TomoSeq data search

Data search

Results for MligTC455_26551

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26551

382

7.96

Mlig455_046016

Neo: -

Age: -

FOXP4

Mlig455_046016 {REF} {Length: 4891} {Pfam: Forkhead domain [PF00250.20, score=92.5]; FOXP coiled-coil domain [PF16159.7, score=60.0]; Citrate transporter [PF03600.18, score=18.6]} {Human: ENSG00000137166, FOXP4, forkhead box P4, [RH, Score=191, Expect=5e-52]; ENSG00000128573, FOXP2, forkhead box P2, [RH, Score=186, Expect=4e-50]} {Mouse: ENSMUSG00000023991, Foxp4, forkhead box P4, [RH, Score=192, Expect=9e-53]; ENSMUSG00000116496, Foxp4, forkhead box P4, [RH, Score=192, Expect=9e-53]; ENSMUSG00000029563, Foxp2, forkhead box P2, [RH, Score=186, Expect=3e-50]} {Dmel: FBgn0262477, FoxP, Forkhead box P, [RH, Score=216, Expect=2e-63]} {Celegans: WBGene00001439, fkh-7, ForKHead transcription factor family, [RH, Score=196, Expect=8e-54]} {Smed: dd_Smed_v6_6316_0_1, dd_Smed_v6_6316_0_1, [RH, Score=113, Expect=2e-26]} {RNA1509_18798} {RNA1310_9496.1} {RNA815_1593}

Cumulative graph for MligTC455_26551

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.643	3.334	0.34890	0.99292
RegionR2	0.85	3.334	0.10624	0.40193
RegionR3	0.482	3.334	0.27161	0.81611
RegionR4	0.776	3.334	0.13071	0.36614
RegionR5	-0.544	3.334	0.29061	0.62210
RegionR6	-0.275	3.334	0.60708	1.00000
RegionR7	-0.482	3.334	0.49517	1.00000
RegionR8	0.836	3.334	0.21251	0.81653

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.523	3.334	0.84148	1.00000
RegenerationR2	-0.434	3.334	0.23380	0.68130
RegenerationR3	-0.51	3.334	0.25060	0.68504
RegenerationR4	-0.393	3.334	0.38136	0.80208
RegenerationR5	-0.192	3.334	0.67543	0.94306
RegenerationR6	-0.001	3.334	0.99764	1.00000
RegenerationBL	-1.279	3.334	0.08812	0.34792
RegenerationTP	-0.463	3.334	0.48885	0.89460

Genes with expression patterns similar to MligTC455_26551

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26551	382	7.96	Mlig455_046016	Neo: - Age: -	FOXP4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_046016 {REF} {Length: 4891} {Pfam: Forkhead domain [PF00250.20, score=92.5]; FOXP coiled-coil domain [PF16159.7, score=60.0]; Citrate transporter [PF03600.18, score=18.6]} {Human: ENSG00000137166, FOXP4, forkhead box P4, [RH, Score=191, Expect=5e-52]; ENSG00000128573, FOXP2, forkhead box P2, [RH, Score=186, Expect=4e-50]} {Mouse: ENSMUSG00000023991, Foxp4, forkhead box P4, [RH, Score=192, Expect=9e-53]; ENSMUSG00000116496, Foxp4, forkhead box P4, [RH, Score=192, Expect=9e-53]; ENSMUSG00000029563, Foxp2, forkhead box P2, [RH, Score=186, Expect=3e-50]} {Dmel: FBgn0262477, FoxP, Forkhead box P, [RH, Score=216, Expect=2e-63]} {Celegans: WBGene00001439, fkh-7, ForKHead transcription factor family, [RH, Score=196, Expect=8e-54]} {Smed: dd_Smed_v6_6316_0_1, dd_Smed_v6_6316_0_1, [RH, Score=113, Expect=2e-26]} {RNA1509_18798} {RNA1310_9496.1} {RNA815_1593}
2.	MligTC455_21893	343	7.15	Mlig455_035836	Neo: - Age: - Region-enriched R3: 2.479/0.01289		1.849	-	0.880	-	0.969	-	-	Mlig455_035836 {REF} {Length: 1211} {Pfam: EF hand [PF00036.34, score=28.6]; EF-hand domain [PF13405.8, score=28.6]; EF-hand domain pair [PF13499.8, score=23.1]} {RNA1509_39387} {RNA1310_27472} {RNA815_32728}
3.	MligTC455_31847	661	13.78	Mlig455_025501, Mlig455_070503	Neo: - Age: Down-Up-Down	KCNMA1	1.718	-	0.762	-	-	-	0.956	Mlig455_025501 {REF} {Length: 4552} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=85.2]; Ion channel [PF07885.18, score=43.4]; Ion transport protein [PF00520.33, score=34.6]; TrkA-N domain [PF02254.20, score=22.5]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=488, Expect=4e-154]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=335, Expect=3e-97]} {Dmel: FBgn0003429, slo, slowpoke, [Score=484, Expect=1e-151]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=454, Expect=9e-141]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=476, Expect=1e-149]} {RNA1509_14763} {RNA1310_2844.1} {RNA815_830} Mlig455_070503 {REF} {Length: 4866} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=85.2]; Ion channel [PF07885.18, score=43.4]; Ion transport protein [PF00520.33, score=34.6]; TrkA-N domain [PF02254.20, score=22.5]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=488, Expect=4e-154]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=335, Expect=3e-97]} {Dmel: FBgn0003429, slo, slowpoke, [Score=484, Expect=1e-151]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=454, Expect=9e-141]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=476, Expect=1e-149]} {RNA1509_14763} {RNA1310_2844.1, RNA1509_14763} {RNA1509_14763, RNA815_830}
4.	MligTC455_47637	1168	24.33	Mlig455_041729, Mlig455_042071, Mlig455_042284, Mlig455_042294	Neo: - Age: -		1.68	-	0.730	-	-	-	0.950	Mlig455_041729 {REF} {Length: 2197} {RNA1509_28165} {RNA1310_12730.1} {RNA815_5541.1} Mlig455_042071 {REF} {Length: 2956} {RNA1509_28165} {RNA1310_12730.1} {RNA815_5541.1} Mlig455_042284 {REF} {Length: 2962} {RNA1509_28165} {RNA1310_12730.1} {RNA815_5541.1} Mlig455_042294 {REF} {Length: 2760} {RNA1509_28165} {RNA1310_12730.1, RNA1509_28165} {RNA1509_28165, RNA815_5541.1}
5.	MligTC455_40801	425	8.85	Mlig455_003100, Mlig455_062789	Neo: - Age: logFC(26M/2M)=-0.250 Region-enriched R2: 3.506/0.00053 Region-enriched R3: 2.405/0.00633	MDH1B	1.679	-	0.727	-	-	-	0.952	Mlig455_003100 {REF} {Length: 4802} {Pfam: lactate/malate dehydrogenase, alpha/beta C-terminal domain [PF02866.20, score=53.0]} {Human: ENSG00000138400, MDH1B, malate dehydrogenase 1B, [Score=323, Expect=1e-102]} {Mouse: ENSMUSG00000025963, Mdh1b, malate dehydrogenase 1B, NAD (soluble), [Score=304, Expect=1e-95]} {Dmel: FBgn0262782, Mdh1, Malate dehydrogenase 1, [Score=107, Expect=3e-25]} {Celegans: WBGene00018491, mdh-1, Malate DeHydrogenase, [Score=98.2, Expect=4e-22]} {Smed: dd_Smed_v6_10200_0_1, dd_Smed_v6_10200_0_1, [Score=335, Expect=2e-106]} {RNA1509_47623, RNA1509_9622} {RNA1310_5189, RNA1509_47623} {RNA1509_47623, RNA815_3770} Mlig455_062789 {REF} {Length: 2979} {Pfam: lactate/malate dehydrogenase, alpha/beta C-terminal domain [PF02866.20, score=52.9]} {Human: ENSG00000138400, MDH1B, malate dehydrogenase 1B, [Score=323, Expect=1e-102]} {Mouse: ENSMUSG00000025963, Mdh1b, malate dehydrogenase 1B, NAD (soluble), [Score=304, Expect=1e-95]} {Dmel: FBgn0262782, Mdh1, Malate dehydrogenase 1, [Score=105, Expect=2e-24]} {Celegans: WBGene00018491, mdh-1, Malate DeHydrogenase, [Score=97.8, Expect=5e-22]} {Smed: dd_Smed_v6_10200_0_1, dd_Smed_v6_10200_0_1, [RH, Score=337, Expect=1e-107]} {RNA1509_9622} {RNA1310_5189, RNA1509_9622} {RNA1509_9622, RNA815_3770}
6.	MligTC455_46887	1771	36.89	Mlig455_023150	Neo: - Age: logFC(26M/2M)=-0.580	SLC25A14	0.968	-	-	-	-	-	0.968	Mlig455_023150 {REF} {Length: 2121} {Pfam: Mitochondrial carrier protein [PF00153.29, score=221.0]} {Human: ENSG00000102078, SLC25A14, solute carrier family 25 member 14, [RH, Score=287, Expect=1e-95]; ENSG00000174032, SLC25A30, solute carrier family 25 member 30, [RH, Score=281, Expect=2e-93]} {Mouse: ENSMUSG00000031105, Slc25a14, solute carrier family 25 (mitochondrial carrier, brain), member 14, [RH, Score=284, Expect=2e-94]; ENSMUSG00000022003, Slc25a30, solute carrier family 25, member 30, [RH, Score=281, Expect=9e-94]} {Dmel: FBgn0036199, Bmcp, [RH, Score=259, Expect=8e-85]} {Celegans: WBGene00015186, misc-1, MItochondrial Solute Carrier, [Score=166, Expect=1e-48]} {Smed: dd_Smed_v6_8945_0_8, dd_Smed_v6_8945_0_8, [RH, Score=250, Expect=1e-81]} {RNA1509_12259} {RNA1310_31014} {RNA815_1562.1}
7.	MligTC455_47441	543	11.32	Mlig455_045866	Neo: - Age: -		0.966	-	-	-	-	-	0.966	Mlig455_045866 {REF} {Length: 2993} {TRANSSPLICED} {Smed: dd_Smed_v6_11834_0_1, dd_Smed_v6_11834_0_1, [RH, Score=173, Expect=4e-47]} {RNA1509_34658, RNA1509_4754} {RNA1310_5693.1, RNA1509_34658, RNA1509_4754} {RNA1509_34658, RNA1509_4754, RNA815_2001}
8.	MligTC455_17580	2178	45.37	Mlig455_048028	Neo: - Age: Down-Up-Up		0.96	-	-	-	-	-	0.960	Mlig455_048028 {REF} {Length: 5222} {RNA1509_12558, RNA1509_43882} {RNA1310_10969, RNA1509_43882} {RNA1509_43882, RNA815_3485.1}
9.	MligTC455_43002	147	3.07	Mlig455_004304	Neo: - Age: Up-Down-Down	GLUD1	0.959	-	-	-	-	-	0.959	Mlig455_004304 {REF} {Length: 2088} {Pfam: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase [PF00208.23, score=134.8]} {Human: ENSG00000148672, GLUD1, glutamate dehydrogenase 1, [Score=288, Expect=8e-94]; ENSG00000182890, GLUD2, glutamate dehydrogenase 2, [Score=285, Expect=5e-93]} {Mouse: ENSMUSG00000021794, Glud1, glutamate dehydrogenase 1, [Score=288, Expect=5e-94]} {Dmel: FBgn0001098, Gdh, Glutamate dehydrogenase, [Score=288, Expect=2e-96]} {Celegans: WBGene00014095, gdh-1, Glutamate dehydrogenase, [Score=240, Expect=4e-76]} {Smed: dd_Smed_v6_932_0_1, dd_Smed_v6_932_0_1, [Score=277, Expect=1e-90]} {RNA1509_18938, RNA1509_30743} {RNA1310_2661.2, RNA1509_18938} {RNA1509_18938, RNA815_713.2}
10.	MligTC455_28447	1671	34.81	Mlig455_066308	Neo: - Age: Down-Up-Down		0.958	-	-	-	-	-	0.958	Mlig455_066308 {REF} {Length: 1281} {Pfam: Domain of unknown function (DUF4515) [PF14988.8, score=104.5]} {Mouse: ENSMUSG00000098176, Ccdc166, coiled-coil domain containing 166, [RH, Score=107, Expect=4e-26]} {Smed: dd_Smed_v6_13384_0_1, dd_Smed_v6_13384_0_1, [RH, Score=124, Expect=2e-33]} {RNA1509_33127} {RNA1310_32791.1, RNA1509_33127} {RNA1509_33127, RNA815_15652}
11.	MligTC455_42604	1501	31.27	Mlig455_050777	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.494 Region-enriched R4: 1.958/0.00766		0.956	-	-	-	-	-	0.956	Mlig455_050777 {REF} {Length: 1833} {Pfam: Sleepless protein [PF17064.7, score=31.0]} {Dmel: FBgn0033872, CG6329, [RH, Score=55.8, Expect=3e-10]} {Smed: dd_Smed_v6_780_0_1, dd_Smed_v6_780_0_1, [RH, Score=57.0, Expect=7e-11]} {RNA1509_1909} {RNA1310_24118} {RNA815_21128}
12.	MligTC455_48101	874	18.2	Mlig455_018395, Mlig455_069529	Neo: - Age: Down-Up-Down Region-enriched R2: 1.420/0.02237	LRRC71	0.956	-	-	-	-	-	0.956	Mlig455_018395 {REF} {Length: 2255} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=67.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=25.6]; Leucine Rich Repeat [PF00560.35, score=24.4]} {Human: ENSG00000160838, LRRC71, leucine rich repeat containing 71, [RH, Score=199, Expect=3e-56]} {Mouse: ENSMUSG00000023084, Lrrc71, leucine rich repeat containing 71, [RH, Score=195, Expect=4e-55]} {Smed: dd_Smed_v6_12043_0_2, dd_Smed_v6_12043_0_2, [RH, Score=230, Expect=1e-69]} {RNA1509_18089} {RNA1310_2341.2} {RNA815_677.1} Mlig455_069529 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=66.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=25.2]; Leucine Rich Repeat [PF00560.35, score=24.2]} {Human: ENSG00000160838, LRRC71, leucine rich repeat containing 71, [RH, Score=202, Expect=2e-57]} {Mouse: ENSMUSG00000023084, Lrrc71, leucine rich repeat containing 71, [RH, Score=198, Expect=4e-56]} {Smed: dd_Smed_v6_12043_0_2, dd_Smed_v6_12043_0_2, [RH, Score=227, Expect=2e-68]} {RNA1509_18089} {RNA1310_2341.2, RNA1509_18089} {RNA1509_18089, RNA815_677.1}
13.	MligTC455_25975	469	9.78	Mlig455_009607	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_009607 {REF} {Length: 2507} {RNA1509_19384} {RNA1310_17198.1} {RNA815_5584.1}
14.	MligTC455_29732	484	10.08	Mlig455_028057	Neo: - Age: -	XDH	0.954	-	-	-	-	-	0.954	Mlig455_028057 {REF} {Length: 4798} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=606.8]; FAD binding domain in molybdopterin dehydrogenase [PF00941.23, score=154.0]; [2Fe-2S] binding domain [PF01799.22, score=101.5]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.19, score=92.5]; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain [PF01315.24, score=84.2]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=25.2]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [RH, Score=1202, Expect=0.0]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [RH, Score=1184, Expect=0.0]} {Dmel: FBgn0003308, ry, rosy, [RH, Score=1229, Expect=0.0]} {Celegans: WBGene00010083, xhd-1, [RH, Score=1093, Expect=0.0]} {RNA1509_54186, RNA1509_5759} {RNA1310_1612.1, RNA1509_54186, RNA1509_5759} {RNA1509_54186, RNA1509_5759, RNA815_3017}
15.	MligTC455_31846	149	3.11	Mlig455_068643	Neo: - Age: -	LRRC7	0.954	-	-	-	-	-	0.954	Mlig455_068643 {REF} {Length: 4432} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=123.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=68.5]; PDZ domain [PF00595.26, score=46.1]; PDZ domain [PF17820.3, score=22.3]} {Human: ENSG00000033122, LRRC7, leucine rich repeat containing 7, [RH, Score=356, Expect=2e-102]} {Mouse: ENSMUSG00000028176, Lrrc7, leucine rich repeat containing 7, [RH, Score=362, Expect=3e-105]} {Dmel: FBgn0033984, Lap1, [RH, Score=295, Expect=6e-85]} {Celegans: WBGene00002632, let-413, [Score=296, Expect=5e-87]} {Smed: dd_Smed_v6_4770_0_1, dd_Smed_v6_4770_0_1, [RH, Score=317, Expect=1e-91]} {RNA1509_38652} {RNA1310_6256} {RNA815_10502}
16.	MligTC455_48867	274	5.71	Mlig455_052014	Neo: - Age: -	CAPS2	0.954	-	-	-	-	-	0.954	Mlig455_052014 {REF} {Length: 3413} {TRANSSPLICED} {Human: ENSG00000180881, CAPS2, calcyphosine 2, [RH, Score=207, Expect=4e-60]} {Mouse: ENSMUSG00000035694, Caps2, calcyphosphine 2, [RH, Score=225, Expect=6e-65]} {Dmel: FBgn0051345, CG31345, [Score=63.5, Expect=5e-11]} {Smed: dd_Smed_v6_7209_0_1, dd_Smed_v6_7209_0_1, [Score=70.9, Expect=7e-14]} {RNA1509_44692} {RNA1310_9646.2, RNA1509_44692} {RNA1509_44692, RNA815_2138.1}
17.	MligTC455_19465	216	4.5	Mlig455_011567	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.898 Region-enriched R2: 2.709/0.02014	LRRC69	0.952	-	-	-	-	-	0.952	Mlig455_011567 {REF} {Length: 2449} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=92.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=80.1]; Leucine Rich repeat [PF13516.8, score=33.3]; Leucine Rich Repeat [PF00560.35, score=27.4]} {Human: ENSG00000214954, LRRC69, leucine rich repeat containing 69, [RH, Score=198, Expect=7e-60]} {Mouse: ENSMUSG00000023151, Lrrc69, leucine rich repeat containing 69, [RH, Score=218, Expect=1e-67]} {Dmel: FBgn0033984, Lap1, [Score=105, Expect=3e-24]} {Celegans: WBGene00002632, let-413, [Score=112, Expect=8e-27]} {Smed: dd_Smed_v6_14722_0_1, dd_Smed_v6_14722_0_1, [RH, Score=184, Expect=5e-56]} {RNA1509_41102} {RNA1310_3215.1} {RNA815_13052}
18.	MligTC455_21297	546	11.38	Mlig455_033973	Neo: Germline Age: Up-Down-Up		0.952	-	-	-	-	-	0.952	Mlig455_033973 {REF} {Length: 4638} {RNA1509_49102} {RNA1310_24684} {RNA815_56598}

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