Data search
Results for MligTC455_26625
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_26625 | 416 | 8.67 | Mlig455_043569 | Neo: - Age: - |
Mlig455_043569 {REF} {Length: 4073} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=27.7]; Protein kinase domain [PF00069.27, score=20.1]} {Mouse: ENSMUSG00000032440, Tgfbr2, transforming growth factor, beta receptor II, [Score=61.2, Expect=1e-09]} {Dmel: FBgn0024179, wit, wishful thinking, [Score=65.1, Expect=6e-11]} {RNA1509_41648} {RNA1310_10388} {RNA815_8729} |
Cumulative graph for MligTC455_26625
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.959 | 3.521 | 0.44142 | 1.00000 | |
| RegionR2 | 0.039 | 3.521 | 0.94221 | 1.00000 | |
| RegionR3 | -0.335 | 3.521 | 0.42554 | 0.94693 | |
| RegionR4 | 0.289 | 3.521 | 0.57733 | 0.89442 | |
| RegionR5 | 0.192 | 3.521 | 0.60253 | 0.95989 | |
| RegionR6 | -0.556 | 3.521 | 0.21516 | 0.79310 | |
| RegionR7 | -0.492 | 3.521 | 0.42925 | 1.00000 | |
| RegionR8 | -0.097 | 3.521 | 0.90012 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.33 | 3.521 | 0.82077 | 1.00000 | |
| RegenerationR2 | 0.269 | 3.521 | 0.47679 | 0.86169 | |
| RegenerationR3 | -0.647 | 3.521 | 0.16988 | 0.60487 | |
| RegenerationR4 | -0.629 | 3.521 | 0.19369 | 0.63821 | |
| RegenerationR5 | -0.305 | 3.521 | 0.45341 | 0.83251 | |
| RegenerationR6 | 0.345 | 3.521 | 0.46806 | 0.78293 | |
| RegenerationBL | -1.842 | 3.521 | 0.02732 | 0.18298 | |
| RegenerationTP | -1.2 | 3.521 | 0.12431 | 0.53464 |
Genes with expression patterns similar to MligTC455_26625
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_26625 | 416 | 8.67 | Mlig455_043569 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_043569 {REF} {Length: 4073} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=27.7]; Protein kinase domain [PF00069.27, score=20.1]} {Mouse: ENSMUSG00000032440, Tgfbr2, transforming growth factor, beta receptor II, [Score=61.2, Expect=1e-09]} {Dmel: FBgn0024179, wit, wishful thinking, [Score=65.1, Expect=6e-11]} {RNA1509_41648} {RNA1310_10388} {RNA815_8729} | |
| 2. | MligTC455_53322 | 735 | 15.31 | Mlig455_022544, Mlig455_063672 | Neo: - Age: - |
1.842 | 0.892 | - | - | - | - | 0.950 | Mlig455_022544 {REF} {Length: 4532} {TRANSSPLICED} {RNA1509_52451, RNA1509_55405} {RNA1310_11791.1, RNA1509_52451, RNA1509_55405} {RNA1509_52451, RNA1509_55405, RNA815_14672} Mlig455_063672 {REF} {Length: 6465} {TRANSSPLICED} {RNA1509_52451} {RNA1310_11791.1} {RNA815_14672} |
|
| 3. | MligTC455_16505 | 982 | 20.45 | Mlig455_033587, Mlig455_062874, Mlig455_067030 | Neo: - Age: - |
SERINC3 | 1.718 | - | - | - | 0.955 | - | 0.763 | Mlig455_033587 {REF} {Length: 3032} {TRANSSPLICED} {Pfam: Serine incorporator (Serinc) [PF03348.17, score=489.4]} {Human: ENSG00000132824, SERINC3, serine incorporator 3, [RH, Score=400, Expect=9e-136]} {Mouse: ENSMUSG00000017707, Serinc3, serine incorporator 3, [RH, Score=353, Expect=1e-117]} {Dmel: FBgn0028399, TMS1, [Score=319, Expect=2e-104]} {Celegans: WBGene00021956, Y57E12AL.1, [Score=346, Expect=3e-115]} {Smed: dd_Smed_v6_1130_0_1, dd_Smed_v6_1130_0_1, [Score=460, Expect=1e-159]} {RNA1509_12228} {RNA1310_17866} {RNA815_3387.1} Mlig455_062874 {REF} {Length: 3035} {TRANSSPLICED} {Pfam: Serine incorporator (Serinc) [PF03348.17, score=489.4]} {Human: ENSG00000132824, SERINC3, serine incorporator 3, [RH, Score=400, Expect=9e-136]} {Mouse: ENSMUSG00000017707, Serinc3, serine incorporator 3, [RH, Score=353, Expect=1e-117]} {Dmel: FBgn0028399, TMS1, [Score=319, Expect=2e-104]} {Celegans: WBGene00021956, Y57E12AL.1, [Score=346, Expect=3e-115]} {Smed: dd_Smed_v6_1130_0_1, dd_Smed_v6_1130_0_1, [Score=460, Expect=1e-159]} {RNA1509_12228} {RNA1310_17866} {RNA815_3387.1} Mlig455_067030 {REF} {Length: 2633} {TRANSSPLICED} {Pfam: Serine incorporator (Serinc) [PF03348.17, score=489.4]} {Human: ENSG00000132824, SERINC3, serine incorporator 3, [RH, Score=400, Expect=9e-136]} {Mouse: ENSMUSG00000017707, Serinc3, serine incorporator 3, [RH, Score=353, Expect=1e-117]} {Dmel: FBgn0028399, TMS1, [Score=319, Expect=2e-104]} {Celegans: WBGene00021956, Y57E12AL.1, [Score=346, Expect=3e-115]} {Smed: dd_Smed_v6_1130_0_1, dd_Smed_v6_1130_0_1, [Score=460, Expect=1e-159]} {RNA1509_12228} {RNA1310_17866} {RNA815_3387.1} |
| 4. | MligTC455_41359 | 123 | 2.57 | Mlig455_030736 | Neo: - Age: Down-Down-Up |
0.965 | - | - | - | 0.965 | - | - | Mlig455_030736 {REF} {Length: 1556} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=38.8]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=110, Expect=3e-28]} {RNA1509_39040} {RNA1310_25329.1} {RNA815_29524} | |
| 5. | MligTC455_36285 | 232 | 4.84 | Mlig455_049585 | Neo: - Age: - Region-enriched R2: 2.764/0.02680 |
SGSM1 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_049585 {REF} {Length: 3668} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=117.8]; Rab-binding domain (RBD) [PF12068.10, score=107.7]; RUN domain [PF02759.21, score=79.1]} {Human: ENSG00000167037, SGSM1, small G protein signaling modulator 1, [RH, Score=428, Expect=4e-132]} {Mouse: ENSMUSG00000038351, Sgsm2, small G protein signaling modulator 2, [RH, Score=637, Expect=0.0]} {Dmel: FBgn0031116, CG1695, [RH, Score=432, Expect=5e-133]} {Celegans: WBGene00008018, tbc-8, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=421, Expect=2e-131]} {Smed: dd_Smed_v6_12130_0_1, dd_Smed_v6_12130_0_1, [RH, Score=609, Expect=0.0]} {RNA1509_48678} {RNA1310_9224, RNA1509_48678} {RNA1509_48678, RNA815_14977} |
| 6. | MligTC455_21983 | 1453 | 30.28 | Mlig455_071134 | Neo: - Age: logFC(26M/2M)=-0.466 Region-enriched R4: 2.137/0.03671 |
FAM166B | 0.956 | - | - | - | 0.956 | - | - | Mlig455_071134 {REF} {Length: 1993} {Pfam: Protein of unknown function (DUF2475) [PF10629.11, score=86.2]} {Human: ENSG00000215187, FAM166B, family with sequence similarity 166 member B, [RH, Score=76.3, Expect=2e-15]} {Mouse: ENSMUSG00000042788, Fam166b, family with sequence similarity 166, member B, [RH, Score=72.8, Expect=2e-14]} {Dmel: FBgn0033610, CG18335, [Score=52.4, Expect=2e-07]} {Smed: dd_Smed_v6_5010_0_1, dd_Smed_v6_5010_0_1, [RH, Score=266, Expect=5e-88]} {RNA1509_4972} {RNA1310_18908} {RNA815_6281.1} |
| 7. | MligTC455_15980 | 406 | 8.46 | Mlig455_013591 | Neo: - Age: Down-Up-Down Regeneration-downregulated R2: -2.333 Regeneration-depleted R2: -2.333 |
DTX3 | 0.953 | 0.953 | - | - | - | - | - | Mlig455_013591 {REF} {Length: 2199} {Pfam: Deltex C-terminal domain [PF18102.3, score=160.6]} {Human: ENSG00000178498, DTX3, deltex E3 ubiquitin ligase 3, [RH, Score=171, Expect=2e-47]} {Mouse: ENSMUSG00000040415, Dtx3, deltex 3, E3 ubiquitin ligase, [RH, Score=172, Expect=4e-48]} {Dmel: FBgn0000524, dx, deltex, [RH, Score=112, Expect=9e-26]} {RNA1509_9227} {RNA1310_163.1} {RNA815_1571} |
| 8. | MligTC455_24038 | 340 | 7.07 | Mlig455_048014 | Neo: - Age: - |
