TomoSeq data search

Data search

Results for MligTC455_26114

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26114

63

1.31

Mlig455_009679

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.632

Mlig455_009679 {REF} {Length: 5112} {TRANSSPLICED} {RNA1509_28486} {RNA1310_24343.1} {RNA815_8096}

Cumulative graph for MligTC455_26114

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.905	0.974	0.82620	1.00000
RegionR2	-0.607	0.974	0.97616	1.00000
RegionR3	0.265	0.974	0.49256	0.99013
RegionR4	0.548	0.974	0.57109	0.88922
RegionR5	-2.038	0.974	0.99851	1.00000
RegionR6	0.003	0.974	0.90123	1.00000
RegionR7	1.497	0.974	0.87748	1.00000
RegionR8	2.236	0.974	0.62295	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.531	0.974	0.99993	1.00000
RegenerationR2	1.325	0.974	0.22094	0.66839
RegenerationR3	0.262	0.974	0.48322	0.85209
RegenerationR4	-1.274	0.974	0.92693	1.00000
RegenerationR5	1.34	0.974	0.24828	0.68193
RegenerationR6	-1.366	0.974	0.62880	0.88589
RegenerationBL	-1.975	0.974	0.66188	0.99630
RegenerationTP	-4.721	0.974	0.37381	0.81096

Genes with expression patterns similar to MligTC455_26114

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26114	63	1.31	Mlig455_009679	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.632		3	1.000	1.000	-	-	-	1.000	Mlig455_009679 {REF} {Length: 5112} {TRANSSPLICED} {RNA1509_28486} {RNA1310_24343.1} {RNA815_8096}
2.	MligTC455_24501	17	0.35	Mlig455_019986	Neo: - Age: -		0.977	-	-	-	-	-	0.977	Mlig455_019986 {REF} {Length: 423} {RNA1509_55829}
3.	MligTC455_24999	23	0.47	Mlig455_016811	Neo: - Age: Up-Down-Up		0.963	-	-	-	-	-	0.963	Mlig455_016811 {REF} {Length: 4916} {Pfam: Receptor family ligand binding region [PF01094.30, score=68.5]} {RNA1509_21912} {RNA1310_5718} {RNA815_6955}
4.	MligTC455_09664	40	0.84	Mlig455_008164, Mlig455_008202, Mlig455_069585	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_008164 {REF} {Length: 176} {NoTransDecoderORF} Mlig455_008202 {REF} {Length: 1122} {NoTransDecoderORF} {RNA1509_8906} {RNA1310_1712.1} {RNA815_474.1} Mlig455_069585 {REF} {Length: 1108} {NoTransDecoderORF} {RNA1509_8906} {RNA1310_1712.1} {RNA815_474.1}
5.	MligTC455_52492	66	1.38	Mlig455_041983	Neo: - Age: - Region-enriched R2: 4.434/0.03756		0.958	-	-	-	-	-	0.958	Mlig455_041983 {REF} {Length: 1100} {RNA1509_31700, RNA1509_40092} {RNA1310_225.1, RNA1509_40092} {RNA1509_40092, RNA815_107.1}
6.	MligTC455_24671	92	1.91	Mlig455_014396	Neo: - Age: -	TRHR	0.956	0.956	-	-	-	-	-	Mlig455_014396 {REF} {Length: 1582} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=63.3]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=28.2]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.0]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=54.3, Expect=2e-07]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=53.1, Expect=3e-07]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=68.2, Expect=4e-12]} {Smed: dd_Smed_v6_24805_0_1, dd_Smed_v6_24805_0_1, [RH, Score=216, Expect=1e-66]} {RNA1310_20543} {RNA815_8393}
7.	MligTC455_46202	1182	24.63	Mlig455_015525	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.090 Region-enriched R7: 3.843/0.00000 Region-enriched R8: 2.862/0.00001 Regeneration-downregulated BL: -3.302 Regeneration-depleted BL: -3.302		0.954	0.954	-	-	-	-	-	Mlig455_015525 {REF} {Length: 2230} {RNA1509_26726, RNA1509_40578, RNA1509_41769, RNA1509_55570} {RNA1310_31635.1, RNA1509_26726, RNA1509_40578, RNA1509_41769, RNA1509_55570} {RNA1509_26726, RNA1509_40578, RNA1509_41769, RNA1509_55570, RNA815_27083.1}
8.	MligTC455_38298	574	11.96	Mlig455_011635	Neo: - Age: - Region-enriched R7: 3.443/0.00005 Region-enriched R8: 3.253/0.01101 Region-enriched R6: 2.400/0.00478 Regeneration-enriched R4: 4.627 Regeneration-enriched BL: 2.264		0.95	0.950	-	-	-	-	-	Mlig455_011635 {REF} {Length: 1207} {Pfam: Homeodomain [PF00046.31, score=24.6]} {Smed: dd_Smed_v6_20755_0_1, dd_Smed_v6_20755_0_1, [Score=43.5, Expect=1e-05]} {RNA1509_20207} {RNA1310_9296.1} {RNA815_10543}

Berezikov Lab - 2020-2021 © ERIBA