TomoSeq data search

Data search

Results for MligTC455_25764

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25764

133

2.78

Mlig455_016763

Neo: -

Age: -

Mlig455_016763 {REF} {Length: 1412} {RNA1310_96893} {RNA815_63169}

Cumulative graph for MligTC455_25764

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.707	2.211	1.00000	1.00000
RegionR2	1.024	2.211	0.41367	0.80674
RegionR3	0.164	2.211	0.66340	1.00000
RegionR4	2.976	2.211	0.05530	0.20647
RegionR5	1.846	2.211	0.15186	0.40645
RegionR6	1.072	2.211	0.37987	0.95967
RegionR7	-3.044	2.211	0.99971	1.00000
RegionR8	-2.332	2.211	0.99973	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.326	2.211	0.99996	1.00000
RegenerationR2	1.062	2.211	0.24509	0.69277
RegenerationR3	1.764	2.211	0.14012	0.56629
RegenerationR4	0.401	2.211	0.72556	0.96327
RegenerationR5	0.455	2.211	0.68645	0.94633
RegenerationR6	1.125	2.211	0.34661	0.69194
RegenerationBL	3.865	2.211	0.03391	0.20645
RegenerationTP	5.701	2.211	0.01011	0.17097

Genes with expression patterns similar to MligTC455_25764

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25764	133	2.78	Mlig455_016763	Neo: - Age: -		4	-	-	1.000	1.000	1.000	1.000	Mlig455_016763 {REF} {Length: 1412} {RNA1310_96893} {RNA815_63169}
2.	MligTC455_30517	80	1.67	Mlig455_021191, Mlig455_044532	Neo: - Age: -		2.708	-	-	-	0.898	0.837	0.973	Mlig455_021191 {REF} {Length: 6854} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=76.9]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=49.3]; Integrase core domain [PF00665.28, score=32.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.6]; Aspartyl protease [PF13650.8, score=19.6]} {Smed: dd_Smed_v6_15498_0_73, dd_Smed_v6_15498_0_73, [Score=66.6, Expect=3e-13]} {RNA1509_36985} {RNA1310_22561} {RNA815_2733.1} Mlig455_044532 {REF} {Length: 2138} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=67.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=46.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=45.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=23.7]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=74.3, Expect=3e-14]} {RNA1509_40740} {RNA1310_3586} {RNA815_920.1}
3.	MligTC455_28267	180	3.74	Mlig455_008230	Neo: - Age: -		2.504	-	-	0.829	-	0.713	0.962	Mlig455_008230 {REF} {Length: 912} {Pfam: Integrase core domain [PF00665.28, score=28.8]} {Smed: dd_Smed_v6_11155_0_6, dd_Smed_v6_11155_0_6, [Score=47.0, Expect=1e-06]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
4.	MligTC455_29088	121	2.52	Mlig455_018225, Mlig455_020848, Mlig455_062213	Neo: - Age: -		1.696	-	-	-	0.743	-	0.953	Mlig455_018225 {REF} {Length: 2763} {Pfam: Integrase core domain [PF00665.28, score=36.8]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=57.4, Expect=3e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1} Mlig455_020848 {REF} {Length: 204} {NoTransDecoderORF} {RNA1310_16838} {RNA815_16228} Mlig455_062213 {REF} {Length: 182} {NoTransDecoderORF} {RNA1310_16838} {RNA815_16228}
5.	MligTC455_47119	112	2.32	Mlig455_013730	Neo: - Age: -		0.985	-	-	-	-	-	0.985	Mlig455_013730 {REF} {Length: 1003} {NoTransDecoderORF} {RNA1509_12093, RNA1509_15071, RNA1509_18293} {RNA1310_48935, RNA1509_12093, RNA1509_15071, RNA1509_18293} {RNA1509_12093, RNA1509_15071, RNA1509_18293, RNA815_14565}

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