RERE | 0.952 | - | - | 0.952 | - | - | - | Mlig455_048014 {REF} {Length: 4737} {TRANSSPLICED} {Pfam: BAH domain [PF01426.20, score=55.1]; ELM2 domain [PF01448.26, score=39.2]; MICOS complex subunit MIC19/MIC25 [PF05300.13, score=20.8]} {Human: ENSG00000142599, RERE, arginine-glutamic acid dipeptide repeats, [Score=220, Expect=4e-59]} {Mouse: ENSMUSG00000039852, Rere, arginine glutamic acid dipeptide (RE) repeats, [Score=220, Expect=2e-59]} {Dmel: FBgn0010825, Gug, Grunge, [RH, Score=139, Expect=3e-33]} {Celegans: WBGene00001194, egl-27, Egg-laying defective protein 27, [Score=142, Expect=1e-34]} {Smed: dd_Smed_v6_6341_0_1, dd_Smed_v6_6341_0_1, [Score=166, Expect=4e-42]} {RNA1509_16176} {RNA1310_4316, RNA1509_16176} {RNA1509_16176, RNA815_10788} |
| 9. | MligTC455_19031 | 449 | 9.36 | Mlig455_017133 | Neo: - Age: Down-Up-Down |
BAG3 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_017133 {REF} {Length: 3000} {Pfam: WW domain [PF00397.28, score=37.8]; CUE domain [PF02845.18, score=28.5]} {Human: ENSG00000151929, BAG3, BCL2 associated athanogene 3, [Score=58.5, Expect=2e-08]; ENSG00000113645, WWC1, WW and C2 domain containing 1, [Score=56.6, Expect=8e-08]} {Mouse: ENSMUSG00000027803, Wwtr1, WW domain containing transcription regulator 1, [RH, Score=52.8, Expect=7e-07]} {Dmel: FBgn0262127, kibra, [Score=55.5, Expect=1e-07]} {Celegans: WBGene00008748, yap-1, Yes-associated protein homolog 1, [Score=53.1, Expect=3e-07]} {Smed: dd_Smed_v6_5261_0_1, dd_Smed_v6_5261_0_1, [RH, Score=67.8, Expect=2e-12]} {RNA1509_15169, RNA1509_49194, RNA1509_51048, RNA1509_59260} {RNA1310_16519, RNA1509_15169, RNA1509_49194, RNA1509_51048, RNA1509_59260} {RNA1509_15169, RNA1509_49194, RNA1509_51048, RNA1509_59260, RNA815_7563} |
| 10. | MligTC455_47108 | 471 | 9.81 | Mlig455_055357, Mlig455_055414 | Neo: - Age: - Region-enriched R6: 2.574/0.00468 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_055357 {REF} {Length: 972} {RNA1509_22152} {RNA1310_38930.1} {RNA815_40776} Mlig455_055414 {REF} {Length: 940} {RNA1509_22152} {RNA1310_38930.1, RNA1509_22152} {RNA1509_22152, RNA815_40776} |
|
| 11. | MligTC455_20574 | 3347 | 69.74 | Mlig455_021418 | Neo: - Age: - |
PCSK2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_021418 {REF} {Length: 1212} {Pfam: Peptidase S8 pro-domain [PF16470.7, score=47.7]} {Human: ENSG00000125851, PCSK2, proprotein convertase subtilisin/kexin type 2, [Score=53.9, Expect=2e-08]} {Mouse: ENSMUSG00000027419, Pcsk2, proprotein convertase subtilisin/kexin type 2, [Score=52.8, Expect=4e-08]} {Dmel: FBgn0023179, amon, amontillado, [Score=55.8, Expect=2e-09]} {Celegans: WBGene00001172, egl-3, Neuroendocrine convertase 2, [Score=61.2, Expect=3e-11]} {Smed: dd_Smed_v6_1566_0_1, dd_Smed_v6_1566_0_1, [Score=65.1, Expect=1e-12]} {RNA1509_15978} {RNA1310_7333.1} {RNA815_2403.2} |
| 12. | MligTC455_21861 | 166 | 3.46 | Mlig455_001636 | Neo: - Age: - |
FAM234B | 0.95 | - | - | - | 0.950 | - | - | Mlig455_001636 {REF} {Length: 2805} {Pfam: FG-GAP-like repeat [PF13517.8, score=32.1]; PQQ-like domain [PF13360.8, score=26.1]; PQQ enzyme repeat [PF01011.23, score=25.0]} {Human: ENSG00000084444, FAM234B, family with sequence similarity 234 member B, [RH, Score=60.8, Expect=7e-09]} {Mouse: ENSMUSG00000030207, Fam234b, family with sequence similarity 234, member B, [RH, Score=62.8, Expect=1e-09]} {Dmel: FBgn0038725, CG6184, [Score=192, Expect=2e-50]} {Smed: dd_Smed_v6_12614_0_1, dd_Smed_v6_12614_0_1, [Score=239, Expect=5e-67]} {RNA1509_34189} {RNA1310_7071, RNA1509_34189} {RNA1509_34189, RNA815_18304} |
Berezikov Lab - 2020-2021 © ERIBA