TomoSeq data search

Data search

Results for MligTC455_26536

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26536	1542	32.12	Mlig455_007209, Mlig455_007441	Neo: - Age: -	RABL2A	Mlig455_007209 {REF} {Length: 4845} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=136.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=111.5]; ADP-ribosylation factor family [PF00025.23, score=40.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=30.1]; Gtr1/RagA G protein conserved region [PF04670.14, score=25.6]; 50S ribosome-binding GTPase [PF01926.25, score=22.4]} {Human: ENSG00000144134, RABL2A, RAB, member of RAS oncogene family like 2A, [RH, Score=285, Expect=7e-98]; ENSG00000079974, RABL2B, RAB, member of RAS oncogene family like 2B, [RH, Score=284, Expect=1e-97]} {Mouse: ENSMUSG00000022621, Rabl2, RAB, member RAS oncogene family-like 2, [RH, Score=280, Expect=3e-96]} {Dmel: FBgn0015790, Rab11, [Score=111, Expect=2e-30]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=108, Expect=2e-29]} {Smed: dd_Smed_v6_9251_0_1, dd_Smed_v6_9251_0_1, [RH, Score=318, Expect=3e-112]} {RNA1509_49756} {RNA1310_25276.1} {RNA815_5425.1} Mlig455_007441 {REF} {Length: 2621} {Pfam: Ras family [PF00071.24, score=136.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=111.5]; ADP-ribosylation factor family [PF00025.23, score=40.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=30.1]; Gtr1/RagA G protein conserved region [PF04670.14, score=25.6]; 50S ribosome-binding GTPase [PF01926.25, score=22.4]} {Human: ENSG00000144134, RABL2A, RAB, member of RAS oncogene family like 2A, [RH, Score=285, Expect=7e-98]; ENSG00000079974, RABL2B, RAB, member of RAS oncogene family like 2B, [RH, Score=284, Expect=1e-97]} {Mouse: ENSMUSG00000022621, Rabl2, RAB, member RAS oncogene family-like 2, [RH, Score=280, Expect=3e-96]} {Dmel: FBgn0015790, Rab11, [Score=111, Expect=2e-30]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=108, Expect=2e-29]} {Smed: dd_Smed_v6_9251_0_1, dd_Smed_v6_9251_0_1, [RH, Score=318, Expect=3e-112]} {RNA1509_21447, RNA1509_30330, RNA1509_9675} {RNA1310_25276.1, RNA1509_21447, RNA1509_30330, RNA1509_9675} {RNA1509_21447, RNA1509_30330, RNA1509_9675, RNA815_5425.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26536

1542

32.12

Mlig455_007209, Mlig455_007441

Neo: -

Age: -

RABL2A

Mlig455_007209 {REF} {Length: 4845} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=136.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=111.5]; ADP-ribosylation factor family [PF00025.23, score=40.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=30.1]; Gtr1/RagA G protein conserved region [PF04670.14, score=25.6]; 50S ribosome-binding GTPase [PF01926.25, score=22.4]} {Human: ENSG00000144134, RABL2A, RAB, member of RAS oncogene family like 2A, [RH, Score=285, Expect=7e-98]; ENSG00000079974, RABL2B, RAB, member of RAS oncogene family like 2B, [RH, Score=284, Expect=1e-97]} {Mouse: ENSMUSG00000022621, Rabl2, RAB, member RAS oncogene family-like 2, [RH, Score=280, Expect=3e-96]} {Dmel: FBgn0015790, Rab11, [Score=111, Expect=2e-30]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=108, Expect=2e-29]} {Smed: dd_Smed_v6_9251_0_1, dd_Smed_v6_9251_0_1, [RH, Score=318, Expect=3e-112]} {RNA1509_49756} {RNA1310_25276.1} {RNA815_5425.1}

Mlig455_007441 {REF} {Length: 2621} {Pfam: Ras family [PF00071.24, score=136.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=111.5]; ADP-ribosylation factor family [PF00025.23, score=40.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=30.1]; Gtr1/RagA G protein conserved region [PF04670.14, score=25.6]; 50S ribosome-binding GTPase [PF01926.25, score=22.4]} {Human: ENSG00000144134, RABL2A, RAB, member of RAS oncogene family like 2A, [RH, Score=285, Expect=7e-98]; ENSG00000079974, RABL2B, RAB, member of RAS oncogene family like 2B, [RH, Score=284, Expect=1e-97]} {Mouse: ENSMUSG00000022621, Rabl2, RAB, member RAS oncogene family-like 2, [RH, Score=280, Expect=3e-96]} {Dmel: FBgn0015790, Rab11, [Score=111, Expect=2e-30]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=108, Expect=2e-29]} {Smed: dd_Smed_v6_9251_0_1, dd_Smed_v6_9251_0_1, [RH, Score=318, Expect=3e-112]} {RNA1509_21447, RNA1509_30330, RNA1509_9675} {RNA1310_25276.1, RNA1509_21447, RNA1509_30330, RNA1509_9675} {RNA1509_21447, RNA1509_30330, RNA1509_9675, RNA815_5425.1}

Cumulative graph for MligTC455_26536

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.131	5.205	0.86362	1.00000
RegionR2	0.381	5.205	0.27741	0.66334
RegionR3	0.297	5.205	0.28563	0.82752
RegionR4	0.603	5.205	0.07944	0.26361
RegionR5	0.578	5.205	0.02593	0.11673
RegionR6	-0.556	5.205	0.07063	0.49491
RegionR7	-0.135	5.205	0.70222	1.00000
RegionR8	-1.038	5.205	0.02434	0.30466

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.167	5.205	0.87118	1.00000
RegenerationR2	0.019	5.205	0.95054	1.00000
RegenerationR3	-0.128	5.205	0.70320	0.94883
RegenerationR4	-0.114	5.205	0.74374	0.96887
RegenerationR5	0.065	5.205	0.83969	1.00000
RegenerationR6	-0.056	5.205	0.88096	1.00000
RegenerationBL	0.069	5.205	0.86977	1.00000
RegenerationTP	0.241	5.205	0.58353	0.95209

Genes with expression patterns similar to MligTC455_26536

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26536	1542	32.12	Mlig455_007209, Mlig455_007441	Neo: - Age: -	RABL2A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007209 {REF} {Length: 4845} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=136.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=111.5]; ADP-ribosylation factor family [PF00025.23, score=40.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=30.1]; Gtr1/RagA G protein conserved region [PF04670.14, score=25.6]; 50S ribosome-binding GTPase [PF01926.25, score=22.4]} {Human: ENSG00000144134, RABL2A, RAB, member of RAS oncogene family like 2A, [RH, Score=285, Expect=7e-98]; ENSG00000079974, RABL2B, RAB, member of RAS oncogene family like 2B, [RH, Score=284, Expect=1e-97]} {Mouse: ENSMUSG00000022621, Rabl2, RAB, member RAS oncogene family-like 2, [RH, Score=280, Expect=3e-96]} {Dmel: FBgn0015790, Rab11, [Score=111, Expect=2e-30]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=108, Expect=2e-29]} {Smed: dd_Smed_v6_9251_0_1, dd_Smed_v6_9251_0_1, [RH, Score=318, Expect=3e-112]} {RNA1509_49756} {RNA1310_25276.1} {RNA815_5425.1} Mlig455_007441 {REF} {Length: 2621} {Pfam: Ras family [PF00071.24, score=136.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=111.5]; ADP-ribosylation factor family [PF00025.23, score=40.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=30.1]; Gtr1/RagA G protein conserved region [PF04670.14, score=25.6]; 50S ribosome-binding GTPase [PF01926.25, score=22.4]} {Human: ENSG00000144134, RABL2A, RAB, member of RAS oncogene family like 2A, [RH, Score=285, Expect=7e-98]; ENSG00000079974, RABL2B, RAB, member of RAS oncogene family like 2B, [RH, Score=284, Expect=1e-97]} {Mouse: ENSMUSG00000022621, Rabl2, RAB, member RAS oncogene family-like 2, [RH, Score=280, Expect=3e-96]} {Dmel: FBgn0015790, Rab11, [Score=111, Expect=2e-30]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=108, Expect=2e-29]} {Smed: dd_Smed_v6_9251_0_1, dd_Smed_v6_9251_0_1, [RH, Score=318, Expect=3e-112]} {RNA1509_21447, RNA1509_30330, RNA1509_9675} {RNA1310_25276.1, RNA1509_21447, RNA1509_30330, RNA1509_9675} {RNA1509_21447, RNA1509_30330, RNA1509_9675, RNA815_5425.1}
2.	MligTC455_20635	1082	22.54	Mlig455_038331, Mlig455_050237	Neo: - Age: Down-Up-Down		0.962	-	-	-	0.962	-	-	Mlig455_038331 {REF} {Length: 937} {TRANSSPLICED} {RNA1509_20616} {RNA1310_7539.1} {RNA815_2600.1} Mlig455_050237 {REF} {Length: 937} {TRANSSPLICED} {RNA1509_20616} {RNA1310_7539.1, RNA1509_20616} {RNA1509_20616, RNA815_2600.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts