TomoSeq data search

Data search

Results for MligTC455_26393

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26393	108	2.25	Mlig455_045599, Mlig455_045606	Neo: - Age: - Region-enriched R2: 4.758/0.01719	SORT1	Mlig455_045599 {REF} {Length: 4239} {Pfam: Sortilin, neurotensin receptor 3, [PF15902.7, score=243.2]; Sortilin, neurotensin receptor 3, C-terminal [PF15901.7, score=108.6]; BNR/Asp-box repeat [PF02012.22, score=38.0]} {Human: ENSG00000134243, SORT1, sortilin 1, [RH, Score=348, Expect=4e-106]} {Mouse: ENSMUSG00000068747, Sort1, sortilin 1, [RH, Score=357, Expect=1e-109]} {Smed: dd_Smed_v6_1666_0_1, dd_Smed_v6_1666_0_1, [Score=476, Expect=8e-156]} {RNA1509_9495} {RNA1310_3786} {RNA815_246} Mlig455_045606 {REF} {Length: 5063} {TRANSSPLICED} {Pfam: Sortilin, neurotensin receptor 3, [PF15902.7, score=107.4]; BNR/Asp-box repeat [PF02012.22, score=26.3]; TATA element modulatory factor 1 TATA binding [PF12325.10, score=19.8]} {Human: ENSG00000134243, SORT1, sortilin 1, [Score=107, Expect=3e-23]} {Mouse: ENSMUSG00000068747, Sort1, sortilin 1, [Score=105, Expect=1e-22]} {Smed: dd_Smed_v6_1666_0_1, dd_Smed_v6_1666_0_1, [Score=159, Expect=3e-40]} {RNA1509_53586} {RNA1310_3786} {RNA815_246}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26393

108

2.25

Mlig455_045599, Mlig455_045606

Neo: -

Age: -

Region-enriched R2: 4.758/0.01719

SORT1

Mlig455_045599 {REF} {Length: 4239} {Pfam: Sortilin, neurotensin receptor 3, [PF15902.7, score=243.2]; Sortilin, neurotensin receptor 3, C-terminal [PF15901.7, score=108.6]; BNR/Asp-box repeat [PF02012.22, score=38.0]} {Human: ENSG00000134243, SORT1, sortilin 1, [RH, Score=348, Expect=4e-106]} {Mouse: ENSMUSG00000068747, Sort1, sortilin 1, [RH, Score=357, Expect=1e-109]} {Smed: dd_Smed_v6_1666_0_1, dd_Smed_v6_1666_0_1, [Score=476, Expect=8e-156]} {RNA1509_9495} {RNA1310_3786} {RNA815_246}

Mlig455_045606 {REF} {Length: 5063} {TRANSSPLICED} {Pfam: Sortilin, neurotensin receptor 3, [PF15902.7, score=107.4]; BNR/Asp-box repeat [PF02012.22, score=26.3]; TATA element modulatory factor 1 TATA binding [PF12325.10, score=19.8]} {Human: ENSG00000134243, SORT1, sortilin 1, [Score=107, Expect=3e-23]} {Mouse: ENSMUSG00000068747, Sort1, sortilin 1, [Score=105, Expect=1e-22]} {Smed: dd_Smed_v6_1666_0_1, dd_Smed_v6_1666_0_1, [Score=159, Expect=3e-40]} {RNA1509_53586} {RNA1310_3786} {RNA815_246}

Cumulative graph for MligTC455_26393

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.255	2.094	0.02392	0.41407
RegionR2	4.758	2.094	0.00071	0.01719
RegionR3	0.853	2.094	0.47139	0.97706
RegionR4	-4.389	2.094	0.00150	0.01426
RegionR5	-0.616	2.094	0.38928	0.74490
RegionR6	0.875	2.094	0.50763	1.00000
RegionR7	0.646	2.094	0.40961	1.00000
RegionR8	3.127	2.094	0.02333	0.29820

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.053	2.094	0.90198	1.00000
RegenerationR2	-2.742	2.094	0.04751	0.35977
RegenerationR3	0.157	2.094	0.81733	0.98653
RegenerationR4	-2.008	2.094	0.13132	0.54784
RegenerationR5	-2.607	2.094	0.07432	0.42655
RegenerationR6	-2.309	2.094	0.14047	0.45910
RegenerationBL	-5.926	2.094	0.03473	0.20966
RegenerationTP	-5.208	2.094	0.03719	0.32102

Genes with expression patterns similar to MligTC455_26393

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26393	108	2.25	Mlig455_045599, Mlig455_045606	Neo: - Age: - Region-enriched R2: 4.758/0.01719	SORT1	3	1.000	1.000	-	-	1.000	-	Mlig455_045599 {REF} {Length: 4239} {Pfam: Sortilin, neurotensin receptor 3, [PF15902.7, score=243.2]; Sortilin, neurotensin receptor 3, C-terminal [PF15901.7, score=108.6]; BNR/Asp-box repeat [PF02012.22, score=38.0]} {Human: ENSG00000134243, SORT1, sortilin 1, [RH, Score=348, Expect=4e-106]} {Mouse: ENSMUSG00000068747, Sort1, sortilin 1, [RH, Score=357, Expect=1e-109]} {Smed: dd_Smed_v6_1666_0_1, dd_Smed_v6_1666_0_1, [Score=476, Expect=8e-156]} {RNA1509_9495} {RNA1310_3786} {RNA815_246} Mlig455_045606 {REF} {Length: 5063} {TRANSSPLICED} {Pfam: Sortilin, neurotensin receptor 3, [PF15902.7, score=107.4]; BNR/Asp-box repeat [PF02012.22, score=26.3]; TATA element modulatory factor 1 TATA binding [PF12325.10, score=19.8]} {Human: ENSG00000134243, SORT1, sortilin 1, [Score=107, Expect=3e-23]} {Mouse: ENSMUSG00000068747, Sort1, sortilin 1, [Score=105, Expect=1e-22]} {Smed: dd_Smed_v6_1666_0_1, dd_Smed_v6_1666_0_1, [Score=159, Expect=3e-40]} {RNA1509_53586} {RNA1310_3786} {RNA815_246}
2.	MligTC455_15309	35	0.73	Mlig455_065461, Mlig455_067184	Neo: - Age: -	FOXRED2	0.973	-	-	-	-	0.973	-	Mlig455_065461 {REF} {Length: 2087} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=125.5]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=41.4]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=35.0]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=22.8]; FAD dependent oxidoreductase [PF01266.26, score=18.6]; HI0933-like protein [PF03486.16, score=18.6]} {Human: ENSG00000100350, FOXRED2, FAD dependent oxidoreductase domain containing 2, [Score=459, Expect=9e-154]} {Mouse: ENSMUSG00000016552, Foxred2, FAD-dependent oxidoreductase domain containing 2, [Score=457, Expect=2e-153]} {Smed: dd_Smed_v6_12138_0_1, dd_Smed_v6_12138_0_1, [RH, Score=464, Expect=5e-157]} {RNA1509_42325, RNA1509_58014} {RNA1310_12953, RNA1509_42325, RNA1509_58014} {RNA1509_42325, RNA1509_58014, RNA815_4760} Mlig455_067184 {REF} {Length: 2619} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=124.4]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=40.0]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=36.5]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=21.1]; FAD-NAD(P)-binding [PF13454.8, score=20.0]} {Human: ENSG00000100350, FOXRED2, FAD dependent oxidoreductase domain containing 2, [Score=460, Expect=1e-150]} {Mouse: ENSMUSG00000016552, Foxred2, FAD-dependent oxidoreductase domain containing 2, [Score=458, Expect=3e-150]} {Smed: dd_Smed_v6_12138_0_1, dd_Smed_v6_12138_0_1, [RH, Score=467, Expect=7e-155]} {RNA1509_42325} {RNA1310_12953} {RNA815_4760}
3.	MligTC455_57723	15	0.3	Mlig455_023800	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_023800 {REF} {Length: 585} {NoTransDecoderORF}
4.	MligTC455_16208	38	0.8	Mlig455_060360	Neo: - Age: -	FCN2	0.955	-	-	-	-	0.955	-	Mlig455_060360 {REF} {Length: 1127} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=136.3]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=118, Expect=7e-31]; ENSG00000085265, FCN1, ficolin 1, [Score=117, Expect=3e-30]} {Mouse: ENSMUSG00000026835, Fcnb, ficolin B, [Score=116, Expect=6e-30]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=111, Expect=5e-27]} {Dmel: FBgn0034160, CG5550, [Score=109, Expect=6e-28]} {Celegans: WBGene00020516, T15B7.1, [Score=52.4, Expect=1e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=96.3, Expect=5e-22]} {RNA1310_68891}