Data search


search
Exact
Search

Results for MligTC455_26399

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_26399 35 0.73 Mlig455_033739

Neo: Int S/G2/M

Age: -

Mlig455_033739 {REF} {Length: 1616} {RNA1509_54569} {RNA1310_6610.1} {RNA815_3492}

Cumulative graph for MligTC455_26399

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 8.641 0.869 0.18870 0.82156
RegionR2 -0.64 0.869 0.72267 1.00000
RegionR3 -2.841 0.869 0.99912 1.00000
RegionR4 2.759 0.869 0.69397 0.98490
RegionR5 -1.751 0.869 0.99977 1.00000
RegionR6 -4.268 0.869 1.00000 1.00000
RegionR7 1.192 0.869 0.52421 1.00000
RegionR8 -3.091 0.869 0.99971 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.94 0.869 0.93592 1.00000
RegenerationR2 3.065 0.869 0.00590 0.12279
RegenerationR3 2.499 0.869 0.17475 0.61064
RegenerationR4 0.335 0.869 0.45498 0.84450
RegenerationR5 3.721 0.869 0.03526 0.31221
RegenerationR6 5.874 0.869 0.00209 0.05210
RegenerationBL 4.511 0.869 0.02943 0.19091
RegenerationTP -1.99 0.869 0.99966 1.00000


Genes with expression patterns similar to MligTC455_26399

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_26399 35 0.73 Mlig455_033739

Neo: Int S/G2/M

Age: -

2 - - - - 1.000 1.000 Mlig455_033739 {REF} {Length: 1616} {RNA1509_54569} {RNA1310_6610.1} {RNA815_3492}
2. MligTC455_24936 37 0.77 Mlig455_002505

Neo: -

Age: -

NAA40 0.965 - - - - - 0.965 Mlig455_002505 {REF} {Length: 1146} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=35.1]; Acetyltransferase (GNAT) domain [PF13508.9, score=23.6]; FR47-like protein [PF08445.12, score=19.3]; Acetyltransferase (GNAT) domain [PF13420.9, score=18.8]} {Human: ENSG00000110583, NAA40, N(alpha)-acetyltransferase 40, NatD catalytic subunit, [Score=84.3, Expect=4e-20]} {Mouse: ENSMUSG00000024764, Naa40, N(alpha)-acetyltransferase 40, NatD catalytic subunit, [Score=84.0, Expect=3e-20]} {Dmel: FBgn0039687, Naa40, N(alpha)-acetyltransferase 40, [Score=62.4, Expect=2e-12]} {Celegans: WBGene00021392, Y38A10A.7, [Score=84.0, Expect=2e-20]} {Smed: dd_Smed_v6_5816_0_1, dd_Smed_v6_5816_0_1, [Score=89.7, Expect=7e-23]} {RNA1509_41870} {RNA1310_14010.1, RNA1509_41870} {RNA1509_41870, RNA815_52371}
3. MligTC455_38345 26 0.53 Mlig455_044919

Neo: -

Age: logFC(26M/2M)=1.537

0.964 - - - - - 0.964 Mlig455_044919 {REF} {Length: 1662} {TRANSSPLICED} {RNA1509_30974} {RNA1310_33367} {RNA815_15130}
4. MligTC455_24298 67 1.39 Mlig455_059907

Neo: Irradiation

Age: Up-Down-Up

Region-enriched R5: 4.165/0.00034

TYR 0.962 - - - - - 0.962 Mlig455_059907 {REF} {Length: 2123} {Pfam: Common central domain of tyrosinase [PF00264.22, score=105.4]} {Human: ENSG00000077498, TYR, tyrosinase, [Score=206, Expect=2e-59]} {Mouse: ENSMUSG00000004651, Tyr, tyrosinase, [Score=210, Expect=3e-61]} {Celegans: WBGene00015332, tyr-1, Putative tyrosinase-like protein tyr-1, [RH, Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_18243_0_1, dd_Smed_v6_18243_0_1, [Score=261, Expect=7e-82]} {RNA1509_30640} {RNA1310_17348} {RNA815_4567.1}
5. MligTC455_34112 65 1.35 Mlig455_013791, Mlig455_013923

Neo: Irradiation

Age: logFC(26M/2M)=0.605

Region-enriched R5: 3.535/0.00182

AC243734.1, CHRNA7 0.958 - - - - - 0.958

Mlig455_013791 {REF} {Length: 2292} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=165.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.5]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=3e-71]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=3e-71]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=238, Expect=5e-71]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=238, Expect=3e-71]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=218, Expect=5e-63]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=237, Expect=3e-70]} {Smed: dd_Smed_v6_8058_0_1, dd_Smed_v6_8058_0_1, [Score=211, Expect=7e-61]} {RNA1310_24918} {RNA815_19482}

Mlig455_013923 {REF} {Length: 5041} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=163.0]; Ankyrin repeats (3 copies) [PF12796.9, score=117.3]; Ankyrin repeats (many copies) [PF13637.8, score=95.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.4]; Ankyrin repeat [PF13606.8, score=86.8]; Ankyrin repeats (many copies) [PF13857.8, score=84.0]; Ankyrin repeat [PF00023.32, score=79.8]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=240, Expect=2e-68]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=240, Expect=2e-68]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=5e-68]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=240, Expect=2e-68]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=219, Expect=7e-61]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=238, Expect=2e-67]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=213, Expect=1e-58]} {RNA1509_8073} {RNA1310_2090.2} {RNA815_994.1}
6. MligTC455_17083 101 2.09 Mlig455_051665

Neo: -

Age: -

Region-enriched R4: 4.551/0.01623

0.957 - - - - 0.957 - Mlig455_051665 {REF} {Length: 1301} {TRANSSPLICED} {RNA1310_71021.1} {RNA815_50920}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA