M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_26239

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_26239 6250 130.21 Mlig455_036233

Neo: -

Age: logFC(26M/2M)=1.030

Region-enriched R4: 1.455/0.00000

 ATP5MC2 Mlig455_036233 {REF} {Length: 754} {TRANSSPLICED} {Pfam: ATP synthase subunit C [PF00137.23, score=41.8]} {Human: ENSG00000135390, ATP5MC2, ATP synthase membrane subunit c locus 2, [RH, Score=151, Expect=1e-47]; ENSG00000159199, ATP5MC1, ATP synthase membrane subunit c locus 1, [RH, Score=150, Expect=8e-48]; ENSG00000154518, ATP5MC3, ATP synthase membrane subunit c locus 3, [RH, Score=145, Expect=2e-45]} {Mouse: ENSMUSG00000006057, Atp5g1, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9), [RH, Score=157, Expect=2e-50]} {Dmel: FBgn0039830, ATPsynC, ATP synthase, subunit C, [RH, Score=147, Expect=8e-47]} {Celegans: WBGene00022336, Y82E9BR.3, ATP synthase lipid-binding protein, mitochondrial, [RH, Score=150, Expect=2e-48]} {Smed: dd_Smed_v6_401_0_1, dd_Smed_v6_401_0_1, [RH, Score=115, Expect=2e-34]} {RNA1509_15382, RNA1509_45717} {RNA1310_25694, RNA1509_15382, RNA1509_45717} {RNA1509_15382, RNA1509_45717, RNA815_23090.1}

Cumulative graph for MligTC455_26239

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.061 7.091 0.01809 0.37559
RegionR2 -0.427 7.091 0.06866 0.31863
RegionR3 0.359 7.091 0.06163 0.43815
RegionR4 1.455 7.091 0.00000 0.00000
RegionR5 0.91 7.091 0.00000 0.00002
RegionR6 0.184 7.091 0.35269 0.93730
RegionR7 -0.481 7.091 0.04100 0.38787
RegionR8 -0.939 7.091 0.00114 0.05149

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.205 7.091 0.72905 1.00000
RegenerationR2 -0.081 7.091 0.72091 0.96301
RegenerationR3 -0.076 7.091 0.74363 0.96196
RegenerationR4 -0.18 7.091 0.44829 0.84083
RegenerationR5 -0.002 7.091 0.99418 1.00000
RegenerationR6 0.45 7.091 0.05712 0.29978
RegenerationBL 0.485 7.091 0.03845 0.22241
RegenerationTP 0.391 7.091 0.14687 0.57049


Genes with expression patterns similar to MligTC455_26239

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_26239 6250 130.21 Mlig455_036233

Neo: -

Age: logFC(26M/2M)=1.030

Region-enriched R4: 1.455/0.00000

 ATP5MC2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_036233 {REF} {Length: 754} {TRANSSPLICED} {Pfam: ATP synthase subunit C [PF00137.23, score=41.8]} {Human: ENSG00000135390, ATP5MC2, ATP synthase membrane subunit c locus 2, [RH, Score=151, Expect=1e-47]; ENSG00000159199, ATP5MC1, ATP synthase membrane subunit c locus 1, [RH, Score=150, Expect=8e-48]; ENSG00000154518, ATP5MC3, ATP synthase membrane subunit c locus 3, [RH, Score=145, Expect=2e-45]} {Mouse: ENSMUSG00000006057, Atp5g1, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9), [RH, Score=157, Expect=2e-50]} {Dmel: FBgn0039830, ATPsynC, ATP synthase, subunit C, [RH, Score=147, Expect=8e-47]} {Celegans: WBGene00022336, Y82E9BR.3, ATP synthase lipid-binding protein, mitochondrial, [RH, Score=150, Expect=2e-48]} {Smed: dd_Smed_v6_401_0_1, dd_Smed_v6_401_0_1, [RH, Score=115, Expect=2e-34]} {RNA1509_15382, RNA1509_45717} {RNA1310_25694, RNA1509_15382, RNA1509_45717} {RNA1509_15382, RNA1509_45717, RNA815_23090.1}
2. MligTC455_26238 5917 123.27 Mlig455_005520

Neo: -

Age: -

Region-enriched R4: 1.434/0.00000

 ATP5MC2 5.909 0.996 0.981 0.966 0.993 0.977 0.996 Mlig455_005520 {REF} {Length: 754} {TRANSSPLICED} {Pfam: ATP synthase subunit C [PF00137.23, score=41.8]} {Human: ENSG00000135390, ATP5MC2, ATP synthase membrane subunit c locus 2, [RH, Score=151, Expect=1e-47]; ENSG00000159199, ATP5MC1, ATP synthase membrane subunit c locus 1, [RH, Score=150, Expect=8e-48]; ENSG00000154518, ATP5MC3, ATP synthase membrane subunit c locus 3, [RH, Score=145, Expect=2e-45]} {Mouse: ENSMUSG00000006057, Atp5g1, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9), [RH, Score=156, Expect=4e-50]; ENSMUSG00000062683, Atp5g2, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9), [RH, Score=149, Expect=5e-47]} {Dmel: FBgn0039830, ATPsynC, ATP synthase, subunit C, [RH, Score=147, Expect=8e-47]} {Celegans: WBGene00022336, Y82E9BR.3, ATP synthase lipid-binding protein, mitochondrial, [RH, Score=150, Expect=3e-48]} {Smed: dd_Smed_v6_401_0_1, dd_Smed_v6_401_0_1, [RH, Score=115, Expect=2e-34]} {RNA1509_17509, RNA1509_55692} {RNA1310_25694, RNA1509_17509, RNA1509_55692} {RNA1509_17509, RNA1509_55692, RNA815_23090.1}
3. MligTC455_26237 5570 116.04 Mlig455_005447

Neo: -

Age: Up-Down-Down

Region-enriched R4: 1.435/0.00000

 ATP5MC2 5.309 0.987 0.972 0.765 0.934 0.794 0.857 Mlig455_005447 {REF} {Length: 651} {TRANSSPLICED} {Pfam: ATP synthase subunit C [PF00137.23, score=41.8]} {Human: ENSG00000135390, ATP5MC2, ATP synthase membrane subunit c locus 2, [RH, Score=151, Expect=1e-47]; ENSG00000159199, ATP5MC1, ATP synthase membrane subunit c locus 1, [RH, Score=150, Expect=8e-48]; ENSG00000154518, ATP5MC3, ATP synthase membrane subunit c locus 3, [RH, Score=145, Expect=2e-45]} {Mouse: ENSMUSG00000006057, Atp5g1, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9), [RH, Score=156, Expect=4e-50]; ENSMUSG00000062683, Atp5g2, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9), [RH, Score=149, Expect=5e-47]} {Dmel: FBgn0039830, ATPsynC, ATP synthase, subunit C, [RH, Score=147, Expect=8e-47]} {Celegans: WBGene00022336, Y82E9BR.3, ATP synthase lipid-binding protein, mitochondrial, [RH, Score=150, Expect=3e-48]} {Smed: dd_Smed_v6_401_0_1, dd_Smed_v6_401_0_1, [RH, Score=115, Expect=2e-34]} {RNA1509_45717} {RNA1310_25694} {RNA815_23090.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA