TomoSeq data search

Data search

Results for MligTC455_25698

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25698

47

0.98

Mlig455_004696, Mlig455_009453

Neo: -

Age: -

Mlig455_004696 {REF} {Length: 1524} {NoTransDecoderORF} {RNA1310_41111} {RNA815_38187}

Mlig455_009453 {REF} {Length: 1778} {NoTransDecoderORF} {RNA1310_41111} {RNA815_38187}

Cumulative graph for MligTC455_25698

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	2.303	1.139	1.00000	1.00000
RegionR2	1.855	1.139	0.99986	1.00000
RegionR3	-0.542	1.139	1.00000	1.00000
RegionR4	-0.315	1.139	1.00000	1.00000
RegionR5	-1.649	1.139	0.99990	1.00000
RegionR6	-0.819	1.139	0.99997	1.00000
RegionR7	-0.439	1.139	0.99997	1.00000
RegionR8	-0.393	1.139	0.99995	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	6.099	1.139	0.99993	1.00000
RegenerationR2	4.113	1.139	0.06447	0.41603
RegenerationR3	9.067	1.139	1.00000	1.00000
RegenerationR4	8.159	1.139	1.00000	1.00000
RegenerationR5	8.553	1.139	0.99970	1.00000
RegenerationR6	5.845	1.139	1.00000	1.00000
RegenerationBL	6.62	1.139	0.99991	1.00000
RegenerationTP	6.482	1.139	0.99991	1.00000

Genes with expression patterns similar to MligTC455_25698

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25698	47	0.98	Mlig455_004696, Mlig455_009453	Neo: - Age: -		1	-	-	-	-	-	1.000	Mlig455_004696 {REF} {Length: 1524} {NoTransDecoderORF} {RNA1310_41111} {RNA815_38187} Mlig455_009453 {REF} {Length: 1778} {NoTransDecoderORF} {RNA1310_41111} {RNA815_38187}
2.	MligTC455_49215	268	5.59	Mlig455_001153	Neo: - Age: Up-Down-Up	MAN2B1	0.975	-	-	-	-	-	0.975	Mlig455_001153 {REF} {Length: 3554} {Pfam: Glycosyl hydrolases family 38 N-terminal domain [PF01074.24, score=284.0]; Glycosyl hydrolases family 38 C-terminal domain [PF07748.15, score=88.7]; Alpha mannosidase middle domain [PF09261.13, score=64.7]; Glycosyl hydrolases family 38 C-terminal beta sandwich domain [PF17677.3, score=27.8]} {Human: ENSG00000104774, MAN2B1, mannosidase alpha class 2B member 1, [RH, Score=713, Expect=0.0]} {Mouse: ENSMUSG00000005142, Man2b1, mannosidase 2, alpha B1, [RH, Score=687, Expect=0.0]} {Dmel: FBgn0027611, LManII, Lysosomal alpha-mannosidase II, [RH, Score=697, Expect=0.0]} {Celegans: WBGene00018877, aman-1, Alpha-mannosidase, [RH, Score=526, Expect=2e-171]} {Smed: dd_Smed_v6_1942_0_1, dd_Smed_v6_1942_0_1, [RH, Score=705, Expect=0.0]} {RNA1509_584} {RNA1310_3642} {RNA815_805.1}
3.	MligTC455_27337	234	4.88	Mlig455_037579	Neo: - Age: - Region-enriched R3: 2.828/0.01226	CLCA1	0.971	-	-	-	-	-	0.971	Mlig455_037579 {REF} {Length: 4567} {Pfam: Calcium-activated chloride channel N terminal [PF08434.13, score=200.1]; von Willebrand factor type A domain [PF00092.30, score=54.9]; von Willebrand factor type A domain [PF13519.8, score=40.4]; von Willebrand factor type A domain [PF13768.8, score=27.7]; VWA domain containing CoxE-like protein [PF05762.16, score=26.5]} {Human: ENSG00000016490, CLCA1, chloride channel accessory 1, [Score=251, Expect=2e-69]} {Mouse: ENSMUSG00000056025, Clca3a1, chloride channel accessory 3A1, [Score=250, Expect=1e-69]; ENSMUSG00000028262, Clca3a2, chloride channel accessory 3A2, [Score=248, Expect=1e-68]; ENSMUSG00000028255, Clca1, chloride channel accessory 1, [Score=248, Expect=1e-68]; ENSMUSG00000068547, Clca4a, chloride channel accessory 4A, [Score=240, Expect=6e-66]; ENSMUSG00000074195, Clca4b, chloride channel accessory 4B, [Score=240, Expect=5e-66]; ENSMUSG00000037033, Clca3b, chloride channel accessory 3B, [Score=238, Expect=6e-65]} {Smed: dd_Smed_v6_968_0_1, dd_Smed_v6_968_0_1, [Score=161, Expect=1e-40]} {RNA1509_1957} {RNA1310_1149.2} {RNA815_989.1}
4.	MligTC455_17113	40	0.84	Mlig455_016491, Mlig455_046909	Neo: - Age: -		0.958	-	-	-	-	-	0.958	Mlig455_016491 {REF} {Length: 682} {NoTransDecoderORF} {RNA1310_141638} Mlig455_046909 {REF} {Length: 700} {NoTransDecoderORF} {RNA1310_141638}
5.	MligTC455_38076	351	7.3	Mlig455_038503, Mlig455_052250, Mlig455_052295	Neo: - Age: Down-Down-Up Region-enriched R4: 3.194/0.03208 Region-enriched R3: 2.786/0.03624		0.954	-	-	-	-	-	0.954	Mlig455_038503 {REF} {Length: 2297} {RNA1509_18000} {RNA1310_14098} {RNA815_2224.1} Mlig455_052250 {REF} {Length: 2585} {Pfam: Zona pellucida-like domain [PF00100.25, score=47.2]; Scavenger receptor cysteine-rich domain [PF00530.20, score=43.8]} {RNA1509_18000, RNA1509_39101, RNA1509_59160} {RNA1310_14098, RNA1509_18000, RNA1509_39101, RNA1509_59160} {RNA1509_18000, RNA1509_39101, RNA1509_59160, RNA815_2224.1} Mlig455_052295 {REF} {Length: 2314} {Pfam: Zona pellucida-like domain [PF00100.25, score=47.4]; Scavenger receptor cysteine-rich domain [PF00530.20, score=40.3]} {RNA1509_18000} {RNA1310_14098} {RNA815_2224.1}
6.	MligTC455_48763	227	4.72	Mlig455_023566	Neo: - Age: logFC(26M/2M)=-0.692 Region-enriched R4: 3.166/0.00991		0.952	-	-	-	-	-	0.952	Mlig455_023566 {REF} {Length: 2191} {RNA1310_31028} {RNA815_24861}
7.	MligTC455_48762	230	4.8	Mlig455_023526	Neo: - Age: - Region-enriched R4: 3.151/0.00536 Region-enriched R3: 2.647/0.02199 Region-enriched R5: 2.161/0.03844		0.95	-	-	-	-	-	0.950	Mlig455_023526 {REF} {Length: 2233} {RNA1310_25601.1} {RNA815_24861}
8.	MligTC455_49199	55	1.15	Mlig455_039472	Neo: - Age: -	ZSWIM7	0.95	-	-	-	-	-	0.950	Mlig455_039472 {REF} {Length: 1238} {TRANSSPLICED} {Human: ENSG00000214941, ZSWIM7, zinc finger SWIM-type containing 7, [RH, Score=79.3, Expect=1e-18]} {Mouse: ENSMUSG00000014243, Zswim7, zinc finger SWIM-type containing 7, [RH, Score=74.7, Expect=6e-17]} {RNA1310_11948.1} {RNA815_29151}

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