TomoSeq data search

Data search

Results for MligTC455_25674

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25674

1428

29.75

Mlig455_000231

Neo: Int S/G2/M

Age: -

PUS1

Mlig455_000231 {REF} {Length: 2482} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=47.6]} {Human: ENSG00000177192, PUS1, pseudouridylate synthase 1, [Score=209, Expect=6e-64]} {Mouse: ENSMUSG00000029507, Pus1, pseudouridine synthase 1, [Score=209, Expect=5e-64]} {Dmel: FBgn0038811, PUS1, pseudouridylate synthase 1, [Score=204, Expect=3e-62]} {Celegans: WBGene00004248, pus-1, tRNA pseudouridine synthase, [Score=183, Expect=5e-54]} {Smed: dd_Smed_v6_7557_0_1, dd_Smed_v6_7557_0_1, [Score=235, Expect=1e-74]} {RNA1509_36652} {RNA1310_11912, RNA1509_36652} {RNA1509_36652, RNA815_6183.1}

Cumulative graph for MligTC455_25674

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.947	5.146	0.16769	0.79209
RegionR2	0.406	5.146	0.29945	0.68834
RegionR3	-0.162	5.146	0.59953	1.00000
RegionR4	0.35	5.146	0.35155	0.67332
RegionR5	0.059	5.146	0.83520	1.00000
RegionR6	-0.18	5.146	0.56649	1.00000
RegionR7	-0.487	5.146	0.21083	0.82522
RegionR8	-0.932	5.146	0.04958	0.43720

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.908	5.146	0.16424	0.90662
RegenerationR2	-0.276	5.146	0.44064	0.84026
RegenerationR3	0.346	5.146	0.38319	0.79180
RegenerationR4	0.241	5.146	0.54612	0.89074
RegenerationR5	0.448	5.146	0.22405	0.65825
RegenerationR6	0.541	5.146	0.16588	0.49638
RegenerationBL	0.133	5.146	0.78292	1.00000
RegenerationTP	0.102	5.146	0.84286	1.00000

Genes with expression patterns similar to MligTC455_25674

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25674	1428	29.75	Mlig455_000231	Neo: Int S/G2/M Age: -	PUS1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_000231 {REF} {Length: 2482} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=47.6]} {Human: ENSG00000177192, PUS1, pseudouridylate synthase 1, [Score=209, Expect=6e-64]} {Mouse: ENSMUSG00000029507, Pus1, pseudouridine synthase 1, [Score=209, Expect=5e-64]} {Dmel: FBgn0038811, PUS1, pseudouridylate synthase 1, [Score=204, Expect=3e-62]} {Celegans: WBGene00004248, pus-1, tRNA pseudouridine synthase, [Score=183, Expect=5e-54]} {Smed: dd_Smed_v6_7557_0_1, dd_Smed_v6_7557_0_1, [Score=235, Expect=1e-74]} {RNA1509_36652} {RNA1310_11912, RNA1509_36652} {RNA1509_36652, RNA815_6183.1}
2.	MligTC455_19915	328	6.84	Mlig455_018044	Neo: Int S/G2/M Age: -	KLHL13	0.961	-	-	0.961	-	-	-	Mlig455_018044 {REF} {Length: 3003} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=106.5]; BTB/POZ domain [PF00651.33, score=96.6]; Kelch motif [PF13964.8, score=82.4]; Galactose oxidase, central domain [PF13415.8, score=60.5]; BTB And C-terminal Kelch [PF07707.17, score=42.6]; Galactose oxidase, central domain [PF13418.8, score=40.8]; Kelch motif [PF13854.8, score=39.6]; Kelch motif [PF07646.17, score=32.8]} {Human: ENSG00000003096, KLHL13, kelch like family member 13, [RH, Score=310, Expect=7e-96]; ENSG00000198642, KLHL9, kelch like family member 9, [RH, Score=308, Expect=1e-95]; ENSG00000167487, KLHL26, kelch like family member 26, [RH, Score=301, Expect=1e-92]} {Mouse: ENSMUSG00000070923, Klhl9, kelch-like 9, [RH, Score=311, Expect=9e-97]; ENSMUSG00000036782, Klhl13, kelch-like 13, [RH, Score=306, Expect=3e-95]} {Dmel: FBgn0037978, KLHL18, Kelch like family member 18, [Score=156, Expect=3e-40]} {Celegans: WBGene00020030, R12E2.1, [Score=167, Expect=4e-44]} {Smed: dd_Smed_v6_6164_0_1, dd_Smed_v6_6164_0_1, [Score=138, Expect=3e-34]} {RNA1509_15361} {RNA1310_4853.1, RNA1509_15361} {RNA1509_15361, RNA815_5001}
3.	MligTC455_13200	367	7.65	Mlig455_010092	Neo: - Age: Up-Down-Up		0.959	-	-	-	0.959	-	-	Mlig455_010092 {REF} {Length: 2206} {TRANSSPLICED} {Dmel: FBgn0032170, CG4658, [RH, Score=60.5, Expect=2e-09]} {Celegans: WBGene00021442, Y39A3CL.4, [RH, Score=63.2, Expect=1e-10]} {Smed: dd_Smed_v6_7080_0_1, dd_Smed_v6_7080_0_1, [RH, Score=102, Expect=2e-23]} {RNA1509_32591, RNA1509_39521, RNA1509_59196} {RNA1310_19032, RNA1509_32591, RNA1509_39521, RNA1509_59196} {RNA1509_32591, RNA1509_39521, RNA1509_59196, RNA815_22127}
4.	MligTC455_18749	1246	25.96	Mlig455_001711	Neo: - Age: Down-Up-Down	WASF2	0.958	-	-	-	-	0.958	-	Mlig455_001711 {REF} {Length: 4388} {TRANSSPLICED} {Pfam: WH2 motif [PF02205.22, score=20.1]} {Human: ENSG00000158195, WASF2, WAS protein family member 2, [Score=81.6, Expect=7e-16]} {Mouse: ENSMUSG00000028868, Wasf2, WAS protein family, member 2, [Score=74.7, Expect=8e-14]} {Celegans: WBGene00006958, wve-1, WAVE (Actin cytoskeleton modulator) homolog, [Score=58.2, Expect=8e-09]} {Smed: dd_Smed_v6_3189_0_1, dd_Smed_v6_3189_0_1, [Score=68.9, Expect=2e-12]} {RNA1509_12864} {RNA1310_29646} {RNA815_12255}
5.	MligTC455_37271	2658	55.38	Mlig455_039838	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_039838 {REF} {Length: 2746} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=84.8]} {Smed: dd_Smed_v6_3502_0_1, dd_Smed_v6_3502_0_1, [Score=104, Expect=5e-29]} {RNA1509_31437, RNA1509_4594} {RNA1310_26155.1, RNA1509_31437, RNA1509_4594} {RNA1509_31437, RNA1509_4594, RNA815_19847}
6.	MligTC455_53666	1759	36.64	Mlig455_040811	Neo: - Age: -	ACAT1	0.951	-	-	-	0.951	-	-	Mlig455_040811 {REF} {Length: 4843} {TRANSSPLICED} {Pfam: Mpp10 protein [PF04006.14, score=422.2]; Thiolase, N-terminal domain [PF00108.25, score=320.7]; Thiolase, C-terminal domain [PF02803.20, score=134.6]; Family of unknown function (DUF5447) [PF17525.4, score=28.0]; Beta-ketoacyl synthase, N-terminal domain [PF00109.28, score=21.5]} {Human: ENSG00000075239, ACAT1, acetyl-CoA acetyltransferase 1, [RH, Score=408, Expect=2e-129]} {Mouse: ENSMUSG00000032047, Acat1, acetyl-Coenzyme A acetyltransferase 1, [RH, Score=407, Expect=4e-129]} {Dmel: FBgn0029969, CG10932, [RH, Score=434, Expect=2e-139]} {Celegans: WBGene00002183, kat-1, Acetyl-CoA acetyltransferase homolog, mitochondrial, [RH, Score=432, Expect=5e-139]} {Smed: dd_Smed_v6_1377_0_1, dd_Smed_v6_1377_0_1, [RH, Score=452, Expect=2e-146]} {RNA1509_7248} {RNA1310_18235, RNA1509_7248} {RNA1509_7248, RNA815_10304}
7.	MligTC455_48442	1738	36.21	Mlig455_043373, Mlig455_066311	Neo: - Age: - Region-enriched R4: 1.139/0.00171	KLHL5	0.95	-	-	0.950	-	-	-	Mlig455_043373 {REF} {Length: 2975} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=185.7]; Kelch motif [PF13964.8, score=105.7]; BTB And C-terminal Kelch [PF07707.17, score=95.9]; BTB/POZ domain [PF00651.33, score=79.8]; Kelch motif [PF07646.17, score=58.1]; Galactose oxidase, central domain [PF13418.8, score=47.5]; Galactose oxidase, central domain [PF13415.8, score=33.7]} {Human: ENSG00000109790, KLHL5, kelch like family member 5, [RH, Score=519, Expect=8e-179]} {Mouse: ENSMUSG00000054920, Klhl5, kelch-like 5, [RH, Score=523, Expect=2e-180]; ENSMUSG00000025597, Klhl4, kelch-like 4, [RH, Score=500, Expect=2e-169]} {Dmel: FBgn0030114, CG17754, [RH, Score=475, Expect=4e-161]} {Celegans: WBGene00020030, R12E2.1, [Score=298, Expect=6e-93]} {Smed: dd_Smed_v6_5640_0_1, dd_Smed_v6_5640_0_1, [Score=311, Expect=1e-97]} {RNA1509_9473} {RNA1310_5518} {RNA815_3310} Mlig455_066311 {REF} {Length: 5534} {Pfam: Kelch motif [PF01344.27, score=183.5]; Kelch motif [PF13964.8, score=105.1]; BTB And C-terminal Kelch [PF07707.17, score=95.6]; BTB/POZ domain [PF00651.33, score=79.5]; Kelch motif [PF07646.17, score=55.2]; Galactose oxidase, central domain [PF13418.8, score=46.8]; Galactose oxidase, central domain [PF13415.8, score=33.9]} {Human: ENSG00000109790, KLHL5, kelch like family member 5, [RH, Score=520, Expect=4e-177]} {Mouse: ENSMUSG00000054920, Klhl5, kelch-like 5, [RH, Score=525, Expect=4e-179]; ENSMUSG00000025597, Klhl4, kelch-like 4, [RH, Score=503, Expect=2e-168]} {Dmel: FBgn0030114, CG17754, [RH, Score=478, Expect=1e-159]} {Celegans: WBGene00020030, R12E2.1, [Score=298, Expect=2e-91]} {Smed: dd_Smed_v6_5640_0_1, dd_Smed_v6_5640_0_1, [Score=313, Expect=9e-97]} {RNA1509_9473} {RNA1310_4396} {RNA815_3310}

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