celegans: WBGene00007723, C25F9.2, [Score=171, Expect=1e-43]} {RNA1509_4648} {RNA1310_3427} {RNA815_694.1}

Mlig455_069530 {REF} {Length: 5201} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=144.0]} {Celegans: WBGene00007723, C25F9.2, [Score=345, Expect=2e-99]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2}
3. MligTC455_39057 57 1.18 Mlig455_013966

Neo: Int S/G2/M

Age: -

 1.928 - - - - 0.944 0.984 Mlig455_013966 {REF} {Length: 1262} {NoTransDecoderORF} {RNA1310_104321}
4. MligTC455_19119 48 0.99 Mlig455_060984

Neo: -

Age: -

 1.909 - - - - 0.932 0.977 Mlig455_060984 {REF} {Length: 533} {NoTransDecoderORF} {RNA1509_52549}
5. MligTC455_47433 42 0.87 Mlig455_056540

Neo: -

Age: -

 1.906 - - - - 0.937 0.969 Mlig455_056540 {REF} {Length: 737} {NoTransDecoderORF} {RNA1310_65316}
6. MligTC455_46857 65 1.36 Mlig455_027226

Neo: -

Age: Down-Up-Down

 TJP2 1.899 - - - - 0.963 0.936 Mlig455_027226 {REF} {Length: 3999} {Pfam: PDZ domain [PF00595.26, score=90.1]; PDZ domain [PF17820.3, score=65.7]; Guanylate kinase [PF00625.23, score=35.9]; PDZ domain [PF13180.8, score=34.4]; ZU5 domain [PF00791.22, score=27.1]} {Human: ENSG00000119139, TJP2, tight junction protein 2, [RH, Score=184, Expect=3e-48]; ENSG00000277401, TJP1, tight junction protein 1, [RH, Score=184, Expect=5e-47]; ENSG00000104067, TJP1, tight junction protein 1, [RH, Score=184, Expect=5e-47]; ENSG00000285130, AL358113.1, tight junction protein 2, [RH, Score=182, Expect=1e-46]} {Mouse: ENSMUSG00000030516, Tjp1, tight junction protein 1, [RH, Score=185, Expect=1e-47]; ENSMUSG00000024812, Tjp2, tight junction protein 2, [RH, Score=182, Expect=1e-46]} {Dmel: FBgn0262614, pyd, polychaetoid, [Score=210, Expect=9e-56]} {Celegans: WBGene00013683, zoo-1, ZO-1 (Zonula Occludens tight junctional protein) Ortholog, [RH, Score=175, Expect=1e-44]} {Smed: dd_Smed_v6_7374_0_1, dd_Smed_v6_7374_0_1, [Score=53.1, Expect=7e-07]} {RNA1509_55128} {RNA1310_1784} {RNA815_1919}
7. MligTC455_27911 45 0.94 Mlig455_049225, Mlig455_049228

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.777

 FAT4 1.881 - - - - 0.889 0.992

Mlig455_049225 {REF} {Length: 12873} {Pfam: Cadherin domain [PF00028.19, score=824.7]; Cadherin prodomain like [PF08758.13, score=35.4]; Cadherin-like [PF16184.7, score=28.6]; Peptidase propeptide and YPEB domain [PF03413.21, score=22.0]; Bacterial cadherin-like domain [PF17803.3, score=19.8]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=310, Expect=1e-83]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=368, Expect=4e-101]} {Dmel: FBgn0001075, ft, fat, [Score=283, Expect=2e-75]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=176, Expect=4e-43]} {Smed: dd_Smed_v6_12895_0_1, dd_Smed_v6_12895_0_1, [Score=155, Expect=2e-37]} {RNA1509_562} {RNA1310_5} {RNA815_1}

Mlig455_049228 {REF} {Length: 24107} {Pfam: Cadherin domain [PF00028.19, score=1466.0]; RET Cadherin like domain 1 [PF17756.3, score=58.7]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=48.5]; Cadherin-like [PF16184.7, score=34.1]; Cadherin prodomain like [PF08758.13, score=29.5]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=396, Expect=8e-109]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=389, Expect=5e-107]} {Dmel: FBgn0001075, ft, fat, [Score=334, Expect=1e-90]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=183, Expect=5e-45]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=158, Expect=1e-37]} {RNA1509_562} {RNA1310_5} {RNA815_1}
8. MligTC455_39058 37 0.77 Mlig455_039326

Neo: -

Age: -

 1.876 - - - - 0.904 0.972 Mlig455_039326 {REF} {Length: 1252} {NoTransDecoderORF} {RNA1310_104321}
9. MligTC455_27647 22 0.46 Mlig455_018403

Neo: -

Age: -

 1.863 - - - - 0.907 0.956 Mlig455_018403 {REF} {Length: 496} {NoTransDecoderORF} {RNA1509_41197} {RNA1310_12293.2} {RNA815_20019}
10. MligTC455_00419 109 2.27 Mlig455_003934

Neo: -

Age: -

 1.858 - - - - 0.957 0.901 Mlig455_003934 {REF} {Length: 780} {NoTransDecoderORF} {RNA1509_46406} {RNA1310_72097} {RNA815_61152.1}
11. MligTC455_10699 95 1.98 Mlig455_004823, Mlig455_004902, Mlig455_040345

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.373

Region-enriched R2: 5.018/0.04137

 1.858 - - - - 0.954 0.904

Mlig455_004823 {REF} {Length: 4645} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=71.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.6]; Aspartyl protease [PF13650.8, score=26.9]; Retroviral aspartyl protease [PF00077.22, score=22.2]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=149, Expect=4e-38]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1}

Mlig455_004902 {REF} {Length: 4647} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=71.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.6]; Aspartyl protease [PF13650.8, score=26.9]; Retroviral aspartyl protease [PF00077.22, score=22.2]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=149, Expect=4e-38]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1}

Mlig455_040345 {REF} {Length: 2815} {Pfam: Gag protein p24 C-terminal domain [PF19317.1, score=19.2]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1}
12. MligTC455_14961 39 0.82 Mlig455_048867

Neo: -

Age: -

 1.846 - - - - 0.876 0.970 Mlig455_048867 {REF} {Length: 979} {NoTransDecoderORF} {RNA1310_98124}
13. MligTC455_34355 35 0.72 Mlig455_065859

Neo: -

Age: -

 1.846 - - - - 0.896 0.950 Mlig455_065859 {REF} {Length: 500} {RNA1509_53479} {RNA1310_1284} {RNA815_40112}
14. MligTC455_22962 100 2.07 Mlig455_010565

Neo: -

Age: -

 APC 1.845 - - - - 0.884 0.961 Mlig455_010565 {REF} {Length: 6539} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=23.0]} {Human: ENSG00000134982, APC, APC, WNT signaling pathway regulator, [Score=204, Expect=6e-53]; ENSG00000115266, APC2, APC2, WNT signaling pathway regulator, [Score=195, Expect=7e-52]} {Mouse: ENSMUSG00000020135, Apc2, adenomatosis polyposis coli 2, [Score=204, Expect=2e-53]; ENSMUSG00000005871, Apc, adenomatosis polyposis coli, [Score=204, Expect=2e-53]} {Dmel: FBgn0015589, Apc, APC-like, [Score=178, Expect=2e-45]} {Celegans: WBGene00000156, apr-1, Adenomatous polyposis coli protein-related protein 1, [Score=121, Expect=1e-27]} {Smed: dd_Smed_v6_6966_0_1, dd_Smed_v6_6966_0_1, [Score=179, Expect=8e-46]} {RNA1509_49785} {RNA1310_20969} {RNA815_51542}
15. MligTC455_46554 47 0.97 Mlig455_038253

Neo: -

Age: logFC(26M/2M)=-0.562

 1.835 - - - - 0.863 0.972 Mlig455_038253 {REF} {Length: 1890} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=60.6]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=94.4, Expect=7e-24]} {RNA1310_40614} {RNA815_32173}
16. MligTC455_42682 45 0.93 Mlig455_010400

Neo: -

Age: -

 1.814 - - - - 0.841 0.973 Mlig455_010400 {REF} {Length: 1751} {NoTransDecoderORF} {RNA1509_58929} {RNA1310_128448} {RNA815_10390}
17. MligTC455_34838 79 1.65 Mlig455_055037, Mlig455_055054

Neo: -

Age: logFC(26M/2M)=-0.508

 MAN1A2, MAN1C1 1.805 - - - - 0.839 0.966

Mlig455_055037 {REF} {Length: 2154} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=152.3]} {Human: ENSG00000117643, MAN1C1, mannosidase alpha class 1C member 1, [Score=97.1, Expect=8e-23]; ENSG00000177239, MAN1B1, mannosidase alpha class 1B member 1, [Score=94.7, Expect=7e-22]; ENSG00000198162, MAN1A2, mannosidase alpha class 1A member 2, [Score=94.0, Expect=3e-22]} {Mouse: ENSMUSG00000008763, Man1a2, mannosidase, alpha, class 1A, member 2, [Score=97.1, Expect=7e-23]; ENSMUSG00000037306, Man1c1, mannosidase, alpha, class 1C, member 1, [Score=95.9, Expect=2e-22]} {Dmel: FBgn0259170, alpha-Man-Ia, alpha-Mannosidase class I a, [Score=82.8, Expect=5e-18]} {Celegans: WBGene00008258, mans-2, Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5, [Score=77.0, Expect=3e-16]} {Smed: dd_Smed_v6_6801_0_1, dd_Smed_v6_6801_0_1, [Score=88.2, Expect=3e-20]} {RNA1509_49063} {RNA1310_10155.1} {RNA815_4503.1}

Mlig455_055054 {REF} {Length: 2620} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=372.1]} {Human: ENSG00000198162, MAN1A2, mannosidase alpha class 1A member 2, [Score=254, Expect=1e-76]; ENSG00000111885, MAN1A1, mannosidase alpha class 1A member 1, [Score=242, Expect=9e-72]} {Mouse: ENSMUSG00000008763, Man1a2, mannosidase, alpha, class 1A, member 2, [Score=256, Expect=2e-77]} {Dmel: FBgn0259170, alpha-Man-Ia, alpha-Mannosidase class I a, [Score=248, Expect=3e-74]} {Celegans: WBGene00008258, mans-2, Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5, [Score=239, Expect=1e-71]} {Smed: dd_Smed_v6_6801_0_1, dd_Smed_v6_6801_0_1, [Score=267, Expect=4e-82]} {RNA1509_40257, RNA1509_47963} {RNA1310_10155.1, RNA1509_47963} {RNA1509_47963, RNA815_4503.1}
18. MligTC455_50118 194 4.04 Mlig455_041659

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.843

 GIMAP4 1.797 - - - - 0.977 0.820 Mlig455_041659 {REF} {Length: 2246} {Pfam: AIG1 family [PF04548.18, score=124.8]; Hint module [PF01079.22, score=108.5]; 50S ribosome-binding GTPase [PF01926.25, score=28.0]; ABC transporter [PF00005.29, score=19.9]; Septin [PF00735.20, score=19.2]} {Human: ENSG00000133574, GIMAP4, GTPase, IMAP family member 4, [RH, Score=103, Expect=8e-24]} {Mouse: ENSMUSG00000051124, Gimap9, GTPase, IMAP family member 9, [Score=100, Expect=3e-23]} {Dmel: FBgn0004644, hh, hedgehog, [Score=58.5, Expect=7e-09]} {Celegans: WBGene00001700, grd-11, GRounDhog (Hedgehog-like family), [Score=63.9, Expect=2e-10]} {RNA1509_25973} {RNA1310_10149, RNA1509_25973} {RNA1509_25973, RNA815_5524}
19. MligTC455_48213 164 3.41 Mlig455_056285, Mlig455_056310

Neo: -

Age: -

Region-enriched R2: 5.079/0.00142

 1.788 - - - - 0.832 0.956

Mlig455_056285 {REF} {Length: 2259} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=140.9]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=85.1, Expect=2e-17]} {RNA1310_14535} {RNA815_31041}

Mlig455_056310 {REF} {Length: 1953} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=140.9]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=85.1, Expect=2e-17]} {RNA1310_14535} {RNA815_31041}
20. MligTC455_42890 236 4.91 Mlig455_022504

Neo: -

Age: logFC(26M/2M)=-0.269

Region-enriched R4: 2.592/0.03886

 NOTCH1 1.777 - - - - 0.821 0.956 Mlig455_022504 {REF} {Length: 3820} {Pfam: Calcium-binding EGF domain [PF07645.17, score=77.2]; EGF-like domain [PF00008.29, score=65.8]; Delta serrate ligand [PF01414.21, score=41.8]; Human growth factor-like EGF [PF12661.9, score=38.5]; EGF-like domain [PF07974.15, score=26.9]; EGF domain [PF12947.9, score=23.0]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=134, Expect=6e-32]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=132, Expect=2e-31]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=130, Expect=5e-31]; ENSMUSG00000014773, Dll1, delta like canonical Notch ligand 1, [Score=129, Expect=6e-31]; ENSMUSG00000036766, Dner, delta/notch-like EGF repeat containing, [Score=127, Expect=3e-30]; ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=126, Expect=1e-29]; ENSMUSG00000027878, Notch2, notch 2, [Score=125, Expect=3e-29]} {Dmel: FBgn0004647, N, Notch, [Score=134, Expect=3e-32]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=119, Expect=2e-27]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=119, Expect=7e-28]} {RNA1509_36279} {RNA1310_12661} {RNA815_3995.1}
21. MligTC455_30255 132 2.75 Mlig455_011743

Neo: Int S/G2/M

Age: -

Region-enriched R4: 3.728/0.02036

 1.775 - - - - 0.791 0.984 Mlig455_011743 {REF} {Length: 945} {TRANSSPLICED} {RNA1509_16349} {RNA1310_2575} {RNA815_54759}
22. MligTC455_08216 34 0.7 Mlig455_009138

Neo: -

Age: -

 1.761 - - - - 0.787 0.974 Mlig455_009138 {REF} {Length: 379} {NoTransDecoderORF} {RNA1310_66482.1} {RNA815_62564}
23. MligTC455_24621 43 0.9 Mlig455_034366

Neo: -

Age: -

 1.75 - - - - 0.776 0.974 Mlig455_034366 {REF} {Length: 575} {NoTransDecoderORF}
24. MligTC455_38019 32 0.66 Mlig455_052061

Neo: -

Age: -

 1.748 - - - - 0.770 0.978 Mlig455_052061 {REF} {Length: 1614} {NoTransDecoderORF} {RNA1509_22316} {RNA1310_86084} {RNA815_47119}
25. MligTC455_56420 35 0.72 Mlig455_064962

Neo: -

Age: -

 1.733 - - - - 0.950 0.783 Mlig455_064962 {REF} {Length: 368} {RNA1509_38728} {RNA1310_9789} {RNA815_21216}
26. MligTC455_28182 212 4.43 Mlig455_030757, Mlig455_060379, Mlig455_066025

Neo: -

Age: -

 1.723 - - - - 0.748 0.975

Mlig455_030757 {REF} {Length: 166} {NoTransDecoderORF} {RNA1310_4439.2} {RNA815_12729}

Mlig455_060379 {REF} {Length: 251} {NoTransDecoderORF} {RNA1310_4439.2} {RNA815_12729}

Mlig455_066025 {REF} {Length: 1610} {NoTransDecoderORF} {RNA1509_44500} {RNA1310_4439.1} {RNA815_1450.1}
27. MligTC455_34287 140 2.92 Mlig455_024072, Mlig455_057007

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.265

 1.716 - - - - 0.975 0.741

Mlig455_024072 {REF} {Length: 3008} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=33.9]; hAT family C-terminal dimerisation region [PF05699.16, score=30.6]} {Smed: dd_Smed_v6_17002_0_4, dd_Smed_v6_17002_0_4, [RH, Score=103, Expect=6e-23]} {RNA1509_53951} {RNA1310_1981} {RNA815_2490}

Mlig455_057007 {REF} {Length: 1157} {TRANSSPLICED} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=32.2]; PKC-activated protein phosphatase-1 inhibitor [PF05361.14, score=30.1]} {Dmel: FBgn0032297, CG17124, [Score=77.0, Expect=3e-17]} {Smed: dd_Smed_v6_6245_0_1, dd_Smed_v6_6245_0_1, [Score=66.6, Expect=1e-13]} {RNA1509_53951} {RNA1310_1981} {RNA815_2490}
28. MligTC455_06741 156 3.25 Mlig455_001405, Mlig455_056658, Mlig455_064262, Mlig455_070036

Neo: -

Age: -

 1.711 - - - - 0.760 0.951

Mlig455_001405 {REF} {Length: 203} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_55741} {RNA1310_25713} {RNA815_19630.1}

Mlig455_056658 {REF} {Length: 355} {NoTransDecoderORF} {RNA1509_55741} {RNA1310_25713} {RNA815_19630.1}

Mlig455_064262 {REF} {Length: 202} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_55741} {RNA1310_25713} {RNA815_19630.1}

Mlig455_070036 {REF} {Length: 244} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_55741} {RNA1310_25713} {RNA815_19630.1}
29. MligTC455_39810 156 3.25 Mlig455_039453

Neo: -

Age: -

 1.709 - - - - 0.742 0.967 Mlig455_039453 {REF} {Length: 3274} {RNA1509_51368, RNA1509_56186, RNA1509_6550} {RNA1310_21584, RNA1509_51368, RNA1509_56186} {RNA1509_51368, RNA1509_56186, RNA815_10065}
30. MligTC455_25567 31 0.65 Mlig455_003495, Mlig455_015560, Mlig455_037973

Neo: -

Age: -

 GLRA4 1.708 - - - - 0.718 0.990

Mlig455_003495 {REF} {Length: 2067} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=35.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=19.1]} {Human: ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=58.9, Expect=7e-09]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=58.2, Expect=1e-08]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=58.2, Expect=1e-08]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=57.4, Expect=2e-08]} {Dmel: FBgn0003011, ort, ora transientless, [Score=55.8, Expect=4e-08]} {Celegans: WBGene00015412, lgc-9, Ligand-Gated ion Channel, [Score=62.8, Expect=2e-10]} {Smed: dd_Smed_v6_14925_0_1, dd_Smed_v6_14925_0_1, [RH, Score=609, Expect=0.0]} {RNA1310_35073.1} {RNA815_40431}

Mlig455_015560 {REF} {Length: 1799} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=35.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=19.1]} {Human: ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=58.9, Expect=7e-09]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=58.2, Expect=1e-08]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=58.2, Expect=1e-08]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=57.4, Expect=2e-08]} {Dmel: FBgn0003011, ort, ora transientless, [Score=55.8, Expect=4e-08]} {Celegans: WBGene00015412, lgc-9, Ligand-Gated ion Channel, [Score=62.8, Expect=2e-10]} {Smed: dd_Smed_v6_14925_0_1, dd_Smed_v6_14925_0_1, [RH, Score=609, Expect=0.0]} {RNA1310_35073.1} {RNA815_40431}

Mlig455_037973 {REF} {Length: 1670} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=35.7]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=20.4]} {Human: ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=58.5, Expect=7e-09]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=57.4, Expect=2e-08]} {Mouse: ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=57.4, Expect=1e-08]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=57.4, Expect=1e-08]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=54.7, Expect=1e-07]} {Dmel: FBgn0003011, ort, ora transientless, [Score=55.5, Expect=4e-08]} {Celegans: WBGene00015412, lgc-9, Ligand-Gated ion Channel, [Score=62.8, Expect=2e-10]} {Smed: dd_Smed_v6_14925_0_2, dd_Smed_v6_14925_0_2, [Score=554, Expect=0.0]} {RNA1310_35073.2} {RNA815_40431}
31. MligTC455_20370 41 0.85 Mlig455_046379

Neo: -

Age: Down-Up-Down

 1.675 - - - - 0.952 0.723 Mlig455_046379 {REF} {Length: 1870} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=27.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=23.6]; Retroviral aspartyl protease [PF00077.22, score=19.6]; Family of unknown function (DUF5537) [PF17690.3, score=19.3]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=76.3, Expect=3e-14]} {RNA1509_51609} {RNA1310_24791} {RNA815_28268}
32. MligTC455_11211 64 1.33 Mlig455_014750

Neo: -

Age: -

 1.67 - - - - 0.709 0.961 Mlig455_014750 {REF} {Length: 809} {NoTransDecoderORF} {RNA1509_24925, RNA1509_33762} {RNA1310_64582, RNA1509_33762} {RNA1509_33762, RNA815_39421}
33. MligTC455_26392 64 1.33 Mlig455_001758

Neo: -

Age: -

Region-enriched R4: 4.334/0.04740

 PLD1 1.656 - - - - 0.955 0.701 Mlig455_001758 {REF} {Length: 4484} {Pfam: PLD-like domain [PF13091.8, score=36.1]; Phospholipase D Active site motif [PF00614.24, score=31.9]} {Human: ENSG00000075651, PLD1, phospholipase D1, [RH, Score=290, Expect=1e-86]} {Mouse: ENSMUSG00000027695, Pld1, phospholipase D1, [RH, Score=296, Expect=7e-89]} {Dmel: FBgn0033075, Pld, Phospholipase D, [RH, Score=241, Expect=1e-68]} {Celegans: WBGene00004040, pld-1, PhosphoLipase D; Phospholipase D, [RH, Score=248, Expect=9e-71]} {Smed: dd_Smed_v6_61149_0_1, dd_Smed_v6_61149_0_1, [RH, Score=247, Expect=2e-76]} {RNA1509_57028} {RNA1310_1982, RNA1509_57028} {RNA1509_57028, RNA815_17806}
34. MligTC455_01195 22 0.47 Mlig455_036133

Neo: -

Age: -

 0.992 - - - - - 0.992 Mlig455_036133 {REF} {Length: 295} {NoTransDecoderORF} {RNA1509_56822} {RNA1310_22534} {RNA815_1171.1}
35. MligTC455_34767 88 1.84 Mlig455_013226

Neo: -

Age: Down-Up-Up

 0.992 - - - - - 0.992 Mlig455_013226 {REF} {Length: 3680} {Pfam: CorA-like Mg2+ transporter protein [PF01544.20, score=24.5]} {RNA1310_21417.1} {RNA815_8144.1}
36. MligTC455_51246 58 1.2 Mlig455_014016

Neo: -

Age: -

 0.991 - - - - - 0.991 Mlig455_014016 {REF} {Length: 2834} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_22299} {RNA815_15623}
37. MligTC455_09107 11 0.24 Mlig455_059945

Neo: -

Age: -

 0.99 - - - - 0.990 - Mlig455_059945 {REF} {Length: 465} {NoTransDecoderORF} {RNA1509_58333} {RNA1310_141885} {RNA815_39121}
38. MligTC455_34066 149 3.1 Mlig455_069292

Neo: -

Age: -

 0.99 - - - - - 0.990 Mlig455_069292 {REF} {Length: 832} {NoTransDecoderORF} {RNA1509_20753} {RNA1310_16791} {RNA815_12674.1}
39. MligTC455_27846 65 1.35 Mlig455_062268

Neo: -

Age: -

 0.988 - - - - - 0.988 Mlig455_062268 {REF} {Length: 6610} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=113.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.6]; Integrase zinc binding domain [PF17921.3, score=71.0]; Integrase core domain [PF00665.28, score=47.5]; Aspartyl protease [PF13650.8, score=38.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.5]; Retroviral aspartyl protease [PF00077.22, score=26.8]; Aspartyl protease [PF09668.12, score=22.8]; Putative peptidase (DUF1758) [PF05585.14, score=21.8]; Retroviral aspartyl protease [PF08284.13, score=18.9]; DDE superfamily endonuclease [PF13358.8, score=18.6]} {Smed: dd_Smed_v6_1574_6_41, dd_Smed_v6_1574_6_41, [Score=335, Expect=6e-100]} {RNA1509_20493} {RNA1310_131.1} {RNA815_52.1}
40. MligTC455_30472 28 0.59 Mlig455_071147

Neo: -

Age: -

Regeneration-enriched R3: 8.115
Regeneration-enriched R4: 7.676
Regeneration-enriched R5: 6.853
Regeneration-enriched R2: 6.169

 0.988 - - - - 0.988 - Mlig455_071147 {REF} {Length: 3552} {NoTransDecoderORF} {RNA1509_28752} {RNA1310_23997.1} {RNA815_18824.1}
41. MligTC455_14677 21 0.44 Mlig455_004558, Mlig455_064752

Neo: -

Age: -

 TRPM2 0.987 - - - - - 0.987

Mlig455_004558 {REF} {Length: 1754} {Pfam: SLOG in TRPM [PF18139.3, score=98.9]; Ankyrin repeats (3 copies) [PF12796.9, score=36.5]; Ankyrin repeat [PF13606.8, score=23.8]; Ankyrin repeat [PF00023.32, score=22.8]; Ankyrin repeats (many copies) [PF13857.8, score=20.3]; Ankyrin repeats (many copies) [PF13637.8, score=20.1]} {Human: ENSG00000142185, TRPM2, transient receptor potential cation channel subfamily M member 2, [Score=134, Expect=1e-32]} {Mouse: ENSMUSG00000009292, Trpm2, transient receptor potential cation channel, subfamily M, member 2, [Score=126, Expect=4e-30]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=82.0, Expect=5e-16]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=96.3, Expect=1e-20]} {Smed: dd_Smed_v6_17981_0_3, dd_Smed_v6_17981_0_3, [Score=157, Expect=3e-41]} {RNA1310_103417}

Mlig455_064752 {REF} {Length: 2527} {Pfam: SLOG in TRPM [PF18139.3, score=98.9]; Ankyrin repeats (3 copies) [PF12796.9, score=37.5]; Ankyrin repeat [PF13606.8, score=26.1]; Ankyrin repeats (many copies) [PF13637.8, score=25.3]; Ankyrin repeats (many copies) [PF13857.8, score=24.8]; Ankyrin repeat [PF00023.32, score=23.9]} {Human: ENSG00000142185, TRPM2, transient receptor potential cation channel subfamily M member 2, [Score=135, Expect=5e-33]} {Mouse: ENSMUSG00000009292, Trpm2, transient receptor potential cation channel, subfamily M, member 2, [Score=128, Expect=1e-30]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=82.4, Expect=5e-16]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=96.3, Expect=2e-20]} {Smed: dd_Smed_v6_17981_0_3, dd_Smed_v6_17981_0_3, [Score=157, Expect=4e-41]} {RNA1509_36146} {RNA1310_103417} {RNA815_131.5}
42. MligTC455_30270 406 8.46 Mlig455_012719, Mlig455_044289

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 4.823

Regeneration-enriched BL: 4.823

 0.987 - - - - - 0.987

Mlig455_012719 {REF} {Length: 392} {RNA1509_16349} {RNA1310_2575}

Mlig455_044289 {REF} {Length: 4784} {RNA1509_16349} {RNA1310_2575} {RNA815_3500.1}
43. MligTC455_54026 99 2.07 Mlig455_025843, Mlig455_025903

Neo: -

Age: -

 0.987 - - - - - 0.987

Mlig455_025843 {REF} {Length: 2505} {TRANSSPLICED} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=91.5]; HSP20-like domain found in ArsA [PF17886.3, score=30.3]} {Dmel: FBgn0001225, Hsp26, Heat shock protein 26, [RH, Score=57.8, Expect=8e-10]} {Celegans: WBGene00008592, F08H9.4, [RH, Score=60.5, Expect=2e-11]} {Smed: dd_Smed_v6_1039_0_1, dd_Smed_v6_1039_0_1, [RH, Score=101, Expect=2e-25]} {RNA1509_26837} {RNA1310_48105} {RNA815_21766}

Mlig455_025903 {REF} {Length: 2459} {TRANSSPLICED} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=91.5]; HSP20-like domain found in ArsA [PF17886.3, score=30.3]} {Dmel: FBgn0001225, Hsp26, Heat shock protein 26, [RH, Score=57.8, Expect=8e-10]} {Celegans: WBGene00008592, F08H9.4, [RH, Score=60.8, Expect=2e-11]} {Smed: dd_Smed_v6_1039_0_1, dd_Smed_v6_1039_0_1, [RH, Score=101, Expect=2e-25]} {RNA1509_33990} {RNA1310_42388.1} {RNA815_21766}
44. MligTC455_09724 48 1.01 Mlig455_009261

Neo: -

Age: -

 0.985 - - - - - 0.985 Mlig455_009261 {REF} {Length: 1012} {NoTransDecoderORF}
45. MligTC455_10785 347 7.24 Mlig455_030825

Neo: -

Age: -

 0.985 - - - - - 0.985 Mlig455_030825 {REF} {Length: 570} {Pfam: Essential protein Yae1, N terminal [PF09811.11, score=77.3]}
46. MligTC455_49818 37 0.78 Mlig455_007221, Mlig455_007455

Neo: -

Age: -

 0.985 - - - - - 0.985

Mlig455_007221 {REF} {Length: 2050} {RNA1310_53527} {RNA815_61088}

Mlig455_007455 {REF} {Length: 3769} {Mouse: ENSMUSG00000054999, Naaladl1, N-acetylated alpha-linked acidic dipeptidase-like 1, [Score=56.6, Expect=8e-08]} {RNA1310_53527} {RNA815_58531}
47. MligTC455_06578 32 0.67 Mlig455_026520, Mlig455_026620

Neo: -

Age: -

 0.984 - - - - - 0.984

Mlig455_026520 {REF} {Length: 631} {NoTransDecoderORF}

Mlig455_026620 {REF} {Length: 2186} {RNA1509_4420} {RNA1310_2560} {RNA815_2113.1}
48. MligTC455_06721 89 1.85 Mlig455_017345, Mlig455_043539

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.604

 EBF1, EBF3 0.984 - - - - - 0.984

Mlig455_017345 {REF} {Length: 1749} {Pfam: Transcription factor COE1 DNA-binding domain [PF16422.7, score=116.1]; Transcription factor COE1 helix-loop-helix domain [PF16423.7, score=102.1]; IPT/TIG domain [PF01833.26, score=49.8]; Spt20 family [PF12090.10, score=20.8]; Subtilase family [PF00082.24, score=20.7]} {Human: ENSG00000164330, EBF1, early B cell factor 1, [RH, Score=362, Expect=1e-122]} {Mouse: ENSMUSG00000057098, Ebf1, early B cell factor 1, [Score=364, Expect=3e-121]; ENSMUSG00000010476, Ebf3, early B cell factor 3, [Score=363, Expect=6e-121]; ENSMUSG00000022053, Ebf2, early B cell factor 2, [Score=352, Expect=9e-117]} {Dmel: FBgn0001319, kn, knot, [Score=371, Expect=2e-124]} {Celegans: WBGene00006743, unc-3, Transcription factor unc-3, [Score=288, Expect=6e-93]} {Smed: dd_Smed_v6_9893_0_1, dd_Smed_v6_9893_0_1, [Score=355, Expect=3e-118]} {RNA1310_57873} {RNA815_52006}

Mlig455_043539 {REF} {Length: 2526} {Pfam: Transcription factor COE1 DNA-binding domain [PF16422.7, score=417.7]; Transcription factor COE1 helix-loop-helix domain [PF16423.7, score=101.4]; IPT/TIG domain [PF01833.26, score=49.0]; Spt20 family [PF12090.10, score=20.1]; Subtilase family [PF00082.24, score=20.0]} {Human: ENSG00000108001, EBF3, early B cell factor 3, [RH, Score=619, Expect=0.0]; ENSG00000164330, EBF1, early B cell factor 1, [RH, Score=619, Expect=0.0]; ENSG00000221818, EBF2, early B cell factor 2, [RH, Score=595, Expect=0.0]} {Mouse: ENSMUSG00000057098, Ebf1, early B cell factor 1, [RH, Score=621, Expect=0.0]; ENSMUSG00000010476, Ebf3, early B cell factor 3, [RH, Score=620, Expect=0.0]; ENSMUSG00000022053, Ebf2, early B cell factor 2, [RH, Score=595, Expect=0.0]; ENSMUSG00000053552, Ebf4, early B cell factor 4, [RH, Score=593, Expect=0.0]} {Dmel: FBgn0001319, kn, knot, [RH, Score=617, Expect=0.0]} {Celegans: WBGene00006743, unc-3, Transcription factor unc-3, [RH, Score=513, Expect=1e-178]} {Smed: dd_Smed_v6_9893_0_1, dd_Smed_v6_9893_0_1, [RH, Score=588, Expect=0.0]} {RNA1310_57873} {RNA815_35851}
49. MligTC455_13733 48 1.01 Mlig455_060487

Neo: -

Age: -

 0.984 - - - - - 0.984 Mlig455_060487 {REF} {Length: 1932} {RNA1310_31419} {RNA815_30794}
50. MligTC455_29145 72 1.51 Mlig455_014865

Neo: -

Age: -

 0.984 - - - - - 0.984 Mlig455_014865 {REF} {Length: 3483} {RNA1509_13072} {RNA1310_989.1} {RNA815_1327.1}
51. MligTC455_56264 21 0.44 Mlig455_057708

Neo: -

Age: -

 0.984 - - - - - 0.984 Mlig455_057708 {REF} {Length: 755} {RNA1509_18097} {RNA1310_18939} {RNA815_5467.1}
52. MligTC455_10259 124 2.58 Mlig455_052843

Neo: Int S/G2/M

Age: -

 0.983 - - - - - 0.983 Mlig455_052843 {REF} {Length: 1170} {RNA1310_32241.1} {RNA815_32339}
53. MligTC455_28408 47 0.98 Mlig455_055493

Neo: -

Age: -

 0.983 - - - - - 0.983 Mlig455_055493 {REF} {Length: 5141} {RNA1509_42084} {RNA1310_16069} {RNA815_21447}
54. MligTC455_01456 250 5.2 Mlig455_019058, Mlig455_064312, Mlig455_064345

Neo: -

Age: -

 PCSK5 0.982 - - - - - 0.982

Mlig455_019058 {REF} {Length: 290} {Human: ENSG00000099139, PCSK5, proprotein convertase subtilisin/kexin type 5, [Score=43.5, Expect=2e-06]}

Mlig455_064312 {REF} {Length: 641}

Mlig455_064345 {REF} {Length: 860} {Human: ENSG00000099139, PCSK5, proprotein convertase subtilisin/kexin type 5, [Score=48.5, Expect=3e-08]}
55. MligTC455_09784 208 4.33 Mlig455_040642

Neo: -

Age: -

 0.982 - - - - - 0.982 Mlig455_040642 {REF} {Length: 758} {NoTransDecoderORF}
56. MligTC455_57556 12 0.25 Mlig455_015090

Neo: -

Age: -

 0.982 - - - - - 0.982 Mlig455_015090 {REF} {Length: 191} {NoTransDecoderORF}
57. MligTC455_09448 18 0.38 Mlig455_060229

Neo: -

Age: -

Regeneration-upregulated R2: 5.386

Regeneration-enriched R2: 5.386

 0.981 - - - - 0.981 - Mlig455_060229 {REF} {Length: 994} {NoTransDecoderORF} {RNA1310_62102}
58. MligTC455_11316 16 0.32 Mlig455_015383

Neo: -

Age: -

 0.981 - - - - - 0.981 Mlig455_015383 {REF} {Length: 775} {TRANSSPLICED} {RNA1509_14043} {RNA1310_81640} {RNA815_13324.1}
59. MligTC455_20573 63 1.31 Mlig455_058491

Neo: Int S/G2/M

Age: -

 ATP6V1FNB 0.981 - - - - - 0.981 Mlig455_058491 {REF} {Length: 3487} {Pfam: FAM183A and FAM183B related [PF14886.8, score=22.5]} {Human: ENSG00000272899, ATP6V1FNB, ATP6V1F neighbor, [RH, Score=65.1, Expect=4e-12]} {Mouse: ENSMUSG00000109649, Gm45521, predicted gene 45521, [RH, Score=91.7, Expect=1e-21]} {Smed: dd_Smed_v6_3203_0_1, dd_Smed_v6_3203_0_1, [Score=132, Expect=2e-37]} {RNA1509_40833} {RNA1310_10710.1} {RNA815_4442.1}
60. MligTC455_43912 108 2.26 Mlig455_038979

Neo: -

Age: -

Region-enriched R8: 3.794/0.00970

 SNAI2 0.981 - - - - - 0.981 Mlig455_038979 {REF} {Length: 2442} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=89.3]; C2H2-type zinc finger [PF13894.8, score=57.9]; Zinc-finger double domain [PF13465.8, score=53.2]; Zinc-finger of C2H2 type [PF12874.9, score=40.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=40.0]; C2H2-type zinc finger [PF13912.8, score=35.8]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=24.6]; Zinc ribbon domain [PF09723.12, score=19.4]} {Human: ENSG00000019549, SNAI2, snail family transcriptional repressor 2, [RH, Score=204, Expect=3e-62]} {Mouse: ENSMUSG00000022676, Snai2, snail family zinc finger 2, [RH, Score=202, Expect=6e-62]} {Dmel: FBgn0001983, wor, worniu, [RH, Score=207, Expect=7e-61]} {Celegans: WBGene00019299, snai-1, SNAIl family zinc finger 2 transcription factor homolog, [Score=152, Expect=9e-44]} {Smed: dd_Smed_v6_10216_0_1, dd_Smed_v6_10216_0_1, [RH, Score=204, Expect=3e-62]} {RNA1509_43471} {RNA1310_64158} {RNA815_60731}
61. MligTC455_57082 21 0.44 Mlig455_041284

Neo: -

Age: -

 0.981 - - - - - 0.981 Mlig455_041284 {REF} {Length: 307} {NoTransDecoderORF} {RNA1310_83793}
62. MligTC455_28586 32 0.66 Mlig455_032084

Neo: -

Age: Up-Down-Down

 0.98 - - - - - 0.980 Mlig455_032084 {REF} {Length: 7595} {RNA1509_42521, RNA1509_44223, RNA1509_46209} {RNA1310_31499, RNA1509_42521, RNA1509_46209} {RNA1509_42521, RNA1509_46209, RNA815_19070}
63. MligTC455_40913 85 1.77 Mlig455_067935

Neo: -

Age: -

Regeneration-upregulated BL: 9.167

Regeneration-enriched BL: 9.167

 ASCL5 0.98 - - - - - 0.980 Mlig455_067935 {REF} {Length: 1417} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=44.2]} {Human: ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [Score=48.1, Expect=4e-06]; ENSG00000176009, ASCL3, achaete-scute family bHLH transcription factor 3, [Score=47.0, Expect=7e-06]} {Mouse: ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [Score=48.5, Expect=2e-06]} {Dmel: FBgn0004170, sc, scute, [Score=55.1, Expect=2e-08]} {Celegans: WBGene00001950, hlh-3, Helix-loop-helix protein 3, [Score=47.0, Expect=3e-06]}
64. MligTC455_09509 46 0.95 Mlig455_042043

Neo: -

Age: -

 0.979 - - - - - 0.979 Mlig455_042043 {REF} {Length: 1543} {Pfam: SICA C-terminal inner membrane domain [PF12879.9, score=63.2]} {RNA1509_50446} {RNA1310_8738.1} {RNA815_21682.1}
65. MligTC455_16142 67 1.41 Mlig455_028937

Neo: -

Age: -

 0.979 - - - - - 0.979 Mlig455_028937 {REF} {Length: 2115} {NoTransDecoderORF} {RNA1509_53775} {RNA1310_26215.1, RNA1509_53775} {RNA1509_53775, RNA815_54266}
66. MligTC455_29365 117 2.43 Mlig455_056795

Neo: -

Age: Up-Down-Down

 0.979 - - - - - 0.979 Mlig455_056795 {REF} {Length: 1826} {RNA1509_16318} {RNA1310_36885.1} {RNA815_17277}
67. MligTC455_32436 43 0.91 Mlig455_025074

Neo: -

Age: -

 0.978 - - - - - 0.978 Mlig455_025074 {REF} {Length: 2851} {RNA1509_1845} {RNA1310_50.1} {RNA815_5933}
68. MligTC455_39414 72 1.49 Mlig455_064821

Neo: -

Age: -

 ASCL5 0.978 - - - - - 0.978 Mlig455_064821 {REF} {Length: 1266} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=58.6]} {Human: ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [Score=67.0, Expect=2e-13]} {Mouse: ENSMUSG00000035951, Ascl3, achaete-scute family bHLH transcription factor 3, [Score=63.5, Expect=2e-12]; ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [Score=62.4, Expect=5e-12]} {Dmel: FBgn0000022, ac, achaete, [Score=60.1, Expect=4e-11]} {Celegans: WBGene00001952, hlh-6, Helix-loop-helix protein 6, [Score=63.9, Expect=3e-12]} {Smed: dd_Smed_v6_9906_0_1, dd_Smed_v6_9906_0_1, [Score=57.4, Expect=1e-10]} {RNA1310_63113} {RNA815_46311}
69. MligTC455_04154 8 0.16 Mlig455_065272

Neo: -

Age: -

 0.977 - - - - 0.977 - Mlig455_065272 {REF} {Length: 2413} {RNA1509_33387} {RNA1310_38614} {RNA815_2054.1}
70. MligTC455_20908 268 5.58 Mlig455_000262

Neo: -

Age: Up-Down-Down

 NALCN 0.977 - - - - - 0.977 Mlig455_000262 {REF} {Length: 6526} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=369.8]; Polycystin cation channel [PF08016.14, score=20.1]} {Human: ENSG00000102452, NALCN, sodium leak channel, non-selective, [Score=1434, Expect=0.0]} {Mouse: ENSMUSG00000000197, Nalcn, sodium leak channel, non-selective, [Score=1439, Expect=0.0]} {Dmel: FBgn0002917, na, narrow abdomen, [Score=1431, Expect=0.0]} {Celegans: WBGene00006809, unc-77, Four domain-type voltage-gated ion channel alpha-1 subunit, [Score=1234, Expect=0.0]} {Smed: dd_Smed_v6_7314_0_1, dd_Smed_v6_7314_0_1, [Score=1574, Expect=0.0]} {RNA1509_7317} {RNA1310_530.1} {RNA815_339.1}
71. MligTC455_28130 73 1.52 Mlig455_017884

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_017884 {REF} {Length: 3157} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
72. MligTC455_44421 36 0.74 Mlig455_016824

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_016824 {REF} {Length: 717} {NoTransDecoderORF} {RNA1310_130476}
73. MligTC455_23808 31 0.65 Mlig455_059306

Neo: -

Age: Down-Down-Up

 0.976 - - - - - 0.976 Mlig455_059306 {REF} {Length: 1845} {Pfam: Pacifastin inhibitor (LCMII) [PF05375.15, score=30.7]} {RNA1509_46843} {RNA1310_11232} {RNA815_41042}
74. MligTC455_24036 38 0.8 Mlig455_033348

Neo: -

Age: -

 0.976 - - - - 0.976 - Mlig455_033348 {REF} {Length: 1827} {TRANSSPLICED} {Pfam: PAXIP1-associated-protein-1 C term PTIP binding protein [PF15364.8, score=19.1]} {RNA1509_59545} {RNA1310_63661} {RNA815_38848.2}
75. MligTC455_24711 46 0.96 Mlig455_015705

Neo: -

Age: -

Regeneration-upregulated BL: 6.967

Regeneration-enriched BL: 6.967

 0.976 - - - - - 0.976 Mlig455_015705 {REF} {Length: 1380} {NoTransDecoderORF} {RNA1509_40708} {RNA1310_77515} {RNA815_26884}
76. MligTC455_28662 92 1.92 Mlig455_043197

Neo: -

Age: logFC(26M/2M)=-1.132

 0.976 - - - - - 0.976 Mlig455_043197 {REF} {Length: 411} {RNA1509_1353} {RNA1310_73021.2} {RNA815_26455.1}
77. MligTC455_29241 6 0.13 Mlig455_002458, Mlig455_002703

Neo: -

Age: -

 TUBGCP3 0.976 - - - - 0.976 -

Mlig455_002458 {REF} {Length: 2568} {TRANSSPLICED} {Pfam: Gamma tubulin complex component N-terminal [PF17681.3, score=266.8]; Gamma tubulin complex component C-terminal [PF04130.15, score=228.0]} {Human: ENSG00000126216, TUBGCP3, tubulin gamma complex associated protein 3, [RH, Score=562, Expect=0.0]} {Mouse: ENSMUSG00000000759, Tubgcp3, tubulin, gamma complex associated protein 3, [Score=566, Expect=0.0]} {Dmel: FBgn0001612, Grip91, Gamma-tubulin ring protein 91, [Score=340, Expect=5e-103]} {Smed: dd_Smed_v6_9688_0_1, dd_Smed_v6_9688_0_1, [Score=380, Expect=3e-119]} {RNA1509_5764} {RNA1310_394.3} {RNA815_906}

Mlig455_002703 {REF} {Length: 2537} {TRANSSPLICED} {Pfam: Gamma tubulin complex component N-terminal [PF17681.3, score=266.8]; Gamma tubulin complex component C-terminal [PF04130.15, score=227.6]} {Human: ENSG00000126216, TUBGCP3, tubulin gamma complex associated protein 3, [RH, Score=562, Expect=0.0]} {Mouse: ENSMUSG00000000759, Tubgcp3, tubulin, gamma complex associated protein 3, [Score=565, Expect=0.0]} {Dmel: FBgn0001612, Grip91, Gamma-tubulin ring protein 91, [Score=337, Expect=3e-102]} {Smed: dd_Smed_v6_9688_0_1, dd_Smed_v6_9688_0_1, [Score=378, Expect=2e-118]} {RNA1509_5764} {RNA1310_394.3} {RNA815_906}
78. MligTC455_06332 14 0.28 Mlig455_057922

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_057922 {REF} {Length: 345} {NoTransDecoderORF} {RNA1310_58645} {RNA815_60376}
79. MligTC455_11171 38 0.79 Mlig455_032767

Neo: -

Age: -

 0.975 - - - - - 0.975 Mlig455_032767 {REF} {Length: 428} {TRANSSPLICED}
80. MligTC455_31187 157 3.27 Mlig455_003285, Mlig455_030234

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.829

 FAM57A 0.975 - - - - 0.975 -

Mlig455_003285 {REF} {Length: 5647} {TRANSSPLICED} {tRNA: Lys(TTT), score=88.9} {Pfam: TLC domain [PF03798.18, score=91.3]} {Human: ENSG00000167695, FAM57A, family with sequence similarity 57 member A, [Score=100, Expect=8e-25]} {Mouse: ENSMUSG00000069808, Fam57a, family with sequence similarity 57, member A, [Score=114, Expect=4e-30]} {RNA1509_29800} {RNA1310_23795.1} {RNA815_13618.1}

Mlig455_030234 {REF} {Length: 724} {NoTransDecoderORF} {RNA1509_32111} {RNA1310_40575} {RNA815_7836.1}
81. MligTC455_44126 14 0.28 Mlig455_055378

Neo: -

Age: Down-Up-Down

 TTLL13P 0.975 - - - - 0.975 - Mlig455_055378 {REF} {Length: 3061} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=269.8]; YheC/D like ATP-grasp [PF14398.8, score=24.7]; Sugar-transfer associated ATP-grasp [PF14397.8, score=20.6]} {Human: ENSG00000213471, TTLL13P, tubulin tyrosine ligase like 13, pseudogene, [RH, Score=564, Expect=0.0]} {Mouse: ENSMUSG00000045467, Ttll13, tubulin tyrosine ligase-like family, member 13, [RH, Score=580, Expect=0.0]} {Dmel: FBgn0039501, CG5987, [Score=444, Expect=1e-143]} {Celegans: WBGene00019230, ttll-11, Tubulin Tyrosine Ligase Like, [Score=206, Expect=2e-56]} {Smed: dd_Smed_v6_8131_0_1, dd_Smed_v6_8131_0_1, [Score=679, Expect=0.0]} {RNA1509_17118} {RNA1310_6646.1} {RNA815_17546}
82. MligTC455_18799 47 0.98 Mlig455_031256, Mlig455_031302

Neo: -

Age: -

 0.974 - - - - - 0.974

Mlig455_031256 {REF} {Length: 1098}

Mlig455_031302 {REF} {Length: 1102}
83. MligTC455_19917 83 1.72 Mlig455_057932, Mlig455_057967

Neo: -

Age: -

 0.974 - - - - - 0.974

Mlig455_057932 {REF} {Length: 2189} {RNA1310_65401} {RNA815_48417}

Mlig455_057967 {REF} {Length: 1876} {RNA1310_65401} {RNA815_48417}
84. MligTC455_26668 406 8.46 Mlig455_011365

Neo: -

Age: -

Regeneration-upregulated BL: 6.270

Regeneration-enriched BL: 6.270

 0.974 - - - - - 0.974 Mlig455_011365 {REF} {Length: 3699} {Pfam: Protein of unknown function (DUF1104) [PF06518.13, score=20.7]} {RNA1509_40399} {RNA1310_340.1} {RNA815_1857}
85. MligTC455_08618 16 0.33 Mlig455_067561

Neo: -

Age: -

 0.973 - - - - 0.973 - Mlig455_067561 {REF} {Length: 675} {Pfam: Integrase zinc binding domain [PF17921.3, score=45.4]; H2C2 zinc finger [PF09337.12, score=18.8]} {Smed: dd_Smed_v6_18260_0_1, dd_Smed_v6_18260_0_1, [RH, Score=42.7, Expect=9e-06]}
86. MligTC455_30679 25 0.52 Mlig455_019397, Mlig455_056063, Mlig455_061587

Neo: -

Age: -

Region-enriched R4: 1.545/0.03801

 NYNRIN 0.973 - - - - 0.973 -

Mlig455_019397 {REF} {Length: 1298} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=38.6]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=88.6, Expect=3e-19]} {RNA1509_29748} {RNA1310_1140.1} {RNA815_993.1}

Mlig455_056063 {REF} {Length: 4562} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=69.9]; Integrase zinc binding domain [PF17921.3, score=66.8]; Integrase core domain [PF00665.28, score=50.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.3]; Aspartyl protease [PF13650.8, score=28.2]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=95.5, Expect=5e-19]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=99.8, Expect=2e-20]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=447, Expect=3e-137]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1}

Mlig455_061587 {REF} {Length: 3872} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=120.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.0]; Integrase zinc binding domain [PF17921.3, score=67.0]; Integrase core domain [PF00665.28, score=50.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.4]; Aspartyl protease [PF13650.8, score=28.3]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=96.7, Expect=2e-19]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=100, Expect=8e-21]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=446, Expect=1e-137]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1}
87. MligTC455_31325 78 1.62 Mlig455_026709, Mlig455_044580, Mlig455_050736, Mlig455_050745

Neo: -

Age: -

 0.973 - - - - - 0.973

Mlig455_026709 {REF} {Length: 5107} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=119.6]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=19.1]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.1, Expect=2e-12]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_6291.1}

Mlig455_044580 {REF} {Length: 2183} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=80.6]} {RNA1509_47056} {RNA1310_3828} {RNA815_6291.1}

Mlig455_050736 {REF} {Length: 1564} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.6]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.9, Expect=7e-13]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_15609}

Mlig455_050745 {REF} {Length: 1565} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.6]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.9, Expect=7e-13]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_15609}
88. MligTC455_42325 270 5.62 Mlig455_016673

Neo: -

Age: Down-Up-Up

Region-enriched R7: 4.030/0.00009

 EVX1 0.973 - - - - - 0.973 Mlig455_016673 {REF} {Length: 1449} {Pfam: Homeodomain [PF00046.31, score=74.8]} {Human: ENSG00000106038, EVX1, even-skipped homeobox 1, [RH, Score=131, Expect=1e-34]; ENSG00000174279, EVX2, even-skipped homeobox 2, [RH, Score=130, Expect=7e-34]} {Mouse: ENSMUSG00000005503, Evx1, even-skipped homeobox 1, [RH, Score=131, Expect=1e-34]; ENSMUSG00000001815, Evx2, even-skipped homeobox 2, [RH, Score=131, Expect=3e-34]} {Dmel: FBgn0000606, eve, even skipped, [RH, Score=136, Expect=4e-37]} {Celegans: WBGene00006873, vab-7, Homeobox protein vab-7, [RH, Score=110, Expect=3e-28]} {Smed: dd_Smed_v6_18147_0_1, dd_Smed_v6_18147_0_1, [RH, Score=117, Expect=2e-32]} {RNA1509_36832} {RNA1310_42544, RNA1509_36832} {RNA1509_36832, RNA815_33148}
89. MligTC455_49680 33 0.68 Mlig455_066279

Neo: -

Age: -

Regeneration-upregulated R2: 5.712

Regeneration-enriched R2: 5.712

 0.973 - - - - 0.973 - Mlig455_066279 {REF} {Length: 1223} {NoTransDecoderORF} {RNA1310_109920}
90. MligTC455_22150 189 3.94 Mlig455_054947

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=2.071

 XDH 0.972 - - - - 0.972 - Mlig455_054947 {REF} {Length: 5481} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=346.4]; [2Fe-2S] binding domain [PF01799.22, score=95.7]; FAD binding domain in molybdopterin dehydrogenase [PF00941.23, score=91.5]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.19, score=51.5]; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain [PF01315.24, score=47.3]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=25.1]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=476, Expect=9e-146]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=471, Expect=4e-144]; ENSMUSG00000079554, Aox2, aldehyde oxidase 2, [Score=457, Expect=7e-139]; ENSMUSG00000063558, Aox1, aldehyde oxidase 1, [Score=456, Expect=1e-138]; ENSMUSG00000038242, Aox4, aldehyde oxidase 4, [Score=449, Expect=5e-136]} {Dmel: FBgn0267408, AOX1, Aldehyde oxidase 1, [Score=640, Expect=0.0]} {Celegans: WBGene00010083, xhd-1, [Score=485, Expect=1e-149]} {RNA1509_325, RNA1509_38160} {RNA1310_1603.1, RNA1509_38160} {RNA1509_38160, RNA815_224.2}
91. MligTC455_25755 59 1.24 Mlig455_006038, Mlig455_055389

Neo: -

Age: Up-Down-Down

 0.972 - - - - - 0.972

Mlig455_006038 {REF} {Length: 211} {NoTransDecoderORF} {RNA1509_18220} {RNA1310_20249} {RNA815_11842.1}

Mlig455_055389 {REF} {Length: 5005} {RNA1509_26204} {RNA1310_7137} {RNA815_17475}
92. MligTC455_46637 18 0.37 Mlig455_010742

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R2: 6.787/0.03510

 LMX1B 0.972 - - - - 0.972 - Mlig455_010742 {REF} {Length: 2975} {Pfam: LIM domain [PF00412.24, score=101.8]; Homeodomain [PF00046.31, score=64.1]; Homeobox KN domain [PF05920.13, score=27.5]; Auxin canalisation [PF05703.13, score=20.5]} {Human: ENSG00000136944, LMX1B, LIM homeobox transcription factor 1 beta, [RH, Score=241, Expect=3e-76]; ENSG00000162761, LMX1A, LIM homeobox transcription factor 1 alpha, [RH, Score=238, Expect=3e-75]} {Mouse: ENSMUSG00000038765, Lmx1b, LIM homeobox transcription factor 1 beta, [RH, Score=241, Expect=2e-76]; ENSMUSG00000026686, Lmx1a, LIM homeobox transcription factor 1 alpha, [RH, Score=233, Expect=2e-73]} {Dmel: FBgn0052105, Lmx1a, LIM homeobox transcription factor 1 alpha, [RH, Score=236, Expect=7e-72]} {Celegans: WBGene00002988, lim-6, LIM domain family, [Score=182, Expect=1e-54]} {Smed: dd_Smed_v6_13371_0_1, dd_Smed_v6_13371_0_1, [RH, Score=171, Expect=2e-49]} {RNA1509_10207} {RNA1310_5646.2} {RNA815_25330}
93. MligTC455_50250 182 3.8 Mlig455_066969

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.390

 SIM1 0.972 - - - - - 0.972 Mlig455_066969 {REF} {Length: 3256} {Pfam: PAS fold [PF08447.14, score=73.2]; PAS fold [PF00989.27, score=58.1]; PAS domain [PF14598.8, score=53.9]; Helix-loop-helix DNA-binding domain [PF00010.28, score=22.4]} {Human: ENSG00000112246, SIM1, SIM bHLH transcription factor 1, [RH, Score=526, Expect=2e-175]; ENSG00000159263, SIM2, SIM bHLH transcription factor 2, [RH, Score=522, Expect=4e-175]} {Mouse: ENSMUSG00000019913, Sim1, single-minded family bHLH transcription factor 1, [RH, Score=525, Expect=4e-175]; ENSMUSG00000062713, Sim2, single-minded family bHLH transcription factor 2, [RH, Score=522, Expect=5e-179]} {Dmel: FBgn0004666, sim, single-minded, [RH, Score=471, Expect=2e-155]} {Celegans: WBGene00011327, hlh-34, Helix-loop-helix 34, [RH, Score=128, Expect=3e-32]} {Smed: dd_Smed_v6_17731_0_1, dd_Smed_v6_17731_0_1, [RH, Score=511, Expect=3e-171]} {RNA1310_34436} {RNA815_20408}
94. MligTC455_57674 14 0.3 Mlig455_065260

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_065260 {REF} {Length: 346} {NoTransDecoderORF} {RNA1509_41294} {RNA1310_105871}
95. MligTC455_06090 223 4.65 Mlig455_037743

Neo: -

Age: Down-Up-Up

 0.971 - - - - 0.971 - Mlig455_037743 {REF} {Length: 1087} {RNA1509_10108} {RNA1310_12853.1} {RNA815_29647}
96. MligTC455_12197 252 5.26 Mlig455_017087

Neo: -

Age: Down-Down-Up

Region-enriched R5: 1.888/0.03999

 CXorf65 0.971 - - - - - 0.971 Mlig455_017087 {REF} {Length: 1998} {Pfam: Putative Interleukin 2 receptor, gamma chain [PF15874.7, score=80.7]} {Human: ENSG00000204165, CXorf65, chromosome X open reading frame 65, [Score=45.8, Expect=5e-06]} {Mouse: ENSMUSG00000090141, Gm614, predicted gene 614, [Score=48.9, Expect=3e-07]} {RNA1509_30706} {RNA1310_4498.2} {RNA815_1649}
97. MligTC455_27802 89 1.86 Mlig455_057249

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_057249 {REF} {Length: 8422} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=129.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.3]; Integrase zinc binding domain [PF17921.3, score=71.9]; Integrase core domain [PF00665.28, score=47.6]; Aspartyl protease [PF13650.8, score=39.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.0]; Retroviral aspartyl protease [PF00077.22, score=28.6]; Aspartyl protease [PF09668.12, score=23.4]; Putative peptidase (DUF1758) [PF05585.14, score=22.5]; Retroviral aspartyl protease [PF08284.13, score=19.6]; DDE superfamily endonuclease [PF13358.8, score=19.1]} {Smed: dd_Smed_v6_1574_6_40, dd_Smed_v6_1574_6_40, [Score=342, Expect=8e-103]} {RNA1509_28802} {RNA1310_131.1} {RNA815_52.1}
98. MligTC455_31602 208 4.33 Mlig455_031241, Mlig455_031248

Neo: -

Age: -

 0.971 - - - - - 0.971

Mlig455_031241 {REF} {Length: 1588} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36986} {RNA1310_4605} {RNA815_16115.1}

Mlig455_031248 {REF} {Length: 2570} {TRANSSPLICED} {RNA1509_36986} {RNA1310_45653} {RNA815_16115.2}
99. MligTC455_08061 14 0.29 Mlig455_062790

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_062790 {REF} {Length: 604} {NoTransDecoderORF} {RNA1310_101890}
100. MligTC455_08498 26 0.55 Mlig455_053380

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_053380 {REF} {Length: 962} {NoTransDecoderORF} {RNA1310_91082}

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