TomoSeq data search

Data search

Results for MligTC455_26132

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26132	25	0.53	Mlig455_042875	Neo: - Age: Up-Down-Down	PRR9	Mlig455_042875 {REF} {Length: 3207} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.2, Expect=6e-06]} {RNA1509_46710} {RNA1310_18270} {RNA815_15247.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_26132

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	2.609	0.889	0.99987	1.00000
RegionR2	-1.537	0.889	0.99872	1.00000
RegionR3	1.012	0.889	0.29753	0.83977
RegionR4	3.811	0.889	0.05747	0.21172
RegionR5	-0.816	0.889	0.79913	1.00000
RegionR6	-0.693	0.889	0.98291	1.00000
RegionR7	-4.248	0.889	1.00000	1.00000
RegionR8	-0.137	0.889	0.98256	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.156	0.889	0.99996	1.00000
RegenerationR2	1.746	0.889	0.19117	0.63493
RegenerationR3	-0.896	0.889	0.28928	0.72126
RegenerationR4	0.742	0.889	0.79173	0.98438
RegenerationR5	2.229	0.889	0.46965	0.84162
RegenerationR6	2.24	0.889	0.14618	0.46825
RegenerationBL	0.258	0.889	0.99985	1.00000
RegenerationTP	0.016	0.889	0.83722	1.00000

Genes with expression patterns similar to MligTC455_26132

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26132	25	0.53	Mlig455_042875	Neo: - Age: Up-Down-Down	PRR9	2	-	-	-	1.000	-	1.000	Mlig455_042875 {REF} {Length: 3207} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.2, Expect=6e-06]} {RNA1509_46710} {RNA1310_18270} {RNA815_15247.1}
2.	MligTC455_46035	228	4.74	Mlig455_009727	Neo: - Age: -	PCDH1	0.953	-	-	-	0.953	-	-	Mlig455_009727 {REF} {Length: 4658} {Pfam: Cadherin domain [PF00028.19, score=208.6]; Cadherin-like [PF16184.7, score=35.7]; Cadherin-like [PF08266.14, score=19.8]} {Human: ENSG00000156453, PCDH1, protocadherin 1, [Score=195, Expect=5e-50]; ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=192, Expect=8e-49]; ENSG00000253485, PCDHGA5, protocadherin gamma subfamily A, 5, [Score=192, Expect=2e-49]} {Mouse: ENSMUSG00000043458, Pcdhb12, protocadherin beta 12, [Score=197, Expect=1e-51]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=195, Expect=2e-50]; ENSMUSG00000044043, Pcdhb14, protocadherin beta 14, [Score=190, Expect=2e-49]; ENSMUSG00000102428, Pcdhga12, protocadherin gamma subfamily A, 12, [Score=189, Expect=7e-49]; ENSMUSG00000045876, Pcdhb8, protocadherin beta 8, [Score=188, Expect=6e-49]} {Dmel: FBgn0024836, stan, starry night, [Score=172, Expect=9e-43]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=125, Expect=1e-28]} {Smed: dd_Smed_v6_9106_0_1, dd_Smed_v6_9106_0_1, [Score=265, Expect=1e-73]} {RNA1509_29427} {RNA1310_8724} {RNA815_14837}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_26132

0.53

Mlig455_042875

Neo: -

Age: Up-Down-Down

PRR9

1.000

Mlig455_042875 {REF} {Length: 3207} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.2, Expect=6e-06]} {RNA1509_46710} {RNA1310_18270} {RNA815_15247.1}

MligTC455_46035

228

4.74

Mlig455_009727

Neo: -

Age: -

PCDH1

0.953

Mlig455_009727 {REF} {Length: 4658} {Pfam: Cadherin domain [PF00028.19, score=208.6]; Cadherin-like [PF16184.7, score=35.7]; Cadherin-like [PF08266.14, score=19.8]} {Human: ENSG00000156453, PCDH1, protocadherin 1, [Score=195, Expect=5e-50]; ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=192, Expect=8e-49]; ENSG00000253485, PCDHGA5, protocadherin gamma subfamily A, 5, [Score=192, Expect=2e-49]} {Mouse: ENSMUSG00000043458, Pcdhb12, protocadherin beta 12, [Score=197, Expect=1e-51]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=195, Expect=2e-50]; ENSMUSG00000044043, Pcdhb14, protocadherin beta 14, [Score=190, Expect=2e-49]; ENSMUSG00000102428, Pcdhga12, protocadherin gamma subfamily A, 12, [Score=189, Expect=7e-49]; ENSMUSG00000045876, Pcdhb8, protocadherin beta 8, [Score=188, Expect=6e-49]} {Dmel: FBgn0024836, stan, starry night, [Score=172, Expect=9e-43]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=125, Expect=1e-28]} {Smed: dd_Smed_v6_9106_0_1, dd_Smed_v6_9106_0_1, [Score=265, Expect=1e-73]} {RNA1509_29427} {RNA1310_8724} {RNA815_14837}