Data search
Results for MligTC455_26225
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_26225 | 416 | 8.66 | Mlig455_012579 | Neo: - Age: - Regeneration-upregulated R6: 1.985 Regeneration-enriched R6: 1.985 |
SUPT6H | Mlig455_012579 {REF} {Length: 6771} {TRANSSPLICED} {Pfam: SH2 domain [PF14633.8, score=200.6]; Helix-hairpin-helix motif [PF14635.8, score=108.1]; Holliday-junction resolvase-like of SPT6 [PF14639.8, score=104.5]; Helix-turn-helix DNA-binding domain of SPT6 [PF14641.8, score=71.3]; HHH domain [PF17674.3, score=40.5]; Tex protein YqgF-like domain [PF16921.7, score=35.1]; S1 RNA binding domain [PF00575.25, score=31.6]; Tex-like protein N-terminal domain [PF09371.12, score=30.9]; Acidic N-terminal SPT6 [PF14632.8, score=27.8]} {Human: ENSG00000109111, SUPT6H, SPT6 homolog, histone chaperone, [RH, Score=1149, Expect=0.0]} {Mouse: ENSMUSG00000002052, Supt6, suppressor of Ty 6, [RH, Score=1146, Expect=0.0]} {Dmel: FBgn0028982, Spt6, [RH, Score=975, Expect=0.0]} {Celegans: WBGene00001259, emb-5, Suppressor of Ty 6 homolog, [RH, Score=727, Expect=0.0]} {Smed: dd_Smed_v6_3968_0_2, dd_Smed_v6_3968_0_2, [RH, Score=853, Expect=0.0]} {RNA1509_3566} {RNA1310_772.1} {RNA815_434} |
Cumulative graph for MligTC455_26225
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.084 | 3.494 | 0.41432 | 1.00000 | |
| RegionR2 | 1.087 | 3.494 | 0.05358 | 0.27699 | |
| RegionR3 | 0.243 | 3.494 | 0.55773 | 1.00000 | |
| RegionR4 | -0.824 | 3.494 | 0.12863 | 0.36275 | |
| RegionR5 | -0.11 | 3.494 | 0.76658 | 1.00000 | |
| RegionR6 | 0.038 | 3.494 | 0.92988 | 1.00000 | |
| RegionR7 | -0.483 | 3.494 | 0.48634 | 1.00000 | |
| RegionR8 | 1.134 | 3.494 | 0.08878 | 0.56355 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.122 | 3.494 | 0.07610 | 0.76566 | |
| RegenerationR2 | 0.794 | 3.494 | 0.07029 | 0.43081 | |
| RegenerationR3 | 0.864 | 3.494 | 0.08663 | 0.47819 | |
| RegenerationR4 | 1.422 | 3.494 | 0.00554 | 0.10596 | |
| RegenerationR5 | 1.085 | 3.494 | 0.01285 | 0.19884 | |
| RegenerationR6 | 1.985 | 3.494 | 0.00005 | 0.00589 | Specific for R6: 1.985 |
| RegenerationBL | 1.208 | 3.494 | 0.07579 | 0.32157 | |
| RegenerationTP | 0.729 | 3.494 | 0.30372 | 0.74906 |
Genes with expression patterns similar to MligTC455_26225
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_26225 | 416 | 8.66 | Mlig455_012579 | Neo: - Age: - Regeneration-upregulated R6: 1.985 Regeneration-enriched R6: 1.985 |
SUPT6H | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_012579 {REF} {Length: 6771} {TRANSSPLICED} {Pfam: SH2 domain [PF14633.8, score=200.6]; Helix-hairpin-helix motif [PF14635.8, score=108.1]; Holliday-junction resolvase-like of SPT6 [PF14639.8, score=104.5]; Helix-turn-helix DNA-binding domain of SPT6 [PF14641.8, score=71.3]; HHH domain [PF17674.3, score=40.5]; Tex protein YqgF-like domain [PF16921.7, score=35.1]; S1 RNA binding domain [PF00575.25, score=31.6]; Tex-like protein N-terminal domain [PF09371.12, score=30.9]; Acidic N-terminal SPT6 [PF14632.8, score=27.8]} {Human: ENSG00000109111, SUPT6H, SPT6 homolog, histone chaperone, [RH, Score=1149, Expect=0.0]} {Mouse: ENSMUSG00000002052, Supt6, suppressor of Ty 6, [RH, Score=1146, Expect=0.0]} {Dmel: FBgn0028982, Spt6, [RH, Score=975, Expect=0.0]} {Celegans: WBGene00001259, emb-5, Suppressor of Ty 6 homolog, [RH, Score=727, Expect=0.0]} {Smed: dd_Smed_v6_3968_0_2, dd_Smed_v6_3968_0_2, [RH, Score=853, Expect=0.0]} {RNA1509_3566} {RNA1310_772.1} {RNA815_434} |
| 2. | MligTC455_21027 | 1167 | 24.32 | Mlig455_019739 | Neo: - Age: logFC(26M/2M)=-0.527 |
MEX3B | 2.422 | - | 0.727 | - | 0.725 | 0.970 | - | Mlig455_019739 {REF} {Length: 2452} {Pfam: KH domain [PF00013.31, score=72.2]; NusA-like KH domain [PF13184.8, score=22.6]; KH domain [PF07650.19, score=20.4]; KH domain [PF13083.8, score=20.2]} {Human: ENSG00000183496, MEX3B, mex-3 RNA binding family member B, [RH, Score=112, Expect=9e-27]; ENSG00000176624, MEX3C, mex-3 RNA binding family member C, [RH, Score=110, Expect=8e-26]} {Mouse: ENSMUSG00000057706, Mex3b, mex3 RNA binding family member B, [RH, Score=112, Expect=6e-27]; ENSMUSG00000037253, Mex3c, mex3 RNA binding family member C, [RH, Score=110, Expect=4e-26]} {Dmel: FBgn0039920, CG11360, [Score=101, Expect=5e-23]} {Celegans: WBGene00003229, mex-3, Muscle EXcess, [Score=108, Expect=3e-26]} {Smed: dd_Smed_v6_1999_0_1, dd_Smed_v6_1999_0_1, [RH, Score=70.5, Expect=4e-13]} {RNA1509_6767} {RNA1310_9378} {RNA815_11633.1} |
| 3. | MligTC455_36190 | 239 | 4.99 | Mlig455_011419 | Neo: - Age: - Region-enriched R6: 8.371/0.00000 |
GLIPR1 | 0.983 | - | - | - | - | 0.983 | - | Mlig455_011419 {REF} {Length: 1624} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=61.8]} {Human: ENSG00000139278, GLIPR1, GLI pathogenesis related 1, [Score=76.6, Expect=3e-15]} {Mouse: ENSMUSG00000078949, R3hdml, R3H domain containing-like, [Score=73.2, Expect=3e-14]; ENSMUSG00000024011, Pi16, peptidase inhibitor 16, [Score=70.9, Expect=6e-13]} {Dmel: FBgn0038126, CG8483, [Score=72.0, Expect=1e-13]} {Celegans: WBGene00015246, scl-23, SCP-Like extracellular protein, [RH, Score=58.5, Expect=2e-09]} {Smed: dd_Smed_v6_6756_0_1, dd_Smed_v6_6756_0_1, [Score=96.3, Expect=3e-23]} {RNA1509_16373} {RNA1310_19845.1} {RNA815_8030} |
| 4. | MligTC455_18763 | 204 | 4.25 | Mlig455_023704 | Neo: - Age: - Region-enriched R6: 3.960/0.00001 |
RASEF | 0.962 | - | - | - | - | 0.962 | - | Mlig455_023704 {REF} {Length: 2598} {Pfam: Ras family [PF00071.24, score=164.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=102.5]; ADP-ribosylation factor family [PF00025.23, score=59.0]; EF-hand domain pair [PF13499.8, score=47.9]; EF hand [PF00036.34, score=38.9]; EF-hand domain [PF13405.8, score=38.8]; 50S ribosome-binding GTPase [PF01926.25, score=37.4]; EF-hand domain pair [PF13833.8, score=32.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=30.1]; EF hand [PF13202.8, score=24.9]; Gtr1/RagA G protein conserved region [PF04670.14, score=24.3]; RsgA GTPase [PF03193.18, score=22.2]} {Human: ENSG00000165105, RASEF, RAS and EF-hand domain containing, [Score=201, Expect=5e-55]} {Mouse: ENSMUSG00000043003, Rasef, RAS and EF hand domain containing, [Score=203, Expect=4e-57]} {Dmel: FBgn0086913, Rab26, [Score=144, Expect=3e-37]} {Celegans: WBGene00016344, rsef-1, Ras and EF-hand domain-containing protein homolog, [RH, Score=214, Expect=2e-60]} {Smed: dd_Smed_v6_4284_0_1, dd_Smed_v6_4284_0_1, [Score=209, Expect=8e-58]} {RNA1509_35225} {RNA1310_5487} {RNA815_12441} |
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