Data search
Results for MligTC455_25603
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25603 | 386 | 8.05 | Mlig455_062129 | Neo: - Age: - |
ADAP1 | Mlig455_062129 {REF} {Length: 4009} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=73.6]; Putative GTPase activating protein for Arf [PF01412.20, score=54.3]; Plant pleckstrin homology-like region [PF08458.12, score=19.2]} {Human: ENSG00000105963, ADAP1, ArfGAP with dual PH domains 1, [Score=204, Expect=8e-62]} {Mouse: ENSMUSG00000056413, Adap1, ArfGAP with dual PH domains 1, [Score=197, Expect=2e-59]} {Celegans: WBGene00012359, W09D10.1, [Score=63.2, Expect=1e-10]} {Smed: dd_Smed_v6_1479_0_1, dd_Smed_v6_1479_0_1, [RH, Score=152, Expect=2e-42]} {RNA1509_18344} {RNA1310_14779, RNA1509_18344} {RNA1509_18344, RNA815_11638} |
Cumulative graph for MligTC455_25603
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.869 | 3.431 | 0.54752 | 1.00000 | |
| RegionR2 | -0.26 | 3.431 | 0.65066 | 0.98534 | |
| RegionR3 | -1.038 | 3.431 | 0.04452 | 0.36895 | |
| RegionR4 | -0.581 | 3.431 | 0.27532 | 0.58195 | |
| RegionR5 | 0.793 | 3.431 | 0.03419 | 0.14235 | |
| RegionR6 | 0.998 | 3.431 | 0.01467 | 0.21134 | |
| RegionR7 | 1.004 | 3.431 | 0.06116 | 0.47466 | |
| RegionR8 | -0.047 | 3.431 | 0.95434 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.044 | 3.431 | 0.98334 | 1.00000 | |
| RegenerationR2 | 0.45 | 3.431 | 0.29642 | 0.73896 | |
| RegenerationR3 | 0.74 | 3.431 | 0.15976 | 0.59248 | |
| RegenerationR4 | -0.116 | 3.431 | 0.81610 | 0.99171 | |
| RegenerationR5 | 0.131 | 3.431 | 0.74647 | 0.97083 | |
| RegenerationR6 | -0.253 | 3.431 | 0.56914 | 0.85096 | |
| RegenerationBL | -0.591 | 3.431 | 0.33492 | 0.70157 | |
| RegenerationTP | -0.665 | 3.431 | 0.33741 | 0.78134 |
Genes with expression patterns similar to MligTC455_25603
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25603 | 386 | 8.05 | Mlig455_062129 | Neo: - Age: - |
ADAP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_062129 {REF} {Length: 4009} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=73.6]; Putative GTPase activating protein for Arf [PF01412.20, score=54.3]; Plant pleckstrin homology-like region [PF08458.12, score=19.2]} {Human: ENSG00000105963, ADAP1, ArfGAP with dual PH domains 1, [Score=204, Expect=8e-62]} {Mouse: ENSMUSG00000056413, Adap1, ArfGAP with dual PH domains 1, [Score=197, Expect=2e-59]} {Celegans: WBGene00012359, W09D10.1, [Score=63.2, Expect=1e-10]} {Smed: dd_Smed_v6_1479_0_1, dd_Smed_v6_1479_0_1, [RH, Score=152, Expect=2e-42]} {RNA1509_18344} {RNA1310_14779, RNA1509_18344} {RNA1509_18344, RNA815_11638} |
| 2. | MligTC455_49890 | 261 | 5.44 | Mlig455_015855 | Neo: - Age: - |
SLC44A1 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_015855 {REF} {Length: 5232} {TRANSSPLICED} {Pfam: Plasma-membrane choline transporter [PF04515.14, score=199.0]} {Human: ENSG00000070214, SLC44A1, solute carrier family 44 member 1, [RH, Score=261, Expect=3e-76]} {Mouse: ENSMUSG00000028412, Slc44a1, solute carrier family 44, member 1, [RH, Score=265, Expect=9e-78]} {Dmel: FBgn0035523, Ctl1, Choline transporter-like 1, [RH, Score=260, Expect=6e-76]} {Celegans: WBGene00018037, chtl-1, Choline transporter-like protein 1, [Score=115, Expect=2e-26]} {Smed: dd_Smed_v6_4049_0_1, dd_Smed_v6_4049_0_1, [RH, Score=281, Expect=5e-84]} {RNA1509_16805, RNA1509_40153} {RNA1310_5849, RNA1509_16805, RNA1509_40153} {RNA1509_16805, RNA1509_40153, RNA815_2956.1} |
| 3. | MligTC455_28679 | 336 | 7.01 | Mlig455_003817 | Neo: - Age: - |
ZAN | 0.963 | - | - | - | - | - | 0.963 | Mlig455_003817 {REF} {Length: 3854} {TRANSSPLICED} {Pfam: Potential DNA-binding domain [PF13891.8, score=41.9]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=120, Expect=8e-27]} {Dmel: FBgn0037836, CG14692, [RH, Score=102, Expect=9e-22]} {RNA1509_19762, RNA1509_58225} {RNA1310_6493.1, RNA1509_19762, RNA1509_58225} {RNA1509_19762, RNA1509_58225, RNA815_7064} |
| 4. | MligTC455_44605 | 224 | 4.67 | Mlig455_031237 | Neo: - Age: - Region-enriched R5: 1.873/0.02978 |
CHRNA9 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_031237 {REF} {Length: 4257} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=144.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=113.8]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=211, Expect=8e-61]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=201, Expect=2e-56]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=201, Expect=3e-57]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=214, Expect=3e-62]} {Dmel: FBgn0000038, nAChRbeta1, nicotinic Acetylcholine Receptor beta1, [Score=196, Expect=2e-55]} {Celegans: WBGene00000050, acr-11, AcetylCholine Receptor, [Score=187, Expect=2e-52]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=446, Expect=2e-150]} {RNA1509_46245} {RNA1310_16441} {RNA815_17572} |
| 5. | MligTC455_43481 | 1770 | 36.88 | Mlig455_060289, Mlig455_066804, Mlig455_066869 | Neo: - Age: - |
RIC8B | 0.957 | - | - | - | - | - | 0.957 | Mlig455_060289 {REF} {Length: 2508} {TRANSSPLICED} {Pfam: Guanine nucleotide exchange factor synembryn [PF10165.11, score=238.5]} {Human: ENSG00000111785, RIC8B, RIC8 guanine nucleotide exchange factor B, [RH, Score=154, Expect=1e-39]; ENSG00000177963, RIC8A, RIC8 guanine nucleotide exchange factor A, [RH, Score=150, Expect=2e-38]} {Mouse: ENSMUSG00000035620, Ric8b, RIC8 guanine nucleotide exchange factor B, [RH, Score=151, Expect=8e-39]} {Dmel: FBgn0028292, ric8a, [RH, Score=169, Expect=3e-45]} {Celegans: WBGene00004367, ric-8, Synembryn, [RH, Score=126, Expect=2e-30]} {Smed: dd_Smed_v6_1142_0_2, dd_Smed_v6_1142_0_2, [RH, Score=180, Expect=4e-50]} {RNA1509_19238} {RNA1310_8529} {RNA815_16855} Mlig455_066804 {REF} {Length: 2522} {TRANSSPLICED} {Pfam: Guanine nucleotide exchange factor synembryn [PF10165.11, score=242.1]} {Human: ENSG00000111785, RIC8B, RIC8 guanine nucleotide exchange factor B, [RH, Score=157, Expect=7e-41]; ENSG00000177963, RIC8A, RIC8 guanine nucleotide exchange factor A, [RH, Score=151, Expect=9e-39]} {Mouse: ENSMUSG00000035620, Ric8b, RIC8 guanine nucleotide exchange factor B, [RH, Score=155, Expect=4e-40]} {Dmel: FBgn0028292, ric8a, [RH, Score=173, Expect=2e-46]} {Celegans: WBGene00004367, ric-8, Synembryn, [RH, Score=125, Expect=2e-30]} {Smed: dd_Smed_v6_1142_0_2, dd_Smed_v6_1142_0_2, [RH, Score=182, Expect=6e-51]} {RNA1509_19238} {RNA1310_8529, RNA1509_19238} {RNA1509_19238, RNA815_16855} Mlig455_066869 {REF} {Length: 2510} {TRANSSPLICED} {Pfam: Guanine nucleotide exchange factor synembryn [PF10165.11, score=242.1]} {Human: ENSG00000111785, RIC8B, RIC8 guanine nucleotide exchange factor B, [RH, Score=156, Expect=3e-40]; ENSG00000177963, RIC8A, RIC8 guanine nucleotide exchange factor A, [RH, Score=152, Expect=4e-39]} {Mouse: ENSMUSG00000035620, Ric8b, RIC8 guanine nucleotide exchange factor B, [RH, Score=153, Expect=1e-39]} {Dmel: FBgn0028292, ric8a, [RH, Score=171, Expect=6e-46]} {Celegans: WBGene00004367, ric-8, Synembryn, [RH, Score=126, Expect=2e-30]} {Smed: dd_Smed_v6_1142_0_2, dd_Smed_v6_1142_0_2, [RH, Score=182, Expect=8e-51]} {RNA1509_19238} {RNA1310_8529} {RNA815_16855} |
| 6. | MligTC455_26439 | 277 | 5.77 | Mlig455_013597 | Neo: Irradiation Age: Down-Up-Down |
0.956 | - | - | - | - | - | 0.956 | Mlig455_013597 {REF} {Length: 2976} {RNA1509_11549, RNA1509_27111} {RNA1310_13005, RNA1509_11549, RNA1509_27111} {RNA1509_11549, RNA1509_27111, RNA815_9058} | |
| 7. | MligTC455_17697 | 251 | 5.22 | Mlig455_057954 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_057954 {REF} {Length: 322} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_53364} {RNA1310_4884} {RNA815_2151} | |
| 8. | MligTC455_21671 | 433 | 9.02 | Mlig455_034206 | Neo: Irradiation Age: - Region-enriched R5: 1.128/0.02068 |
PRR9 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_034206 {REF} {Length: 2697} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=50.1, Expect=3e-07]} {Celegans: WBGene00018026, F35A5.4, [Score=63.5, Expect=6e-11]} {RNA1509_59164} {RNA1310_45940} {RNA815_9330.1} |
| 9. | MligTC455_49757 | 748 | 15.58 | Mlig455_049332, Mlig455_049406 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.402 Region-enriched R4: 1.305/0.04332 |
SAMM50 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_049332 {REF} {Length: 6446} {TRANSSPLICED} {Pfam: Omp85 superfamily domain [PF01103.25, score=92.5]} {Human: ENSG00000100347, SAMM50, SAMM50 sorting and assembly machinery component, [RH, Score=219, Expect=2e-65]} {Mouse: ENSMUSG00000022437, Samm50, SAMM50 sorting and assembly machinery component, [RH, Score=219, Expect=2e-65]} {Dmel: FBgn0033989, CG7639, [RH, Score=113, Expect=5e-27]} {Smed: dd_Smed_v6_4146_0_1, dd_Smed_v6_4146_0_1, [RH, Score=166, Expect=5e-46]} {RNA1509_11061} {RNA1310_15228, RNA1509_11061} {RNA1509_11061, RNA815_7353} Mlig455_049406 {REF} {Length: 4604} {TRANSSPLICED} {Pfam: Omp85 superfamily domain [PF01103.25, score=122.5]} {Human: ENSG00000100347, SAMM50, SAMM50 sorting and assembly machinery component, [RH, Score=218, Expect=6e-63]} {Mouse: ENSMUSG00000022437, Samm50, SAMM50 sorting and assembly machinery component, [RH, Score=218, Expect=4e-63]} {Dmel: FBgn0033989, CG7639, [RH, Score=113, Expect=2e-26]} {Smed: dd_Smed_v6_4146_0_1, dd_Smed_v6_4146_0_1, [RH, Score=165, Expect=2e-44]} {RNA1509_11061, RNA1509_15186} {RNA1310_15228, RNA1509_15186} {RNA1509_15186, RNA815_7353} |