Data search


search
Exact
Search

Results for MligTC455_26571

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_26571 31 0.64 Mlig455_030339

Neo: -

Age: -

Region-enriched R4: 6.733/0.01716

Mlig455_030339 {REF} {Length: 463} {NoTransDecoderORF} {RNA1310_34310} {RNA815_7085}

Cumulative graph for MligTC455_26571

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.827 1.018 0.99956 1.00000
RegionR2 -2.49 1.018 0.96998 1.00000
RegionR3 0.139 1.018 0.73096 1.00000
RegionR4 6.733 1.018 0.00189 0.01716
RegionR5 1.569 1.018 0.38072 0.73499
RegionR6 -1.843 1.018 1.00000 1.00000
RegionR7 -1.899 1.018 0.99998 1.00000
RegionR8 -1.383 1.018 0.99969 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.085 1.018 0.99976 1.00000
RegenerationR2 0.96 1.018 0.51314 0.87719
RegenerationR3 -0.834 1.018 0.56673 0.89229
RegenerationR4 -1.567 1.018 0.32243 0.76055
RegenerationR5 -2.059 1.018 0.39222 0.79390
RegenerationR6 2.44 1.018 0.29080 0.64104
RegenerationBL -1.2 1.018 1.00000 1.00000
RegenerationTP 1.872 1.018 0.64101 0.98382


Genes with expression patterns similar to MligTC455_26571

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_26571 31 0.64 Mlig455_030339

Neo: -

Age: -

Region-enriched R4: 6.733/0.01716

3 - - - 1.000 1.000 1.000 Mlig455_030339 {REF} {Length: 463} {NoTransDecoderORF} {RNA1310_34310} {RNA815_7085}
2. MligTC455_00404 6 0.12 Mlig455_021809

Neo: -

Age: -

0.988 - - - - 0.988 - Mlig455_021809 {REF} {Length: 2141} {Pfam: Essential protein Yae1, N terminal [PF09811.11, score=41.6]} {RNA1310_38198}
3. MligTC455_36394 27 0.56 Mlig455_022471

Neo: -

Age: -

KREMEN2 0.968 - - - - 0.968 - Mlig455_022471 {REF} {Length: 1460} {Pfam: WSC domain [PF01822.21, score=44.5]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=51.2, Expect=5e-07]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=49.3, Expect=2e-06]} {RNA1310_89673} {RNA815_64813}
4. MligTC455_33131 549 11.45 Mlig455_022594, Mlig455_026005, Mlig455_070429

Neo: Germline

Age: logFC(26M/2M)=-0.432

KY 0.964 - - - 0.964 - -

Mlig455_022594 {REF} {Length: 667} {Pfam: Helix-turn-helix domain of transposase family ISL3 [PF13542.8, score=27.8]} {RNA1509_53064} {RNA1310_18119} {RNA815_4493}

Mlig455_026005 {REF} {Length: 5002} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=25.4]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=94.7, Expect=2e-19]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=95.5, Expect=1e-19]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=105, Expect=1e-22]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=105, Expect=2e-23]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=111, Expect=1e-24]} {RNA1509_11170} {RNA1310_2597.1} {RNA815_17158}

Mlig455_070429 {REF} {Length: 5697} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=25.4]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=97.4, Expect=5e-20]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=96.7, Expect=6e-20]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=113, Expect=4e-25]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=113, Expect=3e-25]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=113, Expect=4e-25]} {RNA1509_11170, RNA1509_29877} {RNA1310_2597.1, RNA1509_11170, RNA1509_29877} {RNA1509_11170, RNA1509_29877, RNA815_3609}
5. MligTC455_20417 92 1.91 Mlig455_001928

Neo: -

Age: -

0.963 - - - 0.963 - - Mlig455_001928 {REF} {Length: 569} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45067} {RNA1310_7045.1} {RNA815_16809}
6. MligTC455_07318 34 0.72 Mlig455_056720, Mlig455_060298

Neo: -

Age: -

Region-enriched R2: 11.278/0.00008

Regeneration-downregulated R2: -4.848

Regeneration-depleted R2: -4.848

0.96 - - - - 0.960 -

Mlig455_056720 {REF} {Length: 2957} {RNA1310_123874} {RNA815_45268}

Mlig455_060298 {REF} {Length: 3078} {RNA1310_82897} {RNA815_45268}
7. MligTC455_33891 42 0.88 Mlig455_066091

Neo: -

Age: -

0.959 - - - 0.959 - - Mlig455_066091 {REF} {Length: 263} {NoTransDecoderORF} {RNA1509_22875} {RNA1310_33397} {RNA815_53515}
8. MligTC455_40439 37 0.77 Mlig455_012713

Neo: -

Age: -

0.957 - - - - 0.957 - Mlig455_012713 {REF} {Length: 1435} {RNA1310_66735} {RNA815_63406}
9. MligTC455_22916 416 8.67 Mlig455_002448, Mlig455_002725, Mlig455_063340

Neo: -

Age: -

CNOT6, CNOT6L 0.956 - - - 0.956 - -

Mlig455_002448 {REF} {Length: 3594} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=28.2]} {Human: ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [Score=203, Expect=4e-58]; ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [Score=200, Expect=6e-58]} {Mouse: ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [Score=199, Expect=6e-57]; ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [Score=198, Expect=2e-57]} {Dmel: FBgn0011725, twin, [Score=214, Expect=2e-62]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [Score=170, Expect=1e-47]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=162, Expect=1e-43]} {RNA1509_32917} {RNA1310_10507} {RNA815_11288}

Mlig455_002725 {REF} {Length: 3721} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=67.4]} {Human: ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [Score=286, Expect=2e-88]; ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [Score=285, Expect=6e-88]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [Score=285, Expect=4e-88]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [Score=283, Expect=1e-87]} {Dmel: FBgn0011725, twin, [Score=307, Expect=7e-97]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [Score=250, Expect=4e-77]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=258, Expect=4e-78]} {RNA1509_32917} {RNA1310_10507} {RNA815_11288}

Mlig455_063340 {REF} {Length: 4128} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=67.6]} {Human: ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [Score=285, Expect=6e-88]; ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [Score=284, Expect=1e-87]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [Score=283, Expect=1e-87]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [Score=282, Expect=4e-87]} {Dmel: FBgn0011725, twin, [Score=307, Expect=5e-97]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [Score=254, Expect=2e-78]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=256, Expect=4e-77]} {RNA1509_32917} {RNA1310_10507} {RNA815_11288}
10. MligTC455_54033 291 6.06 Mlig455_058457

Neo: -

Age: logFC(26M/2M)=3.997

0.956 - - - 0.956 - - Mlig455_058457 {REF} {Length: 1992} {Pfam: EF hand [PF00036.34, score=41.1]; EF-hand domain pair [PF13499.8, score=40.7]; EF-hand domain [PF13405.8, score=35.8]; EF-hand domain pair [PF13833.8, score=30.7]; EF hand [PF13202.8, score=18.7]} {RNA1509_14169} {RNA1310_23284.1} {RNA815_6643.1}
11. MligTC455_10770 9 0.19 Mlig455_069191

Neo: -

Age: -

NEFM 0.955 - - - - 0.955 - Mlig455_069191 {REF} {Length: 2284} {Human: ENSG00000104722, NEFM, neurofilament medium, [Score=50.8, Expect=6e-06]}
12. MligTC455_50996 449 9.36 Mlig455_002019

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=-0.319

Region-enriched R2: 1.520/0.04245

TRIM71 0.954 - - - 0.954 - - Mlig455_002019 {REF} {Length: 2281} {Pfam: NHL repeat [PF01436.23, score=74.6]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=79.3, Expect=3e-15]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=76.3, Expect=3e-14]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=79.7, Expect=2e-15]; ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=76.3, Expect=2e-14]} {Dmel: FBgn0265356, tn, thin, [Score=94.0, Expect=3e-20]} {Celegans: WBGene00003026, lin-41, [Score=80.5, Expect=5e-16]} {Smed: dd_Smed_v6_13659_0_1, dd_Smed_v6_13659_0_1, [RH, Score=102, Expect=2e-24]} {RNA1509_17378} {RNA1310_19512.1, RNA1509_17378} {RNA1509_17378, RNA815_7968}
13. MligTC455_53417 2924 60.91 Mlig455_006633

Neo: -

Age: logFC(26M/2M)=-0.635

ZBTB46 0.954 - - - 0.954 - - Mlig455_006633 {REF} {Length: 4244} {Pfam: BTB/POZ domain [PF00651.33, score=45.4]; NPH3 family [PF03000.16, score=40.0]} {Human: ENSG00000130584, ZBTB46, zinc finger and BTB domain containing 46, [Score=51.6, Expect=3e-06]; ENSG00000160062, ZBTB8A, zinc finger and BTB domain containing 8A, [Score=51.2, Expect=3e-06]; ENSG00000117153, KLHL12, kelch like family member 12, [Score=49.3, Expect=1e-05]} {Mouse: ENSMUSG00000026455, Klhl12, kelch-like 12, [Score=50.8, Expect=4e-06]; ENSMUSG00000028807, Zbtb8a, zinc finger and BTB domain containing 8a, [Score=49.7, Expect=7e-06]; ENSMUSG00000027583, Zbtb46, zinc finger and BTB domain containing 46, [Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_8081_0_1, dd_Smed_v6_8081_0_1, [Score=216, Expect=2e-62]} {RNA1509_2983} {RNA1310_20884} {RNA815_5532.1}
14. MligTC455_33879 299 6.24 Mlig455_055596, Mlig455_055626, Mlig455_066008

Neo: -

Age: -

Region-enriched R2: 3.126/0.00040
Region-enriched R3: 2.201/0.00953

0.953 - - - 0.953 - -

Mlig455_055596 {REF} {Length: 1506} {RNA1509_26458} {RNA1310_20714, RNA1509_26458} {RNA1509_26458, RNA815_9859}

Mlig455_055626 {REF} {Length: 1412} {RNA1509_26458} {RNA1310_20714} {RNA815_9859}

Mlig455_066008 {REF} {Length: 1365} {RNA1509_26458} {RNA1310_20714} {RNA815_9859}
15. MligTC455_38578 34 0.71 Mlig455_039970, Mlig455_070840

Neo: -

Age: -

0.951 - - - - 0.951 -

Mlig455_039970 {REF} {Length: 1523} {TRANSSPLICED} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=21.3]} {RNA1310_21615.2} {RNA815_35576}

Mlig455_070840 {REF} {Length: 1809} {TRANSSPLICED} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=21.3]} {RNA1310_21615.1} {RNA815_35576}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA