TomoSeq data search

Data search

Results for MligTC455_25376

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_25376	1118	23.29	Mlig455_012835	Neo: - Age: - Region-enriched R4: 1.244/0.00982	PPP4R3A	Mlig455_012835 {REF} {Length: 4943} {TRANSSPLICED} {Pfam: Component of IIS longevity pathway SMK-1 [PF04802.17, score=190.7]} {Human: ENSG00000100796, PPP4R3A, protein phosphatase 4 regulatory subunit 3A, [RH, Score=667, Expect=0.0]; ENSG00000275052, PPP4R3B, protein phosphatase 4 regulatory subunit 3B, [RH, Score=657, Expect=0.0]} {Mouse: ENSMUSG00000041846, Ppp4r3a, protein phosphatase 4 regulatory subunit 3A, [RH, Score=665, Expect=0.0]; ENSMUSG00000020463, Ppp4r3b, protein phosphatase 4 regulatory subunit 3B, [RH, Score=658, Expect=0.0]} {Dmel: FBgn0024555, flfl, falafel, [RH, Score=653, Expect=0.0]} {Celegans: WBGene00018285, smk-1, SMEK (Dictyostelium Suppressor of MEK null) homolog, [RH, Score=469, Expect=2e-148]} {Smed: dd_Smed_v6_4095_0_2, dd_Smed_v6_4095_0_2, [RH, Score=563, Expect=0.0]} {RNA1509_4186, RNA1509_49355} {RNA1310_6268.1, RNA1509_49355} {RNA1509_49355, RNA815_3650}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25376

1118

23.29

Mlig455_012835

Neo: -

Age: -

Region-enriched R4: 1.244/0.00982

PPP4R3A

Mlig455_012835 {REF} {Length: 4943} {TRANSSPLICED} {Pfam: Component of IIS longevity pathway SMK-1 [PF04802.17, score=190.7]} {Human: ENSG00000100796, PPP4R3A, protein phosphatase 4 regulatory subunit 3A, [RH, Score=667, Expect=0.0]; ENSG00000275052, PPP4R3B, protein phosphatase 4 regulatory subunit 3B, [RH, Score=657, Expect=0.0]} {Mouse: ENSMUSG00000041846, Ppp4r3a, protein phosphatase 4 regulatory subunit 3A, [RH, Score=665, Expect=0.0]; ENSMUSG00000020463, Ppp4r3b, protein phosphatase 4 regulatory subunit 3B, [RH, Score=658, Expect=0.0]} {Dmel: FBgn0024555, flfl, falafel, [RH, Score=653, Expect=0.0]} {Celegans: WBGene00018285, smk-1, SMEK (Dictyostelium Suppressor of MEK null) homolog, [RH, Score=469, Expect=2e-148]} {Smed: dd_Smed_v6_4095_0_2, dd_Smed_v6_4095_0_2, [RH, Score=563, Expect=0.0]} {RNA1509_4186, RNA1509_49355} {RNA1310_6268.1, RNA1509_49355} {RNA1509_49355, RNA815_3650}

Cumulative graph for MligTC455_25376

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.499	4.832	0.63513	1.00000
RegionR2	-0.25	4.832	0.52704	0.89917
RegionR3	0.082	4.832	0.79277	1.00000
RegionR4	1.244	4.832	0.00093	0.00982
RegionR5	-0.117	4.832	0.70335	1.00000
RegionR6	-0.041	4.832	0.90148	1.00000
RegionR7	-0.254	4.832	0.55897	1.00000
RegionR8	-0.166	4.832	0.74995	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.701	4.832	0.58693	1.00000
RegenerationR2	0.27	4.832	0.39861	0.81406
RegenerationR3	-0.226	4.832	0.52450	0.86899
RegenerationR4	-0.781	4.832	0.03401	0.29764
RegenerationR5	0.318	4.832	0.34699	0.76169
RegenerationR6	0.341	4.832	0.33290	0.67916
RegenerationBL	0.434	4.832	0.28054	0.64177
RegenerationTP	-0.447	4.832	0.36483	0.80368

Genes with expression patterns similar to MligTC455_25376

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25376	1118	23.29	Mlig455_012835	Neo: - Age: - Region-enriched R4: 1.244/0.00982	PPP4R3A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_012835 {REF} {Length: 4943} {TRANSSPLICED} {Pfam: Component of IIS longevity pathway SMK-1 [PF04802.17, score=190.7]} {Human: ENSG00000100796, PPP4R3A, protein phosphatase 4 regulatory subunit 3A, [RH, Score=667, Expect=0.0]; ENSG00000275052, PPP4R3B, protein phosphatase 4 regulatory subunit 3B, [RH, Score=657, Expect=0.0]} {Mouse: ENSMUSG00000041846, Ppp4r3a, protein phosphatase 4 regulatory subunit 3A, [RH, Score=665, Expect=0.0]; ENSMUSG00000020463, Ppp4r3b, protein phosphatase 4 regulatory subunit 3B, [RH, Score=658, Expect=0.0]} {Dmel: FBgn0024555, flfl, falafel, [RH, Score=653, Expect=0.0]} {Celegans: WBGene00018285, smk-1, SMEK (Dictyostelium Suppressor of MEK null) homolog, [RH, Score=469, Expect=2e-148]} {Smed: dd_Smed_v6_4095_0_2, dd_Smed_v6_4095_0_2, [RH, Score=563, Expect=0.0]} {RNA1509_4186, RNA1509_49355} {RNA1310_6268.1, RNA1509_49355} {RNA1509_49355, RNA815_3650}
2.	MligTC455_29068	1031	21.49	Mlig455_019054, Mlig455_055636, Mlig455_055652	Neo: - Age: Up-Down-Down Region-enriched R4: 2.042/0.00291		1.661	-	-	-	0.951	-	0.710	Mlig455_019054 {REF} {Length: 2887} {Pfam: PEHE domain [PF15275.8, score=29.6]} {RNA1509_51188} {RNA1310_24534, RNA1509_51188} {RNA1509_51188, RNA815_26398} Mlig455_055636 {REF} {Length: 2942} {Pfam: PEHE domain [PF15275.8, score=32.8]} {RNA1509_41208, RNA1509_51188} {RNA1310_24534, RNA1509_41208} {RNA1509_41208, RNA815_26398} Mlig455_055652 {REF} {Length: 3049} {TRANSSPLICED} {Pfam: PEHE domain [PF15275.8, score=29.8]} {RNA1509_51188} {RNA1310_24534} {RNA815_26398}
3.	MligTC455_26660	429	8.93	Mlig455_064801	Neo: - Age: Up-Down-Down Region-enriched R5: 1.606/0.02788	CHMP7	0.959	-	-	-	0.959	-	-	Mlig455_064801 {REF} {Length: 2058} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=71.8]} {Human: ENSG00000147457, CHMP7, charged multivesicular body protein 7, [RH, Score=86.7, Expect=1e-17]} {Mouse: ENSMUSG00000034190, Chmp7, charged multivesicular body protein 7, [RH, Score=84.7, Expect=4e-17]} {Celegans: WBGene00011976, T24B8.2, [RH, Score=97.8, Expect=8e-22]} {Smed: dd_Smed_v6_7879_0_1, dd_Smed_v6_7879_0_1, [RH, Score=87.8, Expect=2e-19]} {RNA1509_29111} {RNA1310_16436.1} {RNA815_6674.1}
4.	MligTC455_51657	526	10.96	Mlig455_012205, Mlig455_069066	Neo: - Age: - Region-enriched R5: 1.595/0.04388		0.957	-	-	-	0.957	-	-	Mlig455_012205 {REF} {Length: 2917} {TRANSSPLICED} {RNA1509_58492} {RNA1310_6222.1} {RNA815_11096} Mlig455_069066 {REF} {Length: 2856} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=19.5]} {RNA1509_58492} {RNA1310_6222.1} {RNA815_11096}