TomoSeq data search

Data search

Results for MligTC455_26301

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26301

317

6.61

Mlig455_042037

Neo: -

Age: Up-Down-Up

Mlig455_042037 {REF} {Length: 2868} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=321.0]; Tetratricopeptide repeat [PF13424.8, score=40.2]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=122, Expect=1e-30]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=112, Expect=2e-27]} {RNA1509_29458} {RNA1310_9089.1} {RNA815_7548.2}

Cumulative graph for MligTC455_26301

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.513	3.128	0.39983	1.00000
RegionR2	-0.323	3.128	0.85912	1.00000
RegionR3	0.785	3.128	0.25319	0.79723
RegionR4	1.578	3.128	0.04598	0.18230
RegionR5	0.547	3.128	0.42010	0.78018
RegionR6	0.628	3.128	0.37629	0.95656
RegionR7	-0.259	3.128	0.90837	1.00000
RegionR8	-4.468	3.128	0.06983	0.50660

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.106	3.128	0.13885	0.87575
RegenerationR2	-0.529	3.128	0.38280	0.80329
RegenerationR3	-0.714	3.128	0.24576	0.67982
RegenerationR4	-0.422	3.128	0.50199	0.87053
RegenerationR5	0.17	3.128	0.77063	0.97923
RegenerationR6	-0.506	3.128	0.43018	0.75810
RegenerationBL	2.631	3.128	0.00865	0.09210
RegenerationTP	3.559	3.128	0.00584	0.12785

Genes with expression patterns similar to MligTC455_26301

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26301	317	6.61	Mlig455_042037	Neo: - Age: Up-Down-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_042037 {REF} {Length: 2868} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=321.0]; Tetratricopeptide repeat [PF13424.8, score=40.2]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=122, Expect=1e-30]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=112, Expect=2e-27]} {RNA1509_29458} {RNA1310_9089.1} {RNA815_7548.2}
2.	MligTC455_36342	876	18.26	Mlig455_067427, Mlig455_069562	Neo: - Age: Down-Up-Up	TBX2	0.965	-	-	-	-	0.965	-	Mlig455_067427 {REF} {Length: 4570} {Pfam: T-box [PF00907.24, score=243.9]} {Human: ENSG00000121068, TBX2, T-box 2, [Score=258, Expect=7e-79]; ENSG00000135111, TBX3, T-box 3, [Score=254, Expect=2e-77]} {Mouse: ENSMUSG00000000093, Tbx2, T-box 2, [Score=257, Expect=7e-79]; ENSMUSG00000018604, Tbx3, T-box 3, [Score=254, Expect=1e-77]} {Dmel: FBgn0000179, bi, bifid, [Score=256, Expect=9e-77]} {Celegans: WBGene00006543, tbx-2, T-box protein 2, [Score=242, Expect=3e-76]} {Smed: dd_Smed_v6_11693_0_1, dd_Smed_v6_11693_0_1, [Score=254, Expect=7e-79]} {RNA1509_22203} {RNA1310_19638, RNA1509_22203} {RNA1509_22203, RNA815_9309} Mlig455_069562 {REF} {Length: 2538} {Pfam: T-box [PF00907.24, score=243.9]} {Human: ENSG00000121068, TBX2, T-box 2, [Score=258, Expect=7e-79]; ENSG00000135111, TBX3, T-box 3, [Score=254, Expect=2e-77]} {Mouse: ENSMUSG00000000093, Tbx2, T-box 2, [Score=257, Expect=7e-79]; ENSMUSG00000018604, Tbx3, T-box 3, [Score=254, Expect=1e-77]} {Dmel: FBgn0000179, bi, bifid, [Score=256, Expect=8e-77]} {Celegans: WBGene00006543, tbx-2, T-box protein 2, [Score=242, Expect=3e-76]} {Smed: dd_Smed_v6_11693_0_1, dd_Smed_v6_11693_0_1, [Score=254, Expect=8e-79]} {RNA1509_22203} {RNA1310_19638} {RNA815_9309}
3.	MligTC455_27324	118	2.45	Mlig455_045818	Neo: Irradiation Age: Up-Down-Up Region-enriched R4: 4.088/0.01215	ANKRA2	0.953	-	-	0.953	-	-	-	Mlig455_045818 {REF} {Length: 2713} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=46.6]; Ankyrin repeats (many copies) [PF13637.8, score=37.6]; Ankyrin repeat [PF13606.8, score=33.7]; Ankyrin repeats (many copies) [PF13857.8, score=26.4]; Ankyrin repeat [PF00023.32, score=24.1]} {Human: ENSG00000164331, ANKRA2, ankyrin repeat family A member 2, [Score=50.8, Expect=8e-07]; ENSG00000085185, BCORL1, BCL6 corepressor like 1, [Score=50.1, Expect=2e-06]; ENSG00000145362, ANK2, ankyrin 2, [Score=49.7, Expect=4e-06]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=53.5, Expect=1e-07]; ENSMUSG00000036959, Bcorl1, BCL6 co-repressor-like 1, [Score=51.6, Expect=4e-07]} {Dmel: FBgn0086898, dgo, diego, [Score=57.4, Expect=4e-09]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=66.6, Expect=2e-12]} {RNA1509_52102} {RNA1310_40022} {RNA815_16446}
4.	MligTC455_24932	124	2.57	Mlig455_013157	Neo: - Age: Up-Down-Down	AKAP7	0.95	-	-	-	-	0.950	-	Mlig455_013157 {REF} {Length: 1775} {TRANSSPLICED} {Pfam: AKAP7 2'5' RNA ligase-like domain [PF10469.11, score=114.6]; 2'-5' RNA ligase superfamily [PF13563.8, score=33.8]; Coronavirus NS2A protein [PF05213.14, score=21.3]; LigT like Phosphoesterase [PF02834.18, score=19.6]} {Human: ENSG00000118507, AKAP7, A-kinase anchoring protein 7, [RH, Score=75.5, Expect=6e-15]} {Mouse: ENSMUSG00000039166, Akap7, A kinase (PRKA) anchor protein 7, [RH, Score=70.5, Expect=2e-13]} {RNA1509_51512} {RNA1310_8587.1} {RNA815_20918}

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