TomoSeq data search

Data search

Results for MligTC455_26481

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26481	3439	71.66	Mlig455_012567	Neo: - Age: Down-Up-Up Region-enriched R3: 1.055/0.00019 Regeneration-upregulated TP: 1.342 Regeneration-enriched TP: 1.342		Mlig455_012567 {REF} {Length: 544} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1283, RNA1509_35164, RNA1509_3626} {RNA1310_46026, RNA1509_1283, RNA1509_35164, RNA1509_3626} {RNA1509_1283, RNA1509_35164, RNA1509_3626, RNA815_481.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_26481

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.131	6.211	0.79268	1.00000
RegionR2	-0.354	6.211	0.22441	0.59468
RegionR3	1.055	6.211	0.00000	0.00019
RegionR4	0.857	6.211	0.00121	0.01204
RegionR5	0.559	6.211	0.01172	0.06478
RegionR6	-0.007	6.211	0.97833	1.00000
RegionR7	-0.78	6.211	0.01089	0.18141
RegionR8	-1.2	6.211	0.00214	0.07836

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.262	6.211	0.66967	1.00000
RegenerationR2	0.223	6.211	0.42835	0.83313
RegenerationR3	-0.289	6.211	0.31063	0.74127
RegenerationR4	-0.273	6.211	0.34976	0.78028
RegenerationR5	-0.144	6.211	0.60935	0.91413
RegenerationR6	-0.169	6.211	0.57673	0.85554
RegenerationBL	-0.23	6.211	0.50396	0.86802
RegenerationTP	1.342	6.211	0.00006	0.00821	Specific for TP: 1.342

Genes with expression patterns similar to MligTC455_26481

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26481	3439	71.66	Mlig455_012567	Neo: - Age: Down-Up-Up Region-enriched R3: 1.055/0.00019 Regeneration-upregulated TP: 1.342 Regeneration-enriched TP: 1.342		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_012567 {REF} {Length: 544} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1283, RNA1509_35164, RNA1509_3626} {RNA1310_46026, RNA1509_1283, RNA1509_35164, RNA1509_3626} {RNA1509_1283, RNA1509_35164, RNA1509_3626, RNA815_481.1}
2.	MligTC455_20951	660	13.75	Mlig455_008058	Neo: - Age: -	TRPC5	0.951	-	-	-	-	-	0.951	Mlig455_008058 {REF} {Length: 3242} {Pfam: Transient receptor ion channel II [PF08344.13, score=100.6]; Ion transport protein [PF00520.33, score=93.3]; Polycystin cation channel [PF08016.14, score=32.7]; Ankyrin repeats (3 copies) [PF12796.9, score=29.6]; Ankyrin repeat [PF13606.8, score=22.1]; Ankyrin repeats (many copies) [PF13637.8, score=21.3]} {Human: ENSG00000072315, TRPC5, transient receptor potential cation channel subfamily C member 5, [Score=612, Expect=0.0]; ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [Score=585, Expect=0.0]} {Mouse: ENSMUSG00000041710, Trpc5, transient receptor potential cation channel, subfamily C, member 5, [Score=612, Expect=0.0]; ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=584, Expect=0.0]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=568, Expect=0.0]} {Celegans: WBGene00006614, trp-1, Transient-receptor-potential-like protein, [Score=712, Expect=0.0]} {Smed: dd_Smed_v6_15627_0_1, dd_Smed_v6_15627_0_1, [Score=528, Expect=3e-171]} {RNA1509_2270} {RNA1310_93280} {RNA815_44973}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_26481

3439

71.66

Mlig455_012567

Neo: -

Age: Down-Up-Up

Region-enriched R3: 1.055/0.00019

Regeneration-upregulated TP: 1.342

Regeneration-enriched TP: 1.342

1.000

MligTC455_20951

660

13.75

Mlig455_008058

Neo: -

Age: -

TRPC5

0.951

Mlig455_008058 {REF} {Length: 3242} {Pfam: Transient receptor ion channel II [PF08344.13, score=100.6]; Ion transport protein [PF00520.33, score=93.3]; Polycystin cation channel [PF08016.14, score=32.7]; Ankyrin repeats (3 copies) [PF12796.9, score=29.6]; Ankyrin repeat [PF13606.8, score=22.1]; Ankyrin repeats (many copies) [PF13637.8, score=21.3]} {Human: ENSG00000072315, TRPC5, transient receptor potential cation channel subfamily C member 5, [Score=612, Expect=0.0]; ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [Score=585, Expect=0.0]} {Mouse: ENSMUSG00000041710, Trpc5, transient receptor potential cation channel, subfamily C, member 5, [Score=612, Expect=0.0]; ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=584, Expect=0.0]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=568, Expect=0.0]} {Celegans: WBGene00006614, trp-1, Transient-receptor-potential-like protein, [Score=712, Expect=0.0]} {Smed: dd_Smed_v6_15627_0_1, dd_Smed_v6_15627_0_1, [Score=528, Expect=3e-171]} {RNA1509_2270} {RNA1310_93280} {RNA815_44973}