TomoSeq data search

Data search

Results for MligTC455_25796

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25796

198

4.12

Mlig455_015515

Neo: -

Age: -

Regeneration-upregulated R6: 3.298

Regeneration-enriched R6: 3.298

Mlig455_015515 {REF} {Length: 1967} {RNA1509_55292} {RNA1310_10852.1} {RNA815_9425}

Cumulative graph for MligTC455_25796

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.083	2.397	0.55221	1.00000
RegionR2	1.704	2.397	0.03021	0.19654
RegionR3	-1.206	2.397	0.14239	0.64282
RegionR4	-0.29	2.397	0.71258	0.99754
RegionR5	-0.996	2.397	0.14681	0.39722
RegionR6	-1.035	2.397	0.22563	0.80738
RegionR7	0.4	2.397	0.71907	1.00000
RegionR8	0.338	2.397	0.82290	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.702	2.397	0.36413	1.00000
RegenerationR2	0.198	2.397	0.72616	0.96435
RegenerationR3	2.287	2.397	0.00575	0.13641
RegenerationR4	0.804	2.397	0.24317	0.69120
RegenerationR5	1.025	2.397	0.14990	0.56787
RegenerationR6	3.298	2.397	0.00002	0.00302	Specific for R6: 3.298
RegenerationBL	0.182	2.397	0.87554	1.00000
RegenerationTP	0.777	2.397	0.47978	0.88784

Genes with expression patterns similar to MligTC455_25796

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25796	198	4.12	Mlig455_015515	Neo: - Age: - Regeneration-upregulated R6: 3.298 Regeneration-enriched R6: 3.298		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015515 {REF} {Length: 1967} {RNA1509_55292} {RNA1310_10852.1} {RNA815_9425}
2.	MligTC455_30799	302	6.29	Mlig455_025413, Mlig455_063631, Mlig455_070991	Neo: - Age: -		1.686	0.733	-	-	0.953	-	-	Mlig455_025413 {REF} {Length: 711} {Pfam: Phage integrase family [PF00589.24, score=22.6]} {RNA1509_11406} {RNA1310_35207} {RNA815_739} Mlig455_063631 {REF} {Length: 4381} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=44.9]; Reverse transcriptase thumb domain [PF06817.16, score=18.4]} {RNA1509_11406} {RNA1310_763.3} {RNA815_739} Mlig455_070991 {REF} {Length: 3992} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=42.3]; Reverse transcriptase thumb domain [PF06817.16, score=18.4]} {RNA1509_21706} {RNA1310_763.3} {RNA815_739}
3.	MligTC455_31082	93	1.93	Mlig455_020193	Neo: - Age: Up-Down-Up		1.675	0.711	0.964	-	-	-	-	Mlig455_020193 {REF} {Length: 1952} {RNA1509_54750} {RNA1310_22843} {RNA815_11564.1}
4.	MligTC455_51397	57	1.18	Mlig455_022928	Neo: - Age: Up-Down-Up		0.955	-	0.955	-	-	-	-	Mlig455_022928 {REF} {Length: 3800} {RNA1310_41611} {RNA815_45602}
5.	MligTC455_13158	98	2.04	Mlig455_040740	Neo: - Age: -		0.954	-	0.954	-	-	-	-	Mlig455_040740 {REF} {Length: 4314} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=24.4]; Ankyrin repeat [PF13606.8, score=22.7]; Ankyrin repeats (many copies) [PF13637.8, score=20.3]} {RNA1509_31563} {RNA1310_28745} {RNA815_14997}
6.	MligTC455_03058	57	1.18	Mlig455_063622	Neo: - Age: Down-Up-Down		0.953	-	0.953	-	-	-	-	Mlig455_063622 {REF} {Length: 2139} {Pfam: Lectin C-type domain [PF00059.23, score=30.0]} {Smed: dd_Smed_v6_32483_0_1, dd_Smed_v6_32483_0_1, [Score=58.5, Expect=2e-10]} {RNA1310_85243}
7.	MligTC455_21875	43	0.9	Mlig455_013360	Neo: - Age: - Region-enriched R2: 7.691/0.04273	GRIN3A	0.953	-	0.953	-	-	-	-	Mlig455_013360 {REF} {Length: 4564} {Pfam: Ligand-gated ion channel [PF00060.28, score=78.4]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=31.4]} {Human: ENSG00000198785, GRIN3A, glutamate ionotropic receptor NMDA type subunit 3A, [Score=194, Expect=8e-50]} {Mouse: ENSMUSG00000039579, Grin3a, glutamate receptor ionotropic, NMDA3A, [Score=196, Expect=2e-50]} {Dmel: FBgn0053513, Nmdar2, NMDA receptor 2, [Score=128, Expect=1e-29]} {Celegans: WBGene00003775, nmr-2, NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-2, [Score=132, Expect=1e-32]} {Smed: dd_Smed_v6_21610_0_1, dd_Smed_v6_21610_0_1, [RH, Score=354, Expect=6e-107]} {RNA1509_16776} {RNA1310_74406} {RNA815_54514}
8.	MligTC455_17922	122	2.54	Mlig455_053273	Neo: - Age: Down-Up-Down		0.952	-	0.952	-	-	-	-	Mlig455_053273 {REF} {Length: 2278} {RNA1509_28508} {RNA1310_1041.1} {RNA815_12016}
9.	MligTC455_19141	162	3.37	Mlig455_054393	Neo: Germline Age: Up-Down-Down		0.951	-	0.951	-	-	-	-	Mlig455_054393 {REF} {Length: 960} {NoTransDecoderORF} {RNA1509_4877} {RNA1310_68666} {RNA815_20064}
10.	MligTC455_23374	134	2.78	Mlig455_016409	Neo: - Age: -	CDC34	0.95	-	0.950	-	-	-	-	Mlig455_016409 {REF} {Length: 5157} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=154.3]} {Human: ENSG00000099804, CDC34, cell division cycle 34, [RH, Score=280, Expect=2e-95]; ENSG00000107341, UBE2R2, ubiquitin conjugating enzyme E2 R2, [RH, Score=277, Expect=4e-94]} {Mouse: ENSMUSG00000020307, Cdc34, cell division cycle 34, [RH, Score=279, Expect=6e-95]; ENSMUSG00000036241, Ube2r2, ubiquitin-conjugating enzyme E2R 2, [RH, Score=277, Expect=3e-94]; ENSMUSG00000020870, Cdc34b, cell division cycle 34B, [RH, Score=273, Expect=1e-92]} {Dmel: FBgn0036516, CG7656, [RH, Score=281, Expect=1e-94]} {Celegans: WBGene00006702, ubc-3, UBiquitin Conjugating enzyme, [RH, Score=264, Expect=3e-89]} {Smed: dd_Smed_v6_8367_0_1, dd_Smed_v6_8367_0_1, [RH, Score=259, Expect=3e-87]} {RNA1509_31608} {RNA1310_20391} {RNA815_14254}
11.	MligTC455_23716	142	2.96	Mlig455_046798	Neo: - Age: Down-Down-Down		0.95	-	-	-	0.950	-	-	Mlig455_046798 {REF} {Length: 1088} {RNA1509_35160} {RNA1310_48019} {RNA815_16808}

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