TomoSeq data search

Data search

Results for MligTC455_25667

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_25667	392	8.16	Mlig455_008175, Mlig455_008214	Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R5: 1.157/0.00596	FANCM	Mlig455_008175 {REF} {Length: 6581} {TRANSSPLICED} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=77.7]; Type III restriction enzyme, res subunit [PF04851.17, score=64.3]; DEAD/DEAH box helicase [PF00270.31, score=53.9]} {Human: ENSG00000187790, FANCM, FA complementation group M, [RH, Score=630, Expect=0.0]} {Mouse: ENSMUSG00000055884, Fancm, Fanconi anemia, complementation group M, [RH, Score=619, Expect=0.0]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [RH, Score=443, Expect=2e-129]} {Celegans: WBGene00008400, drh-3, Dicer Related Helicase, [Score=82.0, Expect=4e-15]} {Smed: dd_Smed_v6_11718_0_1, dd_Smed_v6_11718_0_1, [RH, Score=563, Expect=2e-174]} {RNA1509_23421} {RNA1310_6333} {RNA815_11797} Mlig455_008214 {REF} {Length: 6352} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=77.6]; Type III restriction enzyme, res subunit [PF04851.17, score=64.4]; DEAD/DEAH box helicase [PF00270.31, score=54.1]} {Human: ENSG00000187790, FANCM, FA complementation group M, [RH, Score=623, Expect=0.0]} {Mouse: ENSMUSG00000055884, Fancm, Fanconi anemia, complementation group M, [RH, Score=616, Expect=0.0]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [RH, Score=441, Expect=5e-129]} {Celegans: WBGene00008400, drh-3, Dicer Related Helicase, [Score=82.8, Expect=2e-15]} {Smed: dd_Smed_v6_11718_0_1, dd_Smed_v6_11718_0_1, [RH, Score=558, Expect=3e-173]} {RNA1509_30565} {RNA1310_6333} {RNA815_11797}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25667

392

8.16

Mlig455_008175, Mlig455_008214

Neo: Int S/G2/M

Age: Up-Down-Down

Region-enriched R5: 1.157/0.00596

FANCM

Mlig455_008175 {REF} {Length: 6581} {TRANSSPLICED} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=77.7]; Type III restriction enzyme, res subunit [PF04851.17, score=64.3]; DEAD/DEAH box helicase [PF00270.31, score=53.9]} {Human: ENSG00000187790, FANCM, FA complementation group M, [RH, Score=630, Expect=0.0]} {Mouse: ENSMUSG00000055884, Fancm, Fanconi anemia, complementation group M, [RH, Score=619, Expect=0.0]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [RH, Score=443, Expect=2e-129]} {Celegans: WBGene00008400, drh-3, Dicer Related Helicase, [Score=82.0, Expect=4e-15]} {Smed: dd_Smed_v6_11718_0_1, dd_Smed_v6_11718_0_1, [RH, Score=563, Expect=2e-174]} {RNA1509_23421} {RNA1310_6333} {RNA815_11797}

Mlig455_008214 {REF} {Length: 6352} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=77.6]; Type III restriction enzyme, res subunit [PF04851.17, score=64.4]; DEAD/DEAH box helicase [PF00270.31, score=54.1]} {Human: ENSG00000187790, FANCM, FA complementation group M, [RH, Score=623, Expect=0.0]} {Mouse: ENSMUSG00000055884, Fancm, Fanconi anemia, complementation group M, [RH, Score=616, Expect=0.0]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [RH, Score=441, Expect=5e-129]} {Celegans: WBGene00008400, drh-3, Dicer Related Helicase, [Score=82.8, Expect=2e-15]} {Smed: dd_Smed_v6_11718_0_1, dd_Smed_v6_11718_0_1, [RH, Score=558, Expect=3e-173]} {RNA1509_30565} {RNA1310_6333} {RNA815_11797}

Cumulative graph for MligTC455_25667

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.185	3.582	0.32493	0.97364
RegionR2	0.847	3.582	0.12363	0.43562
RegionR3	-0.06	3.582	0.89442	1.00000
RegionR4	0.029	3.582	0.95049	1.00000
RegionR5	1.157	3.582	0.00050	0.00596
RegionR6	0.783	3.582	0.05563	0.44286
RegionR7	-0.993	3.582	0.16199	0.74369
RegionR8	-0.579	3.582	0.49144	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.801	3.582	0.37877	1.00000
RegenerationR2	0.626	3.582	0.12659	0.54988
RegenerationR3	0.965	3.582	0.03781	0.34290
RegenerationR4	0.257	3.582	0.56418	0.89884
RegenerationR5	0.13	3.582	0.71450	0.95769
RegenerationR6	0.61	3.582	0.16657	0.49716
RegenerationBL	-0.45	3.582	0.61329	0.95787
RegenerationTP	1.131	3.582	0.15174	0.57633

Genes with expression patterns similar to MligTC455_25667

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25667	392	8.16	Mlig455_008175, Mlig455_008214	Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R5: 1.157/0.00596	FANCM	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008175 {REF} {Length: 6581} {TRANSSPLICED} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=77.7]; Type III restriction enzyme, res subunit [PF04851.17, score=64.3]; DEAD/DEAH box helicase [PF00270.31, score=53.9]} {Human: ENSG00000187790, FANCM, FA complementation group M, [RH, Score=630, Expect=0.0]} {Mouse: ENSMUSG00000055884, Fancm, Fanconi anemia, complementation group M, [RH, Score=619, Expect=0.0]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [RH, Score=443, Expect=2e-129]} {Celegans: WBGene00008400, drh-3, Dicer Related Helicase, [Score=82.0, Expect=4e-15]} {Smed: dd_Smed_v6_11718_0_1, dd_Smed_v6_11718_0_1, [RH, Score=563, Expect=2e-174]} {RNA1509_23421} {RNA1310_6333} {RNA815_11797} Mlig455_008214 {REF} {Length: 6352} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=77.6]; Type III restriction enzyme, res subunit [PF04851.17, score=64.4]; DEAD/DEAH box helicase [PF00270.31, score=54.1]} {Human: ENSG00000187790, FANCM, FA complementation group M, [RH, Score=623, Expect=0.0]} {Mouse: ENSMUSG00000055884, Fancm, Fanconi anemia, complementation group M, [RH, Score=616, Expect=0.0]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [RH, Score=441, Expect=5e-129]} {Celegans: WBGene00008400, drh-3, Dicer Related Helicase, [Score=82.8, Expect=2e-15]} {Smed: dd_Smed_v6_11718_0_1, dd_Smed_v6_11718_0_1, [RH, Score=558, Expect=3e-173]} {RNA1509_30565} {RNA1310_6333} {RNA815_11797}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts