TomoSeq data search

Data search

Results for MligTC455_26182

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26182

898

18.72

Mlig455_070633

Neo: -

Age: -

TM9SF2

Mlig455_070633 {REF} {Length: 3278} {Pfam: Endomembrane protein 70 [PF02990.18, score=676.3]} {Human: ENSG00000125304, TM9SF2, transmembrane 9 superfamily member 2, [Score=892, Expect=0.0]} {Mouse: ENSMUSG00000025544, Tm9sf2, transmembrane 9 superfamily member 2, [Score=888, Expect=0.0]} {Dmel: FBgn0032880, TM9SF2, Transmembrane 9 superfamily protein member 2, [RH, Score=890, Expect=0.0]} {Celegans: WBGene00006472, tag-123, Transmembrane 9 superfamily member, [RH, Score=811, Expect=0.0]} {Smed: dd_Smed_v6_2806_0_1, dd_Smed_v6_2806_0_1, [Score=476, Expect=6e-161]} {RNA1509_25453, RNA1509_47814, RNA1509_5142} {RNA1310_6047.1, RNA1509_25453, RNA1509_47814, RNA1509_5142} {RNA1509_25453, RNA1509_47814, RNA1509_5142, RNA815_1817}

Cumulative graph for MligTC455_26182

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.682	4.496	0.49410	1.00000
RegionR2	0.363	4.496	0.45067	0.83832
RegionR3	0.071	4.496	0.86017	1.00000
RegionR4	0.047	4.496	0.91925	1.00000
RegionR5	-0.397	4.496	0.29781	0.63212
RegionR6	-0.04	4.496	0.92237	1.00000
RegionR7	0.213	4.496	0.65713	1.00000
RegionR8	0.426	4.496	0.44767	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.211	4.496	0.16326	0.90513
RegenerationR2	0.375	4.496	0.39155	0.80883
RegenerationR3	0.174	4.496	0.71339	0.95275
RegenerationR4	-0.248	4.496	0.62014	0.92074
RegenerationR5	0.381	4.496	0.41093	0.80620
RegenerationR6	0.137	4.496	0.77332	0.96388
RegenerationBL	0.266	4.496	0.58432	0.93558
RegenerationTP	-0.103	4.496	0.84921	1.00000

Genes with expression patterns similar to MligTC455_26182

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26182	898	18.72	Mlig455_070633	Neo: - Age: -	TM9SF2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_070633 {REF} {Length: 3278} {Pfam: Endomembrane protein 70 [PF02990.18, score=676.3]} {Human: ENSG00000125304, TM9SF2, transmembrane 9 superfamily member 2, [Score=892, Expect=0.0]} {Mouse: ENSMUSG00000025544, Tm9sf2, transmembrane 9 superfamily member 2, [Score=888, Expect=0.0]} {Dmel: FBgn0032880, TM9SF2, Transmembrane 9 superfamily protein member 2, [RH, Score=890, Expect=0.0]} {Celegans: WBGene00006472, tag-123, Transmembrane 9 superfamily member, [RH, Score=811, Expect=0.0]} {Smed: dd_Smed_v6_2806_0_1, dd_Smed_v6_2806_0_1, [Score=476, Expect=6e-161]} {RNA1509_25453, RNA1509_47814, RNA1509_5142} {RNA1310_6047.1, RNA1509_25453, RNA1509_47814, RNA1509_5142} {RNA1509_25453, RNA1509_47814, RNA1509_5142, RNA815_1817}
2.	MligTC455_26181	913	19.02	Mlig455_022640	Neo: - Age: -	TM9SF2	5.783	0.972	0.955	0.951	0.960	0.963	0.982	Mlig455_022640 {REF} {Length: 1896} {Pfam: Endomembrane protein 70 [PF02990.18, score=78.6]} {Human: ENSG00000125304, TM9SF2, transmembrane 9 superfamily member 2, [Score=162, Expect=1e-47]} {Mouse: ENSMUSG00000025544, Tm9sf2, transmembrane 9 superfamily member 2, [Score=162, Expect=2e-48]} {Dmel: FBgn0032880, TM9SF2, Transmembrane 9 superfamily protein member 2, [Score=159, Expect=1e-46]} {Celegans: WBGene00006472, tag-123, Transmembrane 9 superfamily member, [Score=141, Expect=3e-40]} {Smed: dd_Smed_v6_2806_0_1, dd_Smed_v6_2806_0_1, [Score=119, Expect=2e-32]} {RNA1509_25453} {RNA1310_6047.1} {RNA815_1817}
3.	MligTC455_45485	766	15.96	Mlig455_004917	Neo: - Age: -	DLG2	0.968	-	-	-	0.968	-	-	Mlig455_004917 {REF} {Length: 3289} {Pfam: Guanylate kinase [PF00625.23, score=164.7]; PDZ domain [PF00595.26, score=69.8]; PDZ domain [PF17820.3, score=37.6]; SH3 domain [PF00018.30, score=33.0]; Variant SH3 domain [PF07653.19, score=27.3]; PDZ domain [PF13180.8, score=22.1]; Variant SH3 domain [PF14604.8, score=20.5]} {Human: ENSG00000150672, DLG2, discs large MAGUK scaffold protein 2, [RH, Score=436, Expect=1e-141]; ENSG00000075711, DLG1, discs large MAGUK scaffold protein 1, [RH, Score=418, Expect=7e-137]} {Mouse: ENSMUSG00000052572, Dlg2, discs large MAGUK scaffold protein 2, [RH, Score=435, Expect=9e-143]; ENSMUSG00000022770, Dlg1, discs large MAGUK scaffold protein 1, [RH, Score=414, Expect=3e-135]} {Dmel: FBgn0001624, dlg1, discs large 1, [Score=446, Expect=2e-146]} {Celegans: WBGene00001006, dlg-1, Drosophila Discs LarGe homolog; MAGUK protein DLG-1; SAP97-like protein DLG-1, [RH, Score=357, Expect=5e-112]} {Smed: dd_Smed_v6_8511_0_1, dd_Smed_v6_8511_0_1, [RH, Score=322, Expect=4e-103]} {RNA1509_19643, RNA1509_26114, RNA1509_42144} {RNA1310_2555.1, RNA1509_19643, RNA1509_26114, RNA1509_42144} {RNA1509_19643, RNA1509_26114, RNA1509_42144, RNA815_2319}
4.	MligTC455_16285	2682	55.88	Mlig455_020319	Neo: - Age: Down-Up-Up	TMEM107	0.963	-	-	-	0.963	-	-	Mlig455_020319 {REF} {Length: 920} {Pfam: Transmembrane protein [PF14995.8, score=118.5]} {Human: ENSG00000179029, TMEM107, transmembrane protein 107, [RH, Score=127, Expect=1e-37]} {Mouse: ENSMUSG00000020895, Tmem107, transmembrane protein 107, [RH, Score=123, Expect=2e-36]} {Smed: dd_Smed_v6_13204_0_4, dd_Smed_v6_13204_0_4, [RH, Score=97.4, Expect=2e-26]} {RNA1509_30443} {RNA1310_40623} {RNA815_15713}
5.	MligTC455_17426	38	0.79	Mlig455_064891	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_064891 {REF} {Length: 363} {NoTransDecoderORF} {RNA1509_26392} {RNA1310_3224.1} {RNA815_40388}
6.	MligTC455_19041	54	1.12	Mlig455_030662	Neo: - Age: - Region-enriched R2: 9.337/0.00002 Region-enriched R3: 6.044/0.00168	CAV1	0.954	-	-	-	-	-	0.954	Mlig455_030662 {REF} {Length: 940} {Pfam: Caveolin [PF01146.19, score=117.8]} {Human: ENSG00000105974, CAV1, caveolin 1, [Score=98.2, Expect=1e-26]} {Mouse: ENSMUSG00000007655, Cav1, caveolin 1, caveolae protein, [Score=99.4, Expect=3e-27]} {Celegans: WBGene00000301, cav-1, Caveolin-1, [Score=73.9, Expect=6e-17]} {Smed: dd_Smed_v6_6535_0_1, dd_Smed_v6_6535_0_1, [RH, Score=133, Expect=6e-41]} {RNA1509_53325} {RNA1310_97043} {RNA815_32565}
7.	MligTC455_19040	49	1.03	Mlig455_003437	Neo: - Age: - Region-enriched R2: 6.133/0.00615 Region-enriched R3: 4.021/0.03085	CAV1	0.952	-	-	-	-	-	0.952	Mlig455_003437 {REF} {Length: 808} {Pfam: Caveolin [PF01146.19, score=118.3]} {Human: ENSG00000105974, CAV1, caveolin 1, [Score=101, Expect=7e-28]} {Mouse: ENSMUSG00000007655, Cav1, caveolin 1, caveolae protein, [Score=102, Expect=2e-28]} {Celegans: WBGene00000301, cav-1, Caveolin-1, [Score=73.6, Expect=9e-17]} {Smed: dd_Smed_v6_13481_0_1, dd_Smed_v6_13481_0_1, [RH, Score=142, Expect=8e-45]} {RNA1509_53381} {RNA1310_97043} {RNA815_32565}
8.	MligTC455_44978	122	2.54	Mlig455_003796	Neo: - Age: Down-Up-Up Region-enriched R2: 3.491/0.00422		0.952	-	-	-	-	-	0.952	Mlig455_003796 {REF} {Length: 542} {RNA1310_73705} {RNA815_38857}
9.	MligTC455_45999	128	2.67	Mlig455_045216	Neo: - Age: Down-Down-Up Region-enriched R2: 4.224/0.01692		0.951	-	-	-	-	-	0.951	Mlig455_045216 {REF} {Length: 1119} {RNA1509_35312} {RNA1310_137994} {RNA815_42624}

Berezikov Lab - 2020-2021 © ERIBA