TomoSeq data search

Data search

Results for MligTC455_25979

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25979

109

2.26

Mlig455_006713

Neo: -

Age: -

SCARB2

Mlig455_006713 {REF} {Length: 4043} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=449.8]} {Human: ENSG00000138760, SCARB2, scavenger receptor class B member 2, [RH, Score=290, Expect=5e-91]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [RH, Score=290, Expect=2e-91]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [RH, Score=233, Expect=5e-69]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [RH, Score=179, Expect=4e-49]} {Smed: dd_Smed_v6_2951_0_1, dd_Smed_v6_2951_0_1, [RH, Score=327, Expect=2e-105]} {RNA1509_36506, RNA1509_57036} {RNA1310_14028, RNA1509_36506, RNA1509_57036} {RNA1509_36506, RNA1509_57036, RNA815_16190}

Cumulative graph for MligTC455_25979

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.653	2.065	0.23866	0.88444
RegionR2	1.941	2.065	0.14496	0.47457
RegionR3	0.252	2.065	0.76704	1.00000
RegionR4	-0.144	2.065	0.90577	1.00000
RegionR5	1.376	2.065	0.14619	0.39620
RegionR6	1.078	2.065	0.35458	0.93918
RegionR7	0.659	2.065	0.62181	1.00000
RegionR8	0.491	2.065	0.72847	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.34	2.065	0.99981	1.00000
RegenerationR2	1.586	2.065	0.04427	0.34771
RegenerationR3	1.578	2.065	0.11914	0.53698
RegenerationR4	1.171	2.065	0.26109	0.70871
RegenerationR5	0.937	2.065	0.25156	0.68488
RegenerationR6	2.331	2.065	0.01074	0.12820
RegenerationBL	1.302	2.065	0.31169	0.67727
RegenerationTP	1.362	2.065	0.30812	0.75288

Genes with expression patterns similar to MligTC455_25979

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25979	109	2.26	Mlig455_006713	Neo: - Age: -	SCARB2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_006713 {REF} {Length: 4043} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=449.8]} {Human: ENSG00000138760, SCARB2, scavenger receptor class B member 2, [RH, Score=290, Expect=5e-91]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [RH, Score=290, Expect=2e-91]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [RH, Score=233, Expect=5e-69]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [RH, Score=179, Expect=4e-49]} {Smed: dd_Smed_v6_2951_0_1, dd_Smed_v6_2951_0_1, [RH, Score=327, Expect=2e-105]} {RNA1509_36506, RNA1509_57036} {RNA1310_14028, RNA1509_36506, RNA1509_57036} {RNA1509_36506, RNA1509_57036, RNA815_16190}
2.	MligTC455_21979	40	0.83	Mlig455_009131	Neo: - Age: -	MYO7A	0.982	-	-	0.982	-	-	-	Mlig455_009131 {REF} {Length: 3414} {Pfam: Myosin head (motor domain) [PF00063.23, score=170.0]; AAA ATPase domain [PF13191.8, score=27.3]} {Human: ENSG00000137474, MYO7A, myosin VIIA, [Score=142, Expect=6e-34]} {Mouse: ENSMUSG00000030761, Myo7a, myosin VIIA, [Score=142, Expect=6e-34]} {Dmel: FBgn0262029, d, dachs, [RH, Score=313, Expect=4e-91]} {Celegans: WBGene00002035, hum-1, Heavy chain, Unconventional Myosin, [Score=108, Expect=6e-24]} {Smed: dd_Smed_v6_1626_0_1, dd_Smed_v6_1626_0_1, [Score=107, Expect=2e-23]} {RNA1310_35056} {RNA815_23681}
3.	MligTC455_30712	53	1.1	Mlig455_055428	Neo: - Age: Up-Down-Up		0.975	-	-	0.975	-	-	-	Mlig455_055428 {REF} {Length: 3663} {TRANSSPLICED} {RNA1509_31175} {RNA1310_7952} {RNA815_1590.1}
4.	MligTC455_22843	35	0.73	Mlig455_047583, Mlig455_069702	Neo: - Age: Up-Down-Down		0.967	-	-	0.967	-	-	-	Mlig455_047583 {REF} {Length: 1867} {Pfam: Lectin C-type domain [PF00059.23, score=31.2]} {RNA1310_65565} {RNA815_34849} Mlig455_069702 {REF} {Length: 2065} {Pfam: Lectin C-type domain [PF00059.23, score=24.8]} {RNA1310_70487} {RNA815_34849}
5.	MligTC455_03110	58	1.2	Mlig455_069260	Neo: - Age: -	GABBR2	0.966	-	-	0.966	-	-	-	Mlig455_069260 {REF} {Length: 6190} {TRANSSPLICED} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=150.8]; Receptor family ligand binding region [PF01094.30, score=121.6]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=259, Expect=1e-73]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=255, Expect=2e-72]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=238, Expect=4e-66]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=223, Expect=8e-62]} {Smed: dd_Smed_v6_59890_0_1, dd_Smed_v6_59890_0_1, [Score=112, Expect=1e-28]} {RNA1509_59815} {RNA1310_19655} {RNA815_19308}
6.	MligTC455_23145	43	0.91	Mlig455_014752	Neo: - Age: logFC(26M/2M)=-0.605	AC243734.1	0.966	-	-	0.966	-	-	-	Mlig455_014752 {REF} {Length: 3129} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=213.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=186.0]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=425, Expect=1e-143]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=425, Expect=1e-143]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=421, Expect=4e-142]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [RH, Score=429, Expect=1e-145]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [RH, Score=491, Expect=7e-166]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [RH, Score=402, Expect=5e-135]} {Smed: dd_Smed_v6_18184_0_1, dd_Smed_v6_18184_0_1, [RH, Score=486, Expect=1e-167]} {RNA1310_22414.1} {RNA815_34255}
7.	MligTC455_40282	205	4.27	Mlig455_049955	Neo: - Age: Down-Up-Down	SLC22A5	0.965	-	-	0.965	-	-	-	Mlig455_049955 {REF} {Length: 2196} {Pfam: Sugar (and other) transporter [PF00083.26, score=75.6]; Major Facilitator Superfamily [PF07690.18, score=56.2]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=164, Expect=2e-43]; ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=157, Expect=4e-41]} {Mouse: ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=171, Expect=5e-46]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=168, Expect=4e-45]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=150, Expect=8e-39]} {Smed: dd_Smed_v6_10903_0_1, dd_Smed_v6_10903_0_1, [Score=155, Expect=4e-41]} {RNA1509_15842} {RNA1310_13367.1} {RNA815_6488}
8.	MligTC455_35739	91	1.9	Mlig455_050779	Neo: - Age: Up-Down-Down	ADGRL2	0.96	-	-	0.960	-	-	-	Mlig455_050779 {REF} {Length: 4277} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=110.1]; Pentaxin family [PF00354.19, score=43.4]; Hormone receptor domain [PF02793.24, score=35.9]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=33.0]; GPCR-Autoproteolysis INducing (GAIN) domain [PF16489.7, score=20.5]; Myc amino-terminal region [PF01056.20, score=18.8]} {Human: ENSG00000117114, ADGRL2, adhesion G protein-coupled receptor L2, [RH, Score=140, Expect=5e-33]; ENSG00000072071, ADGRL1, adhesion G protein-coupled receptor L1, [RH, Score=139, Expect=2e-32]; ENSG00000150471, ADGRL3, adhesion G protein-coupled receptor L3, [RH, Score=133, Expect=9e-31]} {Mouse: ENSMUSG00000028184, Adgrl2, adhesion G protein-coupled receptor L2, [RH, Score=142, Expect=1e-33]; ENSMUSG00000013033, Adgrl1, adhesion G protein-coupled receptor L1, [RH, Score=140, Expect=6e-33]} {Celegans: WBGene00002252, lat-2, Latrophilin-like protein LAT-2, [RH, Score=124, Expect=2e-28]} {Smed: dd_Smed_v6_16446_0_2, dd_Smed_v6_16446_0_2, [RH, Score=444, Expect=1e-139]} {RNA1509_25495} {RNA1310_3070} {RNA815_2153}
9.	MligTC455_20379	17	0.36	Mlig455_013410	Neo: - Age: - Region-enriched R2: 6.911/0.01361	PLSCR2	0.959	-	-	0.959	-	-	-	Mlig455_013410 {REF} {Length: 1971} {Pfam: Scramblase [PF03803.17, score=92.3]} {Human: ENSG00000163746, PLSCR2, phospholipid scramblase 2, [Score=77.8, Expect=2e-15]; ENSG00000114698, PLSCR4, phospholipid scramblase 4, [Score=77.0, Expect=5e-15]} {Mouse: ENSMUSG00000032369, Plscr1, phospholipid scramblase 1, [Score=84.3, Expect=1e-17]} {Celegans: WBGene00011935, scrm-1, Phospholipid scramblase, [Score=89.7, Expect=6e-20]} {RNA1310_32034} {RNA815_51815}
10.	MligTC455_48269	56	1.17	Mlig455_062018, Mlig455_067367	Neo: - Age: -		0.959	-	-	0.959	-	-	-	Mlig455_062018 {REF} {Length: 2100} {RNA1310_13886} {RNA815_37155} Mlig455_067367 {REF} {Length: 2213} {RNA1310_13886} {RNA815_37155}
11.	MligTC455_06646	23	0.47	Mlig455_052044	Neo: - Age: -		0.957	-	-	0.957	-	-	-	Mlig455_052044 {REF} {Length: 737}
12.	MligTC455_12248	18	0.37	Mlig455_029283	Neo: - Age: -	NMBR	0.957	-	-	0.957	-	-	-	Mlig455_029283 {REF} {Length: 3230} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=106.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=35.9]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=35.7]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.8]} {Human: ENSG00000135577, NMBR, neuromedin B receptor, [Score=123, Expect=2e-30]} {Mouse: ENSMUSG00000019865, Nmbr, neuromedin B receptor, [Score=120, Expect=1e-29]} {Dmel: FBgn0038880, SIFaR, SIFamide receptor, [Score=106, Expect=3e-24]} {Celegans: WBGene00009619, npr-6, NeuroPeptide Receptor family, [Score=77.8, Expect=3e-15]} {Smed: dd_Smed_v6_17567_0_1, dd_Smed_v6_17567_0_1, [Score=127, Expect=2e-32]} {RNA1310_66264}
13.	MligTC455_32523	45	0.93	Mlig455_057683	Neo: - Age: Down-Down-Up	NR2E1	0.957	-	-	0.957	-	-	-	Mlig455_057683 {REF} {Length: 3117} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=84.9]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=46.7]} {Human: ENSG00000112333, NR2E1, nuclear receptor subfamily 2 group E member 1, [RH, Score=201, Expect=4e-60]} {Mouse: ENSMUSG00000019803, Nr2e1, nuclear receptor subfamily 2, group E, member 1, [RH, Score=199, Expect=7e-60]} {Dmel: FBgn0003720, tll, tailless, [Score=165, Expect=2e-46]} {Celegans: WBGene00003657, nhr-67, Nuclear hormone receptor family member nhr-67, [Score=151, Expect=2e-41]} {Smed: dd_Smed_v6_21347_0_1, dd_Smed_v6_21347_0_1, [Score=152, Expect=3e-42]} {RNA1509_22720} {RNA1310_16022, RNA1509_22720} {RNA1509_22720, RNA815_25885}
14.	MligTC455_41874	41	0.85	Mlig455_052428	Neo: Int S/G2/M Age: Up-Down-Up	CBFB	0.956	-	-	0.956	-	-	-	Mlig455_052428 {REF} {Length: 2121} {Pfam: Core binding factor beta subunit [PF02312.19, score=118.4]} {Human: ENSG00000067955, CBFB, core-binding factor subunit beta, [Score=53.1, Expect=1e-07]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [RH, Score=96.7, Expect=3e-21]} {Dmel: FBgn0013755, Bro, Brother, [Score=60.1, Expect=4e-10]} {Celegans: WBGene00008559, F07H5.8, [Score=50.4, Expect=2e-06]} {Smed: dd_Smed_v6_2875_0_2, dd_Smed_v6_2875_0_2, [Score=57.8, Expect=1e-10]} {RNA1310_39433} {RNA815_32396}
15.	MligTC455_48410	155	3.23	Mlig455_001031	Neo: - Age: -		0.951	-	-	0.951	-	-	-	Mlig455_001031 {REF} {Length: 572} {NoTransDecoderORF}
16.	MligTC455_29081	43	0.9	Mlig455_033762	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_033762 {REF} {Length: 1438} {NoTransDecoderORF} {RNA1509_54569} {RNA1310_7225.1} {RNA815_27178}

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