Data search
Results for MligTC455_25536
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25536 | 479 | 9.98 | Mlig455_004631, Mlig455_004725 | Neo: - Age: - Regeneration-upregulated TP: 5.718 Regeneration-enriched TP: 5.718 |
Mlig455_004631 {REF} {Length: 4059} {Pfam: Gamma tubulin complex component C-terminal [PF04130.15, score=54.7]; Gamma tubulin complex component N-terminal [PF17681.3, score=19.7]} {Mouse: ENSMUSG00000033790, Tubgcp5, tubulin, gamma complex associated protein 5, [Score=53.1, Expect=2e-06]} {RNA1509_14096} {RNA1310_20412, RNA1509_14096} {RNA1509_14096, RNA815_17783} Mlig455_004725 {REF} {Length: 3610} {TRANSSPLICED} {Pfam: Gamma tubulin complex component C-terminal [PF04130.15, score=55.7]; Gamma tubulin complex component N-terminal [PF17681.3, score=19.0]} {Mouse: ENSMUSG00000033790, Tubgcp5, tubulin, gamma complex associated protein 5, [Score=55.1, Expect=4e-07]} {RNA1509_14096} {RNA1310_20412} {RNA815_17783} |
Cumulative graph for MligTC455_25536
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.821 | 3.674 | 0.52313 | 1.00000 | |
| RegionR2 | 2.133 | 3.674 | 0.00592 | 0.07166 | |
| RegionR3 | 0.87 | 3.674 | 0.21812 | 0.75924 | |
| RegionR4 | 0.893 | 3.674 | 0.25690 | 0.55818 | |
| RegionR5 | 1.343 | 3.674 | 0.02874 | 0.12579 | |
| RegionR6 | 1.615 | 3.674 | 0.01229 | 0.19102 | |
| RegionR7 | -0.944 | 3.674 | 0.97794 | 1.00000 | |
| RegionR8 | -6.73 | 3.674 | 0.00572 | 0.13691 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.25 | 3.674 | 0.15570 | 0.89903 | |
| RegenerationR2 | 0.288 | 3.674 | 0.56873 | 0.90198 | |
| RegenerationR3 | 1.251 | 3.674 | 0.03572 | 0.33479 | |
| RegenerationR4 | 0.065 | 3.674 | 0.91512 | 1.00000 | |
| RegenerationR5 | 1.797 | 3.674 | 0.00065 | 0.04286 | |
| RegenerationR6 | 0.715 | 3.674 | 0.20782 | 0.55057 | |
| RegenerationBL | 3.67 | 3.674 | 0.00120 | 0.02581 | |
| RegenerationTP | 5.718 | 3.674 | 0.00001 | 0.00181 | Specific for TP: 5.718 |
Genes with expression patterns similar to MligTC455_25536
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25536 | 479 | 9.98 | Mlig455_004631, Mlig455_004725 | Neo: - Age: - Regeneration-upregulated TP: 5.718 Regeneration-enriched TP: 5.718 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_004631 {REF} {Length: 4059} {Pfam: Gamma tubulin complex component C-terminal [PF04130.15, score=54.7]; Gamma tubulin complex component N-terminal [PF17681.3, score=19.7]} {Mouse: ENSMUSG00000033790, Tubgcp5, tubulin, gamma complex associated protein 5, [Score=53.1, Expect=2e-06]} {RNA1509_14096} {RNA1310_20412, RNA1509_14096} {RNA1509_14096, RNA815_17783} Mlig455_004725 {REF} {Length: 3610} {TRANSSPLICED} {Pfam: Gamma tubulin complex component C-terminal [PF04130.15, score=55.7]; Gamma tubulin complex component N-terminal [PF17681.3, score=19.0]} {Mouse: ENSMUSG00000033790, Tubgcp5, tubulin, gamma complex associated protein 5, [Score=55.1, Expect=4e-07]} {RNA1509_14096} {RNA1310_20412} {RNA815_17783} |
|
| 2. | MligTC455_48833 | 702 | 14.62 | Mlig455_006923, Mlig455_017937 | Neo: - Age: - Region-enriched R5: 1.677/0.02053 |
RNF2 | 1.779 | 0.821 | - | - | - | - | 0.958 | Mlig455_006923 {REF} {Length: 2956} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=53.5]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Ring finger domain [PF13639.8, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.2]; RING-type zinc-finger [PF13445.8, score=22.4]; zinc-RING finger domain [PF14634.8, score=20.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=19.4]} {Human: ENSG00000121481, RNF2, ring finger protein 2, [RH, Score=252, Expect=1e-80]} {Mouse: ENSMUSG00000026484, Rnf2, ring finger protein 2, [RH, Score=252, Expect=9e-81]; ENSMUSG00000024325, Ring1, ring finger protein 1, [RH, Score=242, Expect=6e-76]} {Dmel: FBgn0003330, Sce, Sex combs extra, [RH, Score=226, Expect=9e-70]} {Celegans: WBGene00020496, spat-3, Suppressor of PAr-Two defect, [RH, Score=82.8, Expect=9e-17]} {Smed: dd_Smed_v6_8989_0_1, dd_Smed_v6_8989_0_1, [RH, Score=191, Expect=2e-56]} {RNA1509_26957} {RNA1310_17990, RNA1509_26957} {RNA1509_26957, RNA815_16348} Mlig455_017937 {REF} {Length: 2921} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=53.5]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Ring finger domain [PF13639.8, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.2]; RING-type zinc-finger [PF13445.8, score=22.4]; zinc-RING finger domain [PF14634.8, score=20.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=19.4]} {Human: ENSG00000121481, RNF2, ring finger protein 2, [RH, Score=252, Expect=1e-80]} {Mouse: ENSMUSG00000026484, Rnf2, ring finger protein 2, [RH, Score=252, Expect=9e-81]; ENSMUSG00000024325, Ring1, ring finger protein 1, [RH, Score=242, Expect=6e-76]} {Dmel: FBgn0003330, Sce, Sex combs extra, [RH, Score=226, Expect=9e-70]} {Celegans: WBGene00020496, spat-3, Suppressor of PAr-Two defect, [RH, Score=82.8, Expect=9e-17]} {Smed: dd_Smed_v6_8989_0_1, dd_Smed_v6_8989_0_1, [RH, Score=191, Expect=2e-56]} {RNA1509_26957} {RNA1310_17990} {RNA815_16348} |
| 3. | MligTC455_42937 | 128 | 2.66 | Mlig455_043268 | Neo: - |
USH1G | 0.979 | - | - | 0.979 | - | - | - | Mlig455_043268 {REF} {Length: 4072} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=75.4]; Ankyrin repeats (many copies) [PF13637.8, score=51.5]; Ankyrin repeat [PF00023.32, score=40.4]; Ankyrin repeats (many copies) [PF13857.8, score=38.1]; Ankyrin repeat [PF13606.8, score=36.2]; SAM domain (Sterile alpha motif) [PF00536.32, score=30.9]; Pyoverdine/dityrosine biosynthesis protein [PF05141.14, score=18.1]} {Human: ENSG00000182040, USH1G, USH1 protein network component sans, [Score=201, Expect=6e-58]} {Mouse: ENSMUSG00000045288, Ush1g, USH1 protein network component sans, [Score=204, Expect=4e-59]} {Dmel: FBgn0033785, Sans, Scaffold protein containing ankyrin repeats and SAM domain, [RH, Score=149, Expect=7e-39]} {Celegans: WBGene00013835, mlt-4, Molting protein MLT-4, [Score=62.0, Expect=6e-10]} {Smed: dd_Smed_v6_68524_0_1, dd_Smed_v6_68524_0_1, [RH, Score=113, Expect=8e-29]} {RNA1509_17342} {RNA1310_11835.1} {RNA815_5253} |
| 4. | MligTC455_38660 | 334 | 6.95 | Mlig455_037343 | Neo: - Age: - Region-enriched R2: 2.080/0.03909 |
0.97 | - | - | 0.970 | - | - | - | Mlig455_037343 {REF} {Length: 3563} {TRANSSPLICED} {Dmel: FBgn0029807, CG3108, [Score=52.4, Expect=2e-06]} {RNA1509_47794} {RNA1310_6012.1} {RNA815_8165} | |
| 5. | MligTC455_52054 | 151 | 3.14 | Mlig455_042770 | Neo: - Age: - |
VPS26A | 0.965 | - | - | - | - | - | 0.965 | Mlig455_042770 {REF} {Length: 2459} {TRANSSPLICED} {Pfam: Vacuolar protein sorting-associated protein 26 [PF03643.17, score=418.5]} {Human: ENSG00000122958, VPS26A, VPS26, retromer complex component A, [RH, Score=450, Expect=2e-158]} {Mouse: ENSMUSG00000020078, Vps26a, VPS26 retromer complex component A, [RH, Score=448, Expect=7e-158]} {Dmel: FBgn0014411, Vps26, Vacuolar protein sorting 26, [RH, Score=444, Expect=2e-154]} {Celegans: WBGene00006931, vps-26, Vacuolar protein sorting-associated protein 26, [Score=431, Expect=9e-151]} {Smed: dd_Smed_v6_3214_0_1, dd_Smed_v6_3214_0_1, [RH, Score=454, Expect=7e-160]} {RNA1509_19094} {RNA1310_25058, RNA1509_19094} {RNA1509_19094, RNA815_12346} |
| 6. | MligTC455_21123 | 831 | 17.32 | Mlig455_026440, Mlig455_026472 | Neo: - Age: - |
ZC3H12A, ZC3H12C | 0.957 | - | - | - | - | - | 0.957 | Mlig455_026440 {REF} {Length: 3824} {TRANSSPLICED} {Pfam: Zc3h12a-like Ribonuclease NYN domain [PF11977.10, score=107.9]} {Human: ENSG00000163874, ZC3H12A, zinc finger CCCH-type containing 12A, [RH, Score=124, Expect=9e-29]; ENSG00000149289, ZC3H12C, zinc finger CCCH-type containing 12C, [RH, Score=124, Expect=2e-28]; ENSG00000102053, ZC3H12B, zinc finger CCCH-type containing 12B, [RH, Score=121, Expect=1e-27]; ENSG00000100441, KHNYN, KH and NYN domain containing, [RH, Score=118, Expect=8e-27]} {Mouse: ENSMUSG00000042677, Zc3h12a, zinc finger CCCH type containing 12A, [RH, Score=126, Expect=9e-30]; ENSMUSG00000035164, Zc3h12c, zinc finger CCCH type containing 12C, [RH, Score=125, Expect=8e-29]; ENSMUSG00000035045, Zc3h12b, zinc finger CCCH-type containing 12B, [RH, Score=120, Expect=2e-27]; ENSMUSG00000039981, Zc3h12d, zinc finger CCCH type containing 12D, [RH, Score=120, Expect=4e-28]} {Dmel: FBgn0038769, CG10889, [RH, Score=127, Expect=2e-30]} {Celegans: WBGene00016260, rege-1, Endoribonuclease rege-1, [RH, Score=98.2, Expect=6e-21]} {Smed: dd_Smed_v6_8040_0_1, dd_Smed_v6_8040_0_1, [RH, Score=102, Expect=3e-23]} {RNA1509_35735} {RNA1310_4673} {RNA815_1928.1} Mlig455_026472 {REF} {Length: 4337} {TRANSSPLICED} {Pfam: Zc3h12a-like Ribonuclease NYN domain [PF11977.10, score=107.9]; AAA domain [PF13476.8, score=19.5]} {Human: ENSG00000149289, ZC3H12C, zinc finger CCCH-type containing 12C, [RH, Score=124, Expect=2e-28]; ENSG00000163874, ZC3H12A, zinc finger CCCH-type containing 12A, [RH, Score=124, Expect=1e-28]; ENSG00000102053, ZC3H12B, zinc finger CCCH-type containing 12B, [RH, Score=121, Expect=1e-27]} {Mouse: ENSMUSG00000042677, Zc3h12a, zinc finger CCCH type containing 12A, [RH, Score=126, Expect=9e-30]; ENSMUSG00000035164, Zc3h12c, zinc finger CCCH type containing 12C, [RH, Score=125, Expect=8e-29]; ENSMUSG00000035045, Zc3h12b, zinc finger CCCH-type containing 12B, [RH, Score=120, Expect=2e-27]; ENSMUSG00000039981, Zc3h12d, zinc finger CCCH type containing 12D, [RH, Score=120, Expect=3e-28]} {Dmel: FBgn0038769, CG10889, [RH, Score=127, Expect=3e-30]} {Celegans: WBGene00016260, rege-1, Endoribonuclease rege-1, [RH, Score=98.6, Expect=6e-21]} {Smed: dd_Smed_v6_8040_0_1, dd_Smed_v6_8040_0_1, [RH, Score=102, Expect=3e-23]} {RNA1509_35735} {RNA1310_4673} {RNA815_1928.1} |
| 7. | MligTC455_42223 | 1053 | 21.94 | Mlig455_000147, Mlig455_067730 | Neo: - Age: - |
LDB2 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_000147 {REF} {Length: 5213} {Pfam: LIM-domain binding protein [PF01803.18, score=86.8]; LIM interaction domain (LID) [PF17916.3, score=44.9]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=196, Expect=4e-57]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=193, Expect=4e-56]; ENSMUSG00000025223, Ldb1, LIM domain binding 1, [Score=189, Expect=4e-54]} {Dmel: FBgn0013764, Chi, Chip, [Score=177, Expect=2e-48]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=87.0, Expect=8e-18]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=195, Expect=4e-55]} {RNA1509_23423} {RNA1310_8456, RNA1509_23423} {RNA1509_23423, RNA815_4815} Mlig455_067730 {REF} {Length: 5302} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=86.6]; LIM interaction domain (LID) [PF17916.3, score=44.9]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=197, Expect=1e-57]; ENSG00000198728, LDB1, LIM domain binding 1, [Score=191, Expect=9e-55]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=195, Expect=7e-57]; ENSMUSG00000025223, Ldb1, LIM domain binding 1, [Score=191, Expect=8e-55]} {Dmel: FBgn0013764, Chi, Chip, [Score=176, Expect=8e-48]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=90.5, Expect=5e-19]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=197, Expect=9e-56]} {RNA1509_23423} {RNA1310_8456} {RNA815_4815} |