TomoSeq data search

Data search

Results for MligTC455_26119

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26119	897	18.69	Mlig455_009390, Mlig455_009397, Mlig455_036931	Neo: - Age: Up-Down-Up		Mlig455_009390 {REF} {Length: 1947} {RNA1509_28486} {RNA1310_21481} {RNA815_25874.1} Mlig455_009397 {REF} {Length: 2006} {RNA1509_28486} {RNA1310_21481} {RNA815_25874.1} Mlig455_036931 {REF} {Length: 1164} {RNA1509_28486} {RNA1310_21481} {RNA815_8096}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_26119

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.343	4.548	0.02266	0.40709
RegionR2	1.778	4.548	0.01472	0.12800
RegionR3	1.17	4.548	0.10630	0.56928
RegionR4	0.332	4.548	0.68618	0.97862
RegionR5	-0.329	4.548	0.93028	1.00000
RegionR6	1.674	4.548	0.00773	0.14332
RegionR7	1.315	4.548	0.10056	0.60555
RegionR8	1.402	4.548	0.12070	0.63955

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.114	4.548	0.99999	1.00000
RegenerationR2	0.186	4.548	0.67856	0.94853
RegenerationR3	0.982	4.548	0.04687	0.37704
RegenerationR4	1.13	4.548	0.02236	0.23889
RegenerationR5	1.348	4.548	0.00815	0.16394
RegenerationR6	0.187	4.548	0.70172	0.92519
RegenerationBL	-0.982	4.548	0.09729	0.36605
RegenerationTP	1.391	4.548	0.00713	0.14224

Genes with expression patterns similar to MligTC455_26119

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26119	897	18.69	Mlig455_009390, Mlig455_009397, Mlig455_036931	Neo: - Age: Up-Down-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_009390 {REF} {Length: 1947} {RNA1509_28486} {RNA1310_21481} {RNA815_25874.1} Mlig455_009397 {REF} {Length: 2006} {RNA1509_28486} {RNA1310_21481} {RNA815_25874.1} Mlig455_036931 {REF} {Length: 1164} {RNA1509_28486} {RNA1310_21481} {RNA815_8096}
2.	MligTC455_20180	518	10.78	Mlig455_009498	Neo: - Age: -	CPNE9	1.765	-	-	0.815	-	-	0.950	Mlig455_009498 {REF} {Length: 4301} {TRANSSPLICED} {Pfam: Copine [PF07002.18, score=236.5]; C2 domain [PF00168.32, score=52.0]; vWA found in TerF C terminus [PF10138.11, score=23.3]} {Human: ENSG00000144550, CPNE9, copine family member 9, [Score=426, Expect=9e-143]; ENSG00000139117, CPNE8, copine 8, [Score=419, Expect=4e-140]} {Mouse: ENSMUSG00000030270, Cpne9, copine family member IX, [Score=427, Expect=2e-143]; ENSMUSG00000052560, Cpne8, copine VIII, [Score=419, Expect=6e-140]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=300, Expect=2e-93]} {Smed: dd_Smed_v6_13873_0_1, dd_Smed_v6_13873_0_1, [RH, Score=570, Expect=0.0]} {RNA1509_22032, RNA1509_32945, RNA1509_37689} {RNA1310_13001, RNA1509_22032, RNA1509_32945, RNA1509_37689} {RNA1509_22032, RNA1509_32945, RNA1509_37689, RNA815_3969.1}
3.	MligTC455_30517	80	1.67	Mlig455_021191, Mlig455_044532	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_021191 {REF} {Length: 6854} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=76.9]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=49.3]; Integrase core domain [PF00665.28, score=32.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.6]; Aspartyl protease [PF13650.8, score=19.6]} {Smed: dd_Smed_v6_15498_0_73, dd_Smed_v6_15498_0_73, [Score=66.6, Expect=3e-13]} {RNA1509_36985} {RNA1310_22561} {RNA815_2733.1} Mlig455_044532 {REF} {Length: 2138} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=67.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=46.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=45.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=23.7]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=74.3, Expect=3e-14]} {RNA1509_40740} {RNA1310_3586} {RNA815_920.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_26119

897

18.69

Mlig455_009390, Mlig455_009397, Mlig455_036931

Neo: -

Age: Up-Down-Up

1.000

Mlig455_009390 {REF} {Length: 1947} {RNA1509_28486} {RNA1310_21481} {RNA815_25874.1}

Mlig455_009397 {REF} {Length: 2006} {RNA1509_28486} {RNA1310_21481} {RNA815_25874.1}

Mlig455_036931 {REF} {Length: 1164} {RNA1509_28486} {RNA1310_21481} {RNA815_8096}

MligTC455_20180

518

10.78

Mlig455_009498

Neo: -

Age: -

CPNE9

1.765

0.815

0.950

Mlig455_009498 {REF} {Length: 4301} {TRANSSPLICED} {Pfam: Copine [PF07002.18, score=236.5]; C2 domain [PF00168.32, score=52.0]; vWA found in TerF C terminus [PF10138.11, score=23.3]} {Human: ENSG00000144550, CPNE9, copine family member 9, [Score=426, Expect=9e-143]; ENSG00000139117, CPNE8, copine 8, [Score=419, Expect=4e-140]} {Mouse: ENSMUSG00000030270, Cpne9, copine family member IX, [Score=427, Expect=2e-143]; ENSMUSG00000052560, Cpne8, copine VIII, [Score=419, Expect=6e-140]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=300, Expect=2e-93]} {Smed: dd_Smed_v6_13873_0_1, dd_Smed_v6_13873_0_1, [RH, Score=570, Expect=0.0]} {RNA1509_22032, RNA1509_32945, RNA1509_37689} {RNA1310_13001, RNA1509_22032, RNA1509_32945, RNA1509_37689} {RNA1509_22032, RNA1509_32945, RNA1509_37689, RNA815_3969.1}

MligTC455_30517

1.67

Mlig455_021191, Mlig455_044532

Neo: -

Age: -

0.954

Mlig455_021191 {REF} {Length: 6854} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=76.9]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=49.3]; Integrase core domain [PF00665.28, score=32.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.6]; Aspartyl protease [PF13650.8, score=19.6]} {Smed: dd_Smed_v6_15498_0_73, dd_Smed_v6_15498_0_73, [Score=66.6, Expect=3e-13]} {RNA1509_36985} {RNA1310_22561} {RNA815_2733.1}

Mlig455_044532 {REF} {Length: 2138} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=67.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=46.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=45.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=23.7]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=74.3, Expect=3e-14]} {RNA1509_40740} {RNA1310_3586} {RNA815_920.1}