Data search
Results for MligTC455_25946
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25946 | 136 | 2.83 | Mlig455_002344 | Neo: - Age: - |
SNTG1 | Mlig455_002344 {REF} {Length: 6663} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=32.7]} {Human: ENSG00000147481, SNTG1, syntrophin gamma 1, [RH, Score=149, Expect=2e-38]} {Mouse: ENSMUSG00000025909, Sntg1, syntrophin, gamma 1, [RH, Score=143, Expect=1e-36]} {Dmel: FBgn0034135, Syn2, Syntrophin-like 2, [Score=171, Expect=1e-46]} {Celegans: WBGene00017866, stn-2, SynTrophiN, [Score=119, Expect=2e-28]} {Smed: dd_Smed_v6_14961_0_1, dd_Smed_v6_14961_0_1, [Score=70.9, Expect=9e-13]} {RNA1509_47711} {RNA1310_23114, RNA1509_47711} {RNA1509_47711, RNA815_3631} |
Cumulative graph for MligTC455_25946
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.039 | 2.34 | 0.28692 | 0.93886 | |
| RegionR2 | 1.254 | 2.34 | 0.21462 | 0.58055 | |
| RegionR3 | -0.098 | 2.34 | 0.88505 | 1.00000 | |
| RegionR4 | 0.26 | 2.34 | 0.74980 | 1.00000 | |
| RegionR5 | 0.365 | 2.34 | 0.67341 | 1.00000 | |
| RegionR6 | 0.51 | 2.34 | 0.59219 | 1.00000 | |
| RegionR7 | 1.092 | 2.34 | 0.33323 | 0.96821 | |
| RegionR8 | 1.655 | 2.34 | 0.18209 | 0.76782 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.259 | 2.34 | 0.99996 | 1.00000 | |
| RegenerationR2 | 0.183 | 2.34 | 0.72697 | 0.96463 | |
| RegenerationR3 | 0.949 | 2.34 | 0.15463 | 0.58500 | |
| RegenerationR4 | -0.155 | 2.34 | 0.81787 | 0.99274 | |
| RegenerationR5 | 0.075 | 2.34 | 0.89205 | 1.00000 | |
| RegenerationR6 | 0.184 | 2.34 | 0.78560 | 0.97025 | |
| RegenerationBL | -5.533 | 2.34 | 0.00877 | 0.09282 | |
| RegenerationTP | -0.328 | 2.34 | 0.71678 | 1.00000 |
Genes with expression patterns similar to MligTC455_25946
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25946 | 136 | 2.83 | Mlig455_002344 | Neo: - Age: - |
SNTG1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002344 {REF} {Length: 6663} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=32.7]} {Human: ENSG00000147481, SNTG1, syntrophin gamma 1, [RH, Score=149, Expect=2e-38]} {Mouse: ENSMUSG00000025909, Sntg1, syntrophin, gamma 1, [RH, Score=143, Expect=1e-36]} {Dmel: FBgn0034135, Syn2, Syntrophin-like 2, [Score=171, Expect=1e-46]} {Celegans: WBGene00017866, stn-2, SynTrophiN, [Score=119, Expect=2e-28]} {Smed: dd_Smed_v6_14961_0_1, dd_Smed_v6_14961_0_1, [Score=70.9, Expect=9e-13]} {RNA1509_47711} {RNA1310_23114, RNA1509_47711} {RNA1509_47711, RNA815_3631} |
| 2. | MligTC455_23234 | 347 | 7.22 | Mlig455_006721 | Neo: - Age: - |
0.973 | - | - | - | 0.973 | - | - | Mlig455_006721 {REF} {Length: 6078} {Smed: dd_Smed_v6_2802_0_1, dd_Smed_v6_2802_0_1, [RH, Score=584, Expect=0.0]} {RNA1509_1489, RNA1509_26881} {RNA1310_997.1, RNA1509_1489, RNA1509_26881} {RNA1509_1489, RNA1509_26881, RNA815_1017.1} | |
| 3. | MligTC455_42655 | 514 | 10.72 | Mlig455_004884 | Neo: - |
LMLN2 | 0.971 | - | - | - | 0.971 | - | - | Mlig455_004884 {REF} {Length: 3441} {Pfam: Leishmanolysin [PF01457.18, score=39.9]} {Human: ENSG00000283654, LMLN2, leishmanolysin like peptidase 2, [RH, Score=91.7, Expect=2e-18]} {Mouse: ENSMUSG00000114865, Gm29776, predicted gene, 29776, [RH, Score=87.8, Expect=2e-17]} {Dmel: FBgn0086359, Invadolysin, [Score=75.5, Expect=1e-13]} {Celegans: WBGene00012796, Y43F4A.1, Leishmanolysin-like peptidase, [Score=68.9, Expect=1e-11]} {Smed: dd_Smed_v6_9167_0_1, dd_Smed_v6_9167_0_1, [Score=76.3, Expect=4e-14]} {RNA1509_37538, RNA1509_53385} {RNA1310_4126, RNA1509_37538, RNA1509_53385} {RNA1509_37538, RNA1509_53385, RNA815_1195} |
| 4. | MligTC455_45721 | 1254 | 26.12 | Mlig455_040703, Mlig455_064572 | Neo: - Age: logFC(26M/2M)=-0.404 |
PTPDC1 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_040703 {REF} {Length: 2564} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=29.2]; Protein-tyrosine phosphatase [PF00102.29, score=28.9]; Cyclin-dependent kinase inhibitor 3 (CDKN3) [PF05706.14, score=18.4]} {Human: ENSG00000158079, PTPDC1, protein tyrosine phosphatase domain containing 1, [Score=223, Expect=9e-64]} {Mouse: ENSMUSG00000038042, Ptpdc1, protein tyrosine phosphatase domain containing 1, [Score=220, Expect=1e-62]} {Dmel: FBgn0031952, cdc14, cell division cycle 14, [Score=57.8, Expect=2e-08]} {Celegans: WBGene00020444, T12B3.1, [Score=162, Expect=7e-44]} {Smed: dd_Smed_v6_13749_0_1, dd_Smed_v6_13749_0_1, [Score=199, Expect=3e-57]} {RNA1509_19142, RNA1509_54918} {RNA1310_14761.1, RNA1509_54918} {RNA1509_54918, RNA815_14825} Mlig455_064572 {REF} {Length: 2822} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=29.2]; Protein-tyrosine phosphatase [PF00102.29, score=28.8]; Cyclin-dependent kinase inhibitor 3 (CDKN3) [PF05706.14, score=18.3]} {Human: ENSG00000158079, PTPDC1, protein tyrosine phosphatase domain containing 1, [Score=223, Expect=2e-63]} {Mouse: ENSMUSG00000038042, Ptpdc1, protein tyrosine phosphatase domain containing 1, [Score=219, Expect=2e-62]} {Dmel: FBgn0031952, cdc14, cell division cycle 14, [Score=57.8, Expect=2e-08]} {Celegans: WBGene00020444, T12B3.1, [Score=162, Expect=6e-44]} {Smed: dd_Smed_v6_13749_0_1, dd_Smed_v6_13749_0_1, [Score=199, Expect=3e-57]} {RNA1509_19142} {RNA1310_14761.1, RNA1509_19142} {RNA1509_19142, RNA815_14825} |
| 5. | MligTC455_19958 | 380 | 7.92 | Mlig455_014312 | Neo: - |
PHYHD1 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_014312 {REF} {Length: 528} {Pfam: Phytanoyl-CoA dioxygenase (PhyH) [PF05721.15, score=179.8]} {Human: ENSG00000175287, PHYHD1, phytanoyl-CoA dioxygenase domain containing 1, [RH, Score=237, Expect=1e-76]} {Mouse: ENSMUSG00000079484, Phyhd1, phytanoyl-CoA dioxygenase domain containing 1, [RH, Score=229, Expect=1e-73]} {Dmel: FBgn0037819, CG14688, [RH, Score=206, Expect=4e-65]} {Celegans: WBGene00013650, Y105C5B.9, Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog, [RH, Score=217, Expect=3e-69]} {Smed: dd_Smed_v6_8029_0_1, dd_Smed_v6_8029_0_1, [RH, Score=247, Expect=5e-81]} {RNA1509_42101} {RNA1310_40002} {RNA815_12227} |
| 6. | MligTC455_24914 | 779 | 16.22 | Mlig455_032658 | Neo: - Age: Up-Down-Up |
HECTD1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_032658 {REF} {Length: 7397} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=218.1]; Basic tilted helix bundle domain [PF18410.3, score=41.8]; Mib_herc2 [PF06701.15, score=33.7]; Sad1 / UNC-like C-terminal [PF07738.15, score=26.0]} {Human: ENSG00000092148, HECTD1, HECT domain E3 ubiquitin protein ligase 1, [RH, Score=568, Expect=0.0]} {Mouse: ENSMUSG00000035247, Hectd1, HECT domain E3 ubiquitin protein ligase 1, [Score=572, Expect=4e-171]} {Dmel: FBgn0032208, Ufd4, Ubiquitin fusion-degradation 4-like, [RH, Score=437, Expect=5e-126]} {Celegans: WBGene00016405, hecd-1, HECtD1 ubiquitin ligase homolog, [RH, Score=419, Expect=3e-120]} {Smed: dd_Smed_v6_2824_0_1, dd_Smed_v6_2824_0_1, [Score=400, Expect=4e-114]} {RNA1509_31203, RNA1509_37314, RNA1509_48176, RNA1509_52878, RNA1509_58132, RNA1509_8379} {RNA1310_217, RNA1509_31203, RNA1509_37314, RNA1509_48176, RNA1509_52878, RNA1509_58132, RNA1509_8379} {RNA1509_31203, RNA1509_37314, RNA1509_48176, RNA1509_52878, RNA1509_58132, RNA1509_8379, RNA815_1993.1} |
| 7. | MligTC455_29200 | 404 | 8.42 | Mlig455_016456 | Neo: - Age: - |
OTOF | 0.956 | - | - | - | 0.956 | - | - | Mlig455_016456 {REF} {Length: 7086} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=232.5]; Ferlin C-terminus [PF16165.7, score=97.7]; FerB (NUC096) domain [PF08150.14, score=96.8]; FerI (NUC094) domain [PF08151.14, score=61.5]} {Human: ENSG00000115155, OTOF, otoferlin, [RH, Score=921, Expect=0.0]} {Mouse: ENSMUSG00000062372, Otof, otoferlin, [RH, Score=925, Expect=0.0]} {Dmel: FBgn0266757, mfr, misfire, [Score=308, Expect=5e-90]} {Celegans: WBGene00001414, fer-1, Sperm vesicle fusion protein fer-1, [Score=151, Expect=5e-36]} {Smed: dd_Smed_v6_5915_0_1, dd_Smed_v6_5915_0_1, [Score=1470, Expect=0.0]} {RNA1509_51560} {RNA1310_1416.6} {RNA815_411.1} |
| 8. | MligTC455_29202 | 397 | 8.26 | Mlig455_016520 | Neo: - Age: Up-Down-Up |
OTOF | 0.956 | - | - | - | 0.956 | - | - | Mlig455_016520 {REF} {Length: 3035} {Pfam: C2 domain [PF00168.32, score=46.4]} {Human: ENSG00000115155, OTOF, otoferlin, [Score=310, Expect=3e-90]} {Mouse: ENSMUSG00000062372, Otof, otoferlin, [Score=302, Expect=6e-88]} {Dmel: FBgn0266757, mfr, misfire, [Score=131, Expect=1e-31]} {Celegans: WBGene00001414, fer-1, Sperm vesicle fusion protein fer-1, [Score=73.6, Expect=4e-13]} {Smed: dd_Smed_v6_5915_0_1, dd_Smed_v6_5915_0_1, [Score=452, Expect=6e-140]} {RNA1509_5256} {RNA1310_1035} {RNA815_411.1} |
| 9. | MligTC455_29594 | 106 | 2.21 | Mlig455_031563 | Neo: - Age: - |
MAP3K1 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_031563 {REF} {Length: 7816} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=215.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=138.1]; Ring finger domain [PF13639.8, score=34.5]; Fungal protein kinase [PF17667.3, score=24.1]; PHD-finger [PF00628.31, score=22.0]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=19.9]} {Human: ENSG00000095015, MAP3K1, mitogen-activated protein kinase kinase kinase 1, [RH, Score=372, Expect=6e-107]} {Mouse: ENSMUSG00000021754, Map3k1, mitogen-activated protein kinase kinase kinase 1, [RH, Score=371, Expect=1e-106]} {Dmel: FBgn0014006, Ask1, Apoptotic signal-regulating kinase 1, [Score=183, Expect=3e-46]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=179, Expect=5e-45]} {Smed: dd_Smed_v6_5198_0_1, dd_Smed_v6_5198_0_1, [RH, Score=301, Expect=1e-84]} {RNA1509_11218} {RNA1310_1802.1} {RNA815_10176} |
Berezikov Lab - 2020-2021 © ERIBA