TomoSeq data search

Data search

Results for MligTC455_26557

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26557	1857	38.69	Mlig455_067419, Mlig455_069559	Neo: - Age: -	SRSF7	Mlig455_067419 {REF} {Length: 2515} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=39.7]; Zinc knuckle [PF00098.25, score=29.8]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [Score=92.8, Expect=2e-21]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [Score=92.8, Expect=1e-21]} {Dmel: FBgn0028554, x16, x16 splicing factor, [Score=91.3, Expect=5e-21]} {Celegans: WBGene00004703, rsp-6, Probable splicing factor, arginine/serine-rich 6, [Score=64.7, Expect=3e-12]} {Smed: dd_Smed_v6_2236_0_2, dd_Smed_v6_2236_0_2, [Score=71.2, Expect=2e-14]} {RNA1509_14126} {RNA1310_40809} {RNA815_11929} Mlig455_069559 {REF} {Length: 2571} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=39.7]; Zinc knuckle [PF00098.25, score=29.8]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [Score=92.8, Expect=2e-21]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [Score=92.8, Expect=9e-22]} {Dmel: FBgn0028554, x16, x16 splicing factor, [Score=91.3, Expect=5e-21]} {Celegans: WBGene00004703, rsp-6, Probable splicing factor, arginine/serine-rich 6, [Score=64.7, Expect=3e-12]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [Score=69.3, Expect=2e-14]} {RNA1509_14126, RNA1509_20036, RNA1509_37978} {RNA1310_40809, RNA1509_20036, RNA1509_37978} {RNA1509_20036, RNA1509_37978, RNA815_11929}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26557

1857

38.69

Mlig455_067419, Mlig455_069559

Neo: -

Age: -

SRSF7

Mlig455_067419 {REF} {Length: 2515} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=39.7]; Zinc knuckle [PF00098.25, score=29.8]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [Score=92.8, Expect=2e-21]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [Score=92.8, Expect=1e-21]} {Dmel: FBgn0028554, x16, x16 splicing factor, [Score=91.3, Expect=5e-21]} {Celegans: WBGene00004703, rsp-6, Probable splicing factor, arginine/serine-rich 6, [Score=64.7, Expect=3e-12]} {Smed: dd_Smed_v6_2236_0_2, dd_Smed_v6_2236_0_2, [Score=71.2, Expect=2e-14]} {RNA1509_14126} {RNA1310_40809} {RNA815_11929}

Mlig455_069559 {REF} {Length: 2571} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=39.7]; Zinc knuckle [PF00098.25, score=29.8]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [Score=92.8, Expect=2e-21]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [Score=92.8, Expect=9e-22]} {Dmel: FBgn0028554, x16, x16 splicing factor, [Score=91.3, Expect=5e-21]} {Celegans: WBGene00004703, rsp-6, Probable splicing factor, arginine/serine-rich 6, [Score=64.7, Expect=3e-12]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [Score=69.3, Expect=2e-14]} {RNA1509_14126, RNA1509_20036, RNA1509_37978} {RNA1310_40809, RNA1509_20036, RNA1509_37978} {RNA1509_20036, RNA1509_37978, RNA815_11929}

Cumulative graph for MligTC455_26557

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.95	5.497	0.01209	0.31708
RegionR2	0.85	5.497	0.05923	0.29310
RegionR3	0.613	5.497	0.10947	0.57601
RegionR4	0.527	5.497	0.23302	0.52705
RegionR5	0.152	5.497	0.67696	1.00000
RegionR6	0.242	5.497	0.52611	1.00000
RegionR7	0.554	5.497	0.16513	0.74986
RegionR8	0.011	5.497	0.97818	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.826	5.497	0.29784	0.99429
RegenerationR2	0.285	5.497	0.45849	0.85162
RegenerationR3	0.035	5.497	0.93482	1.00000
RegenerationR4	0.548	5.497	0.21690	0.66396
RegenerationR5	0.353	5.497	0.39512	0.79493
RegenerationR6	0.781	5.497	0.06456	0.31904
RegenerationBL	0.165	5.497	0.70336	1.00000
RegenerationTP	0.241	5.497	0.59713	0.95918

Genes with expression patterns similar to MligTC455_26557

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26557	1857	38.69	Mlig455_067419, Mlig455_069559	Neo: - Age: -	SRSF7	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_067419 {REF} {Length: 2515} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=39.7]; Zinc knuckle [PF00098.25, score=29.8]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [Score=92.8, Expect=2e-21]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [Score=92.8, Expect=1e-21]} {Dmel: FBgn0028554, x16, x16 splicing factor, [Score=91.3, Expect=5e-21]} {Celegans: WBGene00004703, rsp-6, Probable splicing factor, arginine/serine-rich 6, [Score=64.7, Expect=3e-12]} {Smed: dd_Smed_v6_2236_0_2, dd_Smed_v6_2236_0_2, [Score=71.2, Expect=2e-14]} {RNA1509_14126} {RNA1310_40809} {RNA815_11929} Mlig455_069559 {REF} {Length: 2571} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=39.7]; Zinc knuckle [PF00098.25, score=29.8]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [Score=92.8, Expect=2e-21]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [Score=92.8, Expect=9e-22]} {Dmel: FBgn0028554, x16, x16 splicing factor, [Score=91.3, Expect=5e-21]} {Celegans: WBGene00004703, rsp-6, Probable splicing factor, arginine/serine-rich 6, [Score=64.7, Expect=3e-12]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [Score=69.3, Expect=2e-14]} {RNA1509_14126, RNA1509_20036, RNA1509_37978} {RNA1310_40809, RNA1509_20036, RNA1509_37978} {RNA1509_20036, RNA1509_37978, RNA815_11929}
2.	MligTC455_28511	816	16.99	Mlig455_023841	Neo: - Age: logFC(26M/2M)=0.292		0.965	-	-	-	0.965	-	-	Mlig455_023841 {REF} {Length: 2250} {TRANSSPLICED} {RNA1509_30003} {RNA1310_22121.1} {RNA815_3925.2}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